Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011392_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:8:149387711:149392117:1 gene:Zm00001d011392 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase%2C isoform 2%3B Putative calcium-dependent protein kinase family protein isoform 1%3B Putative calcium-dependent protein kinase family protein isoform 2
Sequence	ATGGGCAACCGTGCGTCGCGCCACCACCGCCAAGCCGCCGAGCAGCAACCGGCGACGCCG ACCCTGCCGAAGCCCCAGCCCCAGATCCAGCCGCCGCCTCCGCCTCCGCCGACGCAGACG CAGCAGTACCAGCAGGCGCCGCCGCAGTCGCAGCAGAAGCCGAAGCCGGCGGCGGACGTG GGGGCGGTGGGGCGCGTGCTGGGGCGGCCCATGGAGGACGTGCGCGCGACCTACACTTTC GGCCGCGAGCTCGGGCGGGGCCAGTTCGGGGTCACCTACCTCGTCACGCACTCGGAGACC GGGCAGCGCTTCGCCTGCAAGTCCATCGCCACGCGGAAGCTCGTCCACCGCGACGACATT GAGGACGTGCGCCGGGAGGTGCAGATCATGCACCACCTCACGGGCCACCGCAACATCGTC GAGCTCCGGGGAGCATACGAGGACAGGCACTCGGTCAACCTTGTTATGGAGCTCTGCGAG GGCGGGGAGCTCTTCGACCGCATCATAGCCAAGGGCCACTACACCGAGCGAGCCGCCGCC TCGCTCTGCCGCGAGATCGTCGCCGTCGTCCACAGCTGCCACTCCATGGGGGTCTTCCAT CGGGATCTCAAGCCCGAGAACTTCCTGTTCCTCAATAACAAGGAGGACTCCCCGCTCAAG GCCACGGACTTCGGTCTCTCCGTCTTCTTCAAGCACGGGGAGACGTTTAAGGATCTTGTG GGAAGTGCATATTATGTTGCTCCTGAGGTACTGAAACGGAAATATGGGGCAGAGGCTGAC ATATGGAGTGCTGGGGTCATTCTTTACATCCTTCTGTCTGGTGTTCCTCCTTTTTGGGCA GAGAATGAGGATGGCATATTTGATGCTGTCTTGCGCGGTCACATCGATTTCTCTTCTGAC CCTTGGCCTTCAATATCCAATGGTGCAAAGGATTTGGTTAAGAAGATGCTGCGACAAGAC CCAAAAGAACGCCTGACTGCTGCTGAAATTTTGAGTAAGACAACTGTGCTTCTATTGCTT TGCATGCTAGTTGTGGAATCACATTTTATAGTATTCTCATGTGTAGAGAATAAACACTCA TGTAGTAAATTTGTATCAAATGGGAGCAATCATTCCTCCTAA

Peptide Sequence

PEP ID	Zm00001d011392_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:8:149387711:149392117:1 gene:Zm00001d011392 transcript:Zm00001d011392_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase%2C isoform 2%3B Putative calcium-dependent protein kinase family protein isoform 1%3B Putative calcium-dependent protein kinase family protein isoform 2
Sequence	MGNRASRHHRQAAEQQPATPTLPKPQPQIQPPPPPPPTQTQQYQQAPPQSQQKPKPAADV GAVGRVLGRPMEDVRATYTFGRELGRGQFGVTYLVTHSETGQRFACKSIATRKLVHRDDI EDVRREVQIMHHLTGHRNIVELRGAYEDRHSVNLVMELCEGGELFDRIIAKGHYTERAAA SLCREIVAVVHSCHSMGVFHRDLKPENFLFLNNKEDSPLKATDFGLSVFFKHGETFKDLV GSAYYVAPEVLKRKYGAEADIWSAGVILYILLSGVPPFWAENEDGIFDAVLRGHIDFSSD PWPSISNGAKDLVKKMLRQDPKERLTAAEILSKTTVLLLLCMLVVESHFIVFSCVENKHS CSKFVSNGSNHSS

Transcript Sequence

Transcript ID	Zm00001d011392_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:149387711:149392117:1 gene:Zm00001d011392 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase%2C isoform 2%3B Putative calcium-dependent protein kinase family protein isoform 1%3B Putative calcium-dependent protein kinase family protein isoform 2
Sequence	AAGCAGACATGGGCAACCGTGCGTCGCGCCACCACCGCCAAGCCGCCGAGCAGCAACCGG CGACGCCGACCCTGCCGAAGCCCCAGCCCCAGATCCAGCCGCCGCCTCCGCCTCCGCCGA CGCAGACGCAGCAGTACCAGCAGGCGCCGCCGCAGTCGCAGCAGAAGCCGAAGCCGGCGG CGGACGTGGGGGCGGTGGGGCGCGTGCTGGGGCGGCCCATGGAGGACGTGCGCGCGACCT ACACTTTCGGCCGCGAGCTCGGGCGGGGCCAGTTCGGGGTCACCTACCTCGTCACGCACT CGGAGACCGGGCAGCGCTTCGCCTGCAAGTCCATCGCCACGCGGAAGCTCGTCCACCGCG ACGACATTGAGGACGTGCGCCGGGAGGTGCAGATCATGCACCACCTCACGGGCCACCGCA ACATCGTCGAGCTCCGGGGAGCATACGAGGACAGGCACTCGGTCAACCTTGTTATGGAGC TCTGCGAGGGCGGGGAGCTCTTCGACCGCATCATAGCCAAGGGCCACTACACCGAGCGAG CCGCCGCCTCGCTCTGCCGCGAGATCGTCGCCGTCGTCCACAGCTGCCACTCCATGGGGG TCTTCCATCGGGATCTCAAGCCCGAGAACTTCCTGTTCCTCAATAACAAGGAGGACTCCC CGCTCAAGGCCACGGACTTCGGTCTCTCCGTCTTCTTCAAGCACGGGGAGACGTTTAAGG ATCTTGTGGGAAGTGCATATTATGTTGCTCCTGAGGTACTGAAACGGAAATATGGGGCAG AGGCTGACATATGGAGTGCTGGGGTCATTCTTTACATCCTTCTGTCTGGTGTTCCTCCTT TTTGGGCAGAGAATGAGGATGGCATATTTGATGCTGTCTTGCGCGGTCACATCGATTTCT CTTCTGACCCTTGGCCTTCAATATCCAATGGTGCAAAGGATTTGGTTAAGAAGATGCTGC GACAAGACCCAAAAGAACGCCTGACTGCTGCTGAAATTTTGAGTAAGACAACTGTGCTTC TATTGCTTTGCATGCTAGTTGTGGAATCACATTTTATAGTATTCTCATGTGTAGAGAATA AACACTCATGTAGTAAATTTGTATCAAATGGGAGCAATCATTCCTCCTAATTTATTCCAA ATTTTGTGCCTTTTGATGATCTCTCCAGTTGAAAATACATGTTGTTTTAGAATTCCTCAT GGTCAAACTTCTTTTAACTTTGACCGTTAATATATAAAGATGTGAGCTAGATGTCATTAG GTTTACCAGGGAAAGTCCTTCAAAGTATTTATCATCTTTATTCGAAATTTCATATTTTAT AGAAATTGTAGACCAAAGTTTCACCTAAATGACATGTAGTTTGCATCAGAGAGTACAAGA GTGCTAAAGCACTATAACAGTTACATAATTCCAGAAAGAAACTGCTGATTTCTCTATCTT TATTTCAATACATGTCTGCTTTCTCTTTCTCTCTCTTTCTAAAAAAGGAACCTATCTTCT TTCCACATGAACTGAGTATTCATTCACAAATGTTGTTTATCAGTCTAATATTGTGAGCAT ACAGACCACCCATGGATTAGAGAGGATGGAGAGGCCCCAGATAAGCCACTTGACATTACT GTCATTGGTAGAATGAAACAGTTCAGGGCAATGAACAAGCTCAAGAAAGTTGCATTGAAG GTTGTGGCTGAGAACTTATCAGATGAAGAGATTATGGGCCTAAAAGAAATGTTCAGATCC CTGGATACAGATAACAGTGGGACAATTACTCTTGAAGAGCTAAGATCTGGTTTACCAAAA CTTGGTACAAAAATTTCTGAATCAGAAATTAAACAATTGATGGAGGCGGTATGTTCATAC CCATACCCATATGCTTCTTTTGTTTCTGTTGATGCATAATTTCCTTGAGTAATTCTTTTT TCTCTTAAGAATTACTATCCCAATTCCGAATCATATATCCCACTTGGAAAACTGAAAGCA ACTGTCTAGGACTGCATTGAACATTTGACTCCACATTCTTTTCCTGTTTTCAAGTATTTT TTTTTACAGTTTGTGGTGCTTTCTAATGAATGAATAACAATCACAATTATTTGAAAGGAA ACATGGGGAGTAACCAACATGTGAAACTGCATGGGGAGTAACCAACATGTGAAACTATTA TAGATGTATCAAACATCTGGACATTGTTGATGGGACTATTGTAGTAGTTTAGCACATACT ATTATGTTTTGTTTATTCATGTTTTTAATTCCATGAACAGGCTGATGTTGATGGAAATGG TACCATTGATTATGCGGAGTTTATATCAGCCACAATGCATTTGAATAGATTGGAGAAGGA AGACCACATACTCAAAGCTTTTGAATATTTCGATAAGGATCACAGCGGATACATAACCGT AGATGAGTTGGAAGAAGCTTTGAAGAAGTATGATATGGGAGATGACAAAACTATAAAAGA AATCATTGCTGAAGTAGATACAGATCATGATGGAAGAATTAATTACCAGGAGTTTGTTGC CATGATGAGGAACAACAGCCCTGAGATTGTTCCAAATCGGAGGCGCATGTTCTAACTGTC ATGGACAATCACATTGAATACTTTCAAGAACAATCTGCCCTTAGACATAATCTTTGTCCC ATTTTCTTTTTGGAACAGCCGTTAAGAAGACTCCTTAATTTGAGATCCATGTCTCTGCTG CCCGGACCTGTTTGTCCCAAAATAGGGTGGTGTTATAGTGATTCGTACTTGATGCTTTGA GCTTCATGGACTCTTGCGTGGCAATGTTTATCCCCATTGTACGTCTGGTTGTTCTGCTGC TTCGATCTGAGGCTTTCTTTAGGTGTAAACGGATATCTGAATTATTAGGATAAATTTAAT ATTTT