Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011366_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:8:148703104:148711327:-1 gene:Zm00001d011366 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 11 chloroplastic/mitochondrial
Sequence

ATGAGCGCGCTCCAGGCCTCCCTCCTCCTCCGCCCGCTCTTTTCGCCACTGCCCCCACGC
CGCCGGCAGCTGCTCTCCTCCGCCTCCTTCTCTTTCCCCCGCGGCGCCCACGCGCCCCGC
CTCCGCGCATTGGTCCCCGGCGCGCCGCAGCCCGACGCCGCCGAGCCGCCCGCGATTGCA
TCCTCGGCGGCGGCGGCGGCGGCGGCGGAGGCTGAGCCGGAGGCGGAGCCCACGACGGCG
GCAGCTCAGCCCGTCGCGATGAGCGCGAAGGAGGGGCTGGAGGACATGGTGGACAAGGCT
AGGGCCTGGGCCGTGGCGGTCGCGGCCGCGGTGTTAGCCGCGGCCAGGAGGTTCGTCGAC
TGGGTGCTGTCGAGGGACTGGATGGGCTGGTGGCCTTTCTGGAGATCCGAGCACCGGCTG
CAGCGCTTGATCGACGAGGCGGACGCCAACCCCAACGACGCGGCCAAGCAGAGCGCGCTC
CTGCACGAGCTCAACAAGTTAAGCCCTGAAGATGTCATTAAAAGGTTTGAGGAGCGAAGC
CATGCTGTGGATAGCAGGGGGGCTGCAGAGTACCTGCGGGCACTTATTCTCACTAACACT
ATAGCAGATTACCTTCCAGATGAACAATCTGGGAGGTCTGCAAGCCTGCCAGCCCTGTTG
CAAGAGTTGAAACAACGTGTATCTGGGAATGAGGACAAACCTTTCATGAACCCTGGGATA
TCAGAAAAGCAACCTTTACATGTTGTAATGGTTGACCCCAAATCTACAGGTAGATCAACA
CGTTTTGCTCAAGAAATCTTCTCAACGATCTTGTTTACAATTGCTGTTGGCGTAATGTGG
GTGATGGGTGCTGCTGCACTTCAAAAATATATTGGGAGCTTAGGTGGAATTGGGGCATCT
GGTGCTGGTTCTAGCTCATCATATTCTCCAAAAGAGATGAATAAGGATATGATGCCAGAG
AAGAATGTCAAGACATTTAAAGATGTCAAAGGTTGTGATGATGCAAAAAAGGAACTTGAG
GAAGTAGTTGAGTATCTCAAGAACCCTTCAAAGTTCACTCGCCTTGGTGGAAAGCTACCT
AAGGGCATACTTTTGACTGGTGCTCCAGGAACTGGGAAGACACTACTAGCAAAGGCCATT
GCTGGAGAAGCTGGCGTACCATTCTTTTACCGAGCAGGTTCTGAATTTGAGGAAATGTTT
GTTGGTGTTGGTGCTCGGAGAGTGAGGTCATTGTTTCAAGCTGCAAAGAAGAAGGCACCA
TGCATTGTTTTCATTGATGAAATAGATGCTGTGGGATCAACTAGGAAACAGTGGGAAGGG
CACACAAAGAAGACATTGCATCAACTTCTTGTTGAGATGGATGGGTTTGAACAAAATGAG
GGAATAATTGTGATGGCTGCAACAAACTTGCCAGACATTCTTGATCCTGCACTCACAAGA
CCTGGTAGATTTGATAGGCATATTGTTGTCCCAAGTCCAGATGTGCGGGGTCGCCAAGAG
ATTCTGGAGCTCTATTTGCAAGATAAGCCAGTGGCAAATGATGTAGATATCAATGCAATT
GCCCGAAGTACACCAGGCTTTAATGGGGCTGACCTAGCCAACCTTGTAAACATTGCAGCG
ATAAAGGCTGCGGTTGAAGGTGCGGATAAATTGAATGCTGTTCAGTTGGAGTTTGCCAAA
GATCGTATTATCATGGGAACCGAGAGGAGATCAATGTTCATATCTGATGAATCGAGAAAG
CTTACTGCCTACCATGAAAGTGGACATGCTATTGTTGCACTCAACACCCAGGGTGCTCAC
CCCATACACAAGGCAACTATCCTTCCTCGTGGGTCTGCCCTTGGAATGGTCACACAACTC
CCCTCACAGGATGAGACCTCTATTAGCAAGAAACAACTCCTTGCACGTCTTGATGTTTGC
ATGGGTGGGAGGGTTGCTGAAGAGCTGATCTTTGGGGAAGACAATGTTACAACTGGGGCA
AGAAATGACCTTCACACTGCAACGGAGCTTGCCCAGTACATGGTATCGAACTGTGGGATG
AGTGATGCTATCGGTCCTGTGCATGTGAAAGAACGACCAAGCATAGAGATGCAATCAAGG
ATAGATGCTGAGGTGGTGAAGCTCCTAAGAGAGGCTTATGGGCGGGTCAAGCGATTGCTT
AGGAAGCATGAGAAGCAATTACATGCTCTAGCAAATGCGCTGCTGGAGCGTGAAACGCTT
ACTGCAGATGAGATCAACAAAGTAGTTCACCCTTACCAAGAAGAGCCCCATCTTTCCTTC
CAAGACGAGGAGTTTGCCCTCGCTTAA

Peptide Sequence

PEP ID

Zm00001d011366_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:8:148703104:148711327:-1 gene:Zm00001d011366 transcript:Zm00001d011366_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 11 chloroplastic/mitochondrial
Sequence

MSALQASLLLRPLFSPLPPRRRQLLSSASFSFPRGAHAPRLRALVPGAPQPDAAEPPAIA
SSAAAAAAAEAEPEAEPTTAAAQPVAMSAKEGLEDMVDKARAWAVAVAAAVLAAARRFVD
WVLSRDWMGWWPFWRSEHRLQRLIDEADANPNDAAKQSALLHELNKLSPEDVIKRFEERS
HAVDSRGAAEYLRALILTNTIADYLPDEQSGRSASLPALLQELKQRVSGNEDKPFMNPGI
SEKQPLHVVMVDPKSTGRSTRFAQEIFSTILFTIAVGVMWVMGAAALQKYIGSLGGIGAS
GAGSSSSYSPKEMNKDMMPEKNVKTFKDVKGCDDAKKELEEVVEYLKNPSKFTRLGGKLP
KGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAP
CIVFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTR
PGRFDRHIVVPSPDVRGRQEILELYLQDKPVANDVDINAIARSTPGFNGADLANLVNIAA
IKAAVEGADKLNAVQLEFAKDRIIMGTERRSMFISDESRKLTAYHESGHAIVALNTQGAH
PIHKATILPRGSALGMVTQLPSQDETSISKKQLLARLDVCMGGRVAEELIFGEDNVTTGA
RNDLHTATELAQYMVSNCGMSDAIGPVHVKERPSIEMQSRIDAEVVKLLREAYGRVKRLL
RKHEKQLHALANALLERETLTADEINKVVHPYQEEPHLSFQDEEFALA

Transcript Sequence

Transcript ID

Zm00001d011366_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:148703104:148711327:-1 gene:Zm00001d011366 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 11 chloroplastic/mitochondrial
Sequence

AAAGGGAAAAGAAAAAGGGGAAGAAGCCCCTCGCTCCAAGTCACGCGCCTCCCGCCTCGC
CGGCGCCGCCCGCCCGCCCGCCTCGCCCGCCATGAGCGCGCTCCAGGCCTCCCTCCTCCT
CCGCCCGCTCTTTTCGCCACTGCCCCCACGCCGCCGGCAGCTGCTCTCCTCCGCCTCCTT
CTCTTTCCCCCGCGGCGCCCACGCGCCCCGCCTCCGCGCATTGGTCCCCGGCGCGCCGCA
GCCCGACGCCGCCGAGCCGCCCGCGATTGCATCCTCGGCGGCGGCGGCGGCGGCGGCGGA
GGCTGAGCCGGAGGCGGAGCCCACGACGGCGGCAGCTCAGCCCGTCGCGATGAGCGCGAA
GGAGGGGCTGGAGGACATGGTGGACAAGGCTAGGGCCTGGGCCGTGGCGGTCGCGGCCGC
GGTGTTAGCCGCGGCCAGGAGGTTCGTCGACTGGGTGCTGTCGAGGGACTGGATGGGCTG
GTGGCCTTTCTGGAGATCCGAGCACCGGCTGCAGCGCTTGATCGACGAGGCGGACGCCAA
CCCCAACGACGCGGCCAAGCAGAGCGCGCTCCTGCACGAGCTCAACAAGTTAAGCCCTGA
AGATGTCATTAAAAGGTTTGAGGAGCGAAGCCATGCTGTGGATAGCAGGGGGGCTGCAGA
GTACCTGCGGGCACTTATTCTCACTAACACTATAGCAGATTACCTTCCAGATGAACAATC
TGGGAGGTCTGCAAGCCTGCCAGCCCTGTTGCAAGAGTTGAAACAACGTGTATCTGGGAA
TGAGGACAAACCTTTCATGAACCCTGGGATATCAGAAAAGCAACCTTTACATGTTGTAAT
GGTTGACCCCAAATCTACAGGTAGATCAACACGTTTTGCTCAAGAAATCTTCTCAACGAT
CTTGTTTACAATTGCTGTTGGCGTAATGTGGGTGATGGGTGCTGCTGCACTTCAAAAATA
TATTGGGAGCTTAGGTGGAATTGGGGCATCTGGTGCTGGTTCTAGCTCATCATATTCTCC
AAAAGAGATGAATAAGGATATGATGCCAGAGAAGAATGTCAAGACATTTAAAGATGTCAA
AGGTTGTGATGATGCAAAAAAGGAACTTGAGGAAGTAGTTGAGTATCTCAAGAACCCTTC
AAAGTTCACTCGCCTTGGTGGAAAGCTACCTAAGGGCATACTTTTGACTGGTGCTCCAGG
AACTGGGAAGACACTACTAGCAAAGGCCATTGCTGGAGAAGCTGGCGTACCATTCTTTTA
CCGAGCAGGTTCTGAATTTGAGGAAATGTTTGTTGGTGTTGGTGCTCGGAGAGTGAGGTC
ATTGTTTCAAGCTGCAAAGAAGAAGGCACCATGCATTGTTTTCATTGATGAAATAGATGC
TGTGGGATCAACTAGGAAACAGTGGGAAGGGCACACAAAGAAGACATTGCATCAACTTCT
TGTTGAGATGGATGGGTTTGAACAAAATGAGGGAATAATTGTGATGGCTGCAACAAACTT
GCCAGACATTCTTGATCCTGCACTCACAAGACCTGGTAGATTTGATAGGCATATTGTTGT
CCCAAGTCCAGATGTGCGGGGTCGCCAAGAGATTCTGGAGCTCTATTTGCAAGATAAGCC
AGTGGCAAATGATGTAGATATCAATGCAATTGCCCGAAGTACACCAGGCTTTAATGGGGC
TGACCTAGCCAACCTTGTAAACATTGCAGCGATAAAGGCTGCGGTTGAAGGTGCGGATAA
ATTGAATGCTGTTCAGTTGGAGTTTGCCAAAGATCGTATTATCATGGGAACCGAGAGGAG
ATCAATGTTCATATCTGATGAATCGAGAAAGCTTACTGCCTACCATGAAAGTGGACATGC
TATTGTTGCACTCAACACCCAGGGTGCTCACCCCATACACAAGGCAACTATCCTTCCTCG
TGGGTCTGCCCTTGGAATGGTCACACAACTCCCCTCACAGGATGAGACCTCTATTAGCAA
GAAACAACTCCTTGCACGTCTTGATGTTTGCATGGGTGGGAGGGTTGCTGAAGAGCTGAT
CTTTGGGGAAGACAATGTTACAACTGGGGCAAGAAATGACCTTCACACTGCAACGGAGCT
TGCCCAGTACATGGTATCGAACTGTGGGATGAGTGATGCTATCGGTCCTGTGCATGTGAA
AGAACGACCAAGCATAGAGATGCAATCAAGGATAGATGCTGAGGTGGTGAAGCTCCTAAG
AGAGGCTTATGGGCGGGTCAAGCGATTGCTTAGGAAGCATGAGAAGCAATTACATGCTCT
AGCAAATGCGCTGCTGGAGCGTGAAACGCTTACTGCAGATGAGATCAACAAAGTAGTTCA
CCCTTACCAAGAAGAGCCCCATCTTTCCTTCCAAGACGAGGAGTTTGCCCTCGCTTAAAG
ATTCTTTTGTTGCATCAAGATATCGGTCACCACCCGTGAATTGTAAATCCGTGTACAGTA
AGTGGCGCCTAGATGAGCCATGGAAGTTCCTTCAGATGCCCTCTTCTGTAAAACAGCGCG
AAACACCTATGGTAAATT