Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011396_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:149473967:149475758:1 gene:Zm00001d011396 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTPase activating protein%3B Putative calcium-dependent lipid-binding (CaLB domain) family protein

Sequence

ATGGTGGGGAAGAAGAGGGGTGTTATCTCCCCGCTGGACCATCTCGCTGGGCTGCTGGAG
GTGCGCGTGGTGAGGGGAGTGGACCTCGCCATCCGCGACCTCCGATCCAGCGACCCCTAC
GTCGTCCTTCGCATCGGCAAGGCGCAGAAAGTGAAGACGCGAGTGGTCAAGAAGAGCATC
AATCCGGAATGGAACGAAAAACTCACCCTCTCTATTGAAGACCCTGCCGTTCCTATTAGA
CTGGAAGTATTTGACAAGGACACTTTCGTTGATGATGCAATGGGTAACGCGGAGCTGGAC
ATCCGCCCGTTAGTCGAGATTGTGAAGATGAAGCTCCAGGGTGTCGCTGACAAAACGGTG
GTAAAGAAGCTGGTGCCCAACAGACAGAACTGCCTAGCCGAGGAGAGCTCCATATACATA
TCGGAGGGGAAGGTGAAGCAAGACCTGGTCGTACGGCTAAGGAACGTAGAGTGTGGCGAA
ATCGAGCTCCAACTTCAGTGGGTCCACCTCCCTGGCTCTAAGGGTGTATGA

Peptide Sequence

PEP ID

Zm00001d011396_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:149473967:149475758:1 gene:Zm00001d011396 transcript:Zm00001d011396_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTPase activating protein%3B Putative calcium-dependent lipid-binding (CaLB domain) family protein

Sequence

MVGKKRGVISPLDHLAGLLEVRVVRGVDLAIRDLRSSDPYVVLRIGKAQKVKTRVVKKSI
NPEWNEKLTLSIEDPAVPIRLEVFDKDTFVDDAMGNAELDIRPLVEIVKMKLQGVADKTV
VKKLVPNRQNCLAEESSIYISEGKVKQDLVVRLRNVECGEIELQLQWVHLPGSKGV

Transcript Sequence

Transcript ID

Zm00001d011396_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:149473967:149475758:1 gene:Zm00001d011396 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTPase activating protein%3B Putative calcium-dependent lipid-binding (CaLB domain) family protein

Sequence

AATAATATAACCACAGAAATCCATCGACGAACAACTGAGAAGAGCTGCGCCTGCGCCTGC
GCCTGCGGGAAAGGGAGAACATGGTGGGGAAGAAGAGGGGTGTTATCTCCCCGCTGGACC
ATCTCGCTGGGCTGCTGGAGGTGCGCGTGGTGAGGGGAGTGGACCTCGCCATCCGCGACC
TCCGATCCAGCGACCCCTACGTCGTCCTTCGCATCGGCAAGGCGCAGAAAGTGAAGACGC
GAGTGGTCAAGAAGAGCATCAATCCGGAATGGAACGAAAAACTCACCCTCTCTATTGAAG
ACCCTGCCGTTCCTATTAGACTGGAAGTATTTGACAAGGACACTTTCGTTGATGATGCAA
TGGGTAACGCGGAGCTGGACATCCGCCCGTTAGTCGAGATTGTGAAGATGAAGCTCCAGG
GTGTCGCTGACAAAACGGTGGTAAAGAAGCTGGTGCCCAACAGACAGAACTGCCTAGCCG
AGGAGAGCTCCATATACATATCGGAGGGGAAGGTGAAGCAAGACCTGGTCGTACGGCTAA
GGAACGTAGAGTGTGGCGAAATCGAGCTCCAACTTCAGTGGGTCCACCTCCCTGGCTCTA
AGGGTGTATGAGAAGAGTTATGAGCGCTGCCTAGCTTGCACTGCTCAGGTTCTTCGCTTC
ACATTAAAGTAATCTATTTGAACTGTAGTTGTAATCTATAGAGATAAAAGCAGTGTAAAA
ATAGTAGAAATCGTTATGGATTAAAGACAGTCGACCCAGCTCTTGCTAGTTGAAAAGAAC
CCAGCTCTTGCCATTTGACATGTTGATCATGTAGCGGTAGCCGAAGAGGATGCAATCCTA
AATGGCCCATGTGCATTATAGTTCTATCAAATAGTTATATTTTT