Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011377_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:148947113:148951007:-1 gene:Zm00001d011377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Jasmonic acid-amido synthetase JAR1
Sequence	ATGACAATCTGCAGTAGTGAAGAAATCATTGATGAGTTTGAGTTGCTAACGCGTGATGCT AGGCGCGTGCAGCAGGATACACTGAGAAAGATTCTTGAACTGAATGGTGATGCCGAATAT CTGAATCGCTTCAATCTTGGAAGGAGAACAGACTCAAAGAGCTTTAAATCCTGCATTCCT CTATGTGTGCATAGTGACATAGAGTCCTACATCCAGAGGATAGCGGATGGAGATGACTCG CCGGTGCTAACTGGGAAGCCCATCACTTCCCTCTCCTTAAGTTCTGGTACGACGCAGGGG AAACCCAAGTTTTTGCCATTCAACGATGAATTGCTTGAGAGTACATTTCAAATATTCCGA ACCTCATATGCCTTTAGAAATCGTGAATATCCTATTGTCAATGGAAAAGCCCTGCAGTTT GTTTACGGTAGCAAGCAAGTCTTTACCCAAGGGGGCATTCTTGCGGCGACTGCGACGACA AATCTGTACAGGAGTCAACGTTTCAAGGAAGCGATGAAGGACGTCATGACTCAGTGCTGC AGTCCTGATGAAGTCATCTTTGGTCCTGACTTCCATCAGTCTTTGTACTGCCATCTATTG TGTGGGTTAATCAACTCAGACGAAGTCCAGTTTGTTTTCTCACCGTTTGCGCACAGCCTC GTCCATGCATTTCACAGTCTCGAGGAGGTATGGGAAGATCTGTGTGCTGACATAAGAGAT GGTGTTCTCTCAAAGAGAGTCACCGCGCCATCTATCCGCCAAGCTGTTTCGAAGATCTTG AGGCCGAATCCTGAGCTGGCTAGCTCCATTTACATCAAGTGCCAGAGCTTGAGCAATTGG TATGGGGTGATCCCAACACTGTGGCCAAACGTGAAGTACATCTATGGCATTATGACGGGG TCCATGGAGCCATACCTGAAGAAATTGAGACACTATGCTGGTCACTTGCCGCTGCTGAGT GCTGATTATGGTGCATCTGAAGGATGGGTCGGCTCTAATATAAACCCAACCCTGCCACCT GAGGAGGTGACGTACGCTGTTCTTCCTAACATTGCTTATTTCGAGTTCATTCCTCTGGAA AAACCAAAATGGGAAGAAACGGAGATCTGTTCCTCTGTTCACTACATAGAGTCGGAGCCT GTAGGCCTAACTGAGGTTGAGGTTGGCAAAATCTACGAAGTTGTAATAACAAATTTTGCA GGTCTATACCGATACAGACTGGGAGATATTGTGAAGATAGCAGGCTTCCACAACGCAACA CCAGAGCTCCAGTTCATCTGCCGGAGAAGCCTAGTCCTCAGCGTCAACATCGACAAGAAC ACAGAGAAAGATCTGCAGCTGGCCGTGGAAGCCGCGGAGAAGCTCTTGGCCGCGGAGAAG CTGGAGGTGGTGGACTTCACGAGCCTCGTGGACAGGTCGAGCGAGCCAGGGCACTACGTC ATCTTCTGGGAGCTGAGCTCCGACGACGGCGCCAGCGAAGACGTCCTGAGCGGCTGCGCG AGCTGCATGGACCTGGCCTTCGCGGACGCGGGGTACGTCGGGTCGAGGAAGACCCAGACC ATCGGCGCCCTCGAGCTCCGGGTCCTCCGGAAGGGAGCCTTCGCGCAGGTCATGAACCAC TACCTGAGCCTCGGCGGCGCCGTCAGCCAGTTCAAGACGCCGCGGTTCGTGAGCCAGTCC AACAGCAAGGTGCTGCAGATACTGAGCCGGAACGTCACCCGGAGCTACTTCAGCACTGCG TATGGGCTCTGA

Peptide Sequence

PEP ID	Zm00001d011377_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:148947113:148951007:-1 gene:Zm00001d011377 transcript:Zm00001d011377_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Jasmonic acid-amido synthetase JAR1
Sequence	MTICSSEEIIDEFELLTRDARRVQQDTLRKILELNGDAEYLNRFNLGRRTDSKSFKSCIP LCVHSDIESYIQRIADGDDSPVLTGKPITSLSLSSGTTQGKPKFLPFNDELLESTFQIFR TSYAFRNREYPIVNGKALQFVYGSKQVFTQGGILAATATTNLYRSQRFKEAMKDVMTQCC SPDEVIFGPDFHQSLYCHLLCGLINSDEVQFVFSPFAHSLVHAFHSLEEVWEDLCADIRD GVLSKRVTAPSIRQAVSKILRPNPELASSIYIKCQSLSNWYGVIPTLWPNVKYIYGIMTG SMEPYLKKLRHYAGHLPLLSADYGASEGWVGSNINPTLPPEEVTYAVLPNIAYFEFIPLE KPKWEETEICSSVHYIESEPVGLTEVEVGKIYEVVITNFAGLYRYRLGDIVKIAGFHNAT PELQFICRRSLVLSVNIDKNTEKDLQLAVEAAEKLLAAEKLEVVDFTSLVDRSSEPGHYV IFWELSSDDGASEDVLSGCASCMDLAFADAGYVGSRKTQTIGALELRVLRKGAFAQVMNH YLSLGGAVSQFKTPRFVSQSNSKVLQILSRNVTRSYFSTAYGL

Transcript Sequence

Transcript ID	Zm00001d011377_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:148947113:148951007:-1 gene:Zm00001d011377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Jasmonic acid-amido synthetase JAR1
Sequence	ATACACTGGGATTCTGAACTTTCTTACTGGCACTCCGAGAGGAGGCGATATCCGATATGC CGATGTACTCCATGCTCGATGAACGAGTGGGACCTTCCTCTTAAGCACAGCACAAGCAGC TACAAGGTTCTGACCTACAAGTTCCAATGACAATCTGCAGTAGTGAAGAAATCATTGATG AGTTTGAGTTGCTAACGCGTGATGCTAGGCGCGTGCAGCAGGATACACTGAGAAAGATTC TTGAACTGAATGGTGATGCCGAATATCTGAATCGCTTCAATCTTGGAAGGAGAACAGACT CAAAGAGCTTTAAATCCTGCATTCCTCTATGTGTGCATAGTGACATAGAGTCCTACATCC AGAGGATAGCGGATGGAGATGACTCGCCGGTGCTAACTGGGAAGCCCATCACTTCCCTCT CCTTAAGTTCTGGTACGACGCAGGGGAAACCCAAGTTTTTGCCATTCAACGATGAATTGC TTGAGAGTACATTTCAAATATTCCGAACCTCATATGCCTTTAGAAATCGTGAATATCCTA TTGTCAATGGAAAAGCCCTGCAGTTTGTTTACGGTAGCAAGCAAGTCTTTACCCAAGGGG GCATTCTTGCGGCGACTGCGACGACAAATCTGTACAGGAGTCAACGTTTCAAGGAAGCGA TGAAGGACGTCATGACTCAGTGCTGCAGTCCTGATGAAGTCATCTTTGGTCCTGACTTCC ATCAGTCTTTGTACTGCCATCTATTGTGTGGGTTAATCAACTCAGACGAAGTCCAGTTTG TTTTCTCACCGTTTGCGCACAGCCTCGTCCATGCATTTCACAGTCTCGAGGAGGTATGGG AAGATCTGTGTGCTGACATAAGAGATGGTGTTCTCTCAAAGAGAGTCACCGCGCCATCTA TCCGCCAAGCTGTTTCGAAGATCTTGAGGCCGAATCCTGAGCTGGCTAGCTCCATTTACA TCAAGTGCCAGAGCTTGAGCAATTGGTATGGGGTGATCCCAACACTGTGGCCAAACGTGA AGTACATCTATGGCATTATGACGGGGTCCATGGAGCCATACCTGAAGAAATTGAGACACT ATGCTGGTCACTTGCCGCTGCTGAGTGCTGATTATGGTGCATCTGAAGGATGGGTCGGCT CTAATATAAACCCAACCCTGCCACCTGAGGAGGTGACGTACGCTGTTCTTCCTAACATTG CTTATTTCGAGTTCATTCCTCTGGAAAAACCAAAATGGGAAGAAACGGAGATCTGTTCCT CTGTTCACTACATAGAGTCGGAGCCTGTAGGCCTAACTGAGGTTGAGGTTGGCAAAATCT ACGAAGTTGTAATAACAAATTTTGCAGGTCTATACCGATACAGACTGGGAGATATTGTGA AGATAGCAGGCTTCCACAACGCAACACCAGAGCTCCAGTTCATCTGCCGGAGAAGCCTAG TCCTCAGCGTCAACATCGACAAGAACACAGAGAAAGATCTGCAGCTGGCCGTGGAAGCCG CGGAGAAGCTCTTGGCCGCGGAGAAGCTGGAGGTGGTGGACTTCACGAGCCTCGTGGACA GGTCGAGCGAGCCAGGGCACTACGTCATCTTCTGGGAGCTGAGCTCCGACGACGGCGCCA GCGAAGACGTCCTGAGCGGCTGCGCGAGCTGCATGGACCTGGCCTTCGCGGACGCGGGGT ACGTCGGGTCGAGGAAGACCCAGACCATCGGCGCCCTCGAGCTCCGGGTCCTCCGGAAGG GAGCCTTCGCGCAGGTCATGAACCACTACCTGAGCCTCGGCGGCGCCGTCAGCCAGTTCA AGACGCCGCGGTTCGTGAGCCAGTCCAACAGCAAGGTGCTGCAGATACTGAGCCGGAACG TCACCCGGAGCTACTTCAGCACTGCGTATGGGCTCTGATCGACGATGCTACGGCGCTACG CACCAAGTACTGGTAATAGGCTGGAAGTATAGTGATCGAGAGTGCATGGCGCACGACGAC GATCCATCATGCTGGGAGCCTGGGAGTTGCACGACGACTGACAGATGTATCATATAATTG TCAGTGTAAATATAGCTGTTCGACAGTGTATGTAGGCGAAGGTTGCTGCGTTCCGTTTAG CAGCCGTGTCATCGCTCAAGAAAACTCAGAAAGATCACATGTGTTCTGATTTCTGAATCA AAAAGCTGTGTACAAGAAGCAGCGAACTCACTC