Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011347_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:8:147387413:147393769:-1 gene:Zm00001d011347 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy7 description:Autophagy 7%3B Autophagy-related 7
Sequence	ATGTTCTCCTGTTGTTTCTGTTTTATACTTTATTATGGGCCCTTCATGTTCAGTTTTATT CTTTTTCAGCCAATTTCTTATGAAACACTACCTGGACTTACCTCAGTTGCATCTGGCAAA GCAGTGGAGCTCTTTGCTAGGATGTTACATCATCCTGACGAGATACGGGCCCCAGGCGAT ACTGCTGGTACAGAAACAGAACATCAACTTGGTCTATTGCCACATCAGCTACGAGGATCA CTCCCCAAGTGTGATTTATTTGTGGAGCTCAACAATTCCTCAGTCAACTGTACTGCATGT TCTGTTGCTGTATTGTCGGAGTATAGAAGAAGAGGATTGGATTTTGTCATGCAGGCTATC AACTATCCAGCATATCTGAAAGATTTTACAGGCATTTCTGATTCGAAAAGACCAGATACT TGTCCTAAAATACCGCCCAACATCTCTGTAAATTCAGACAAGATTTCTGATGTCCGATGT CTACTATTGGGTGCTGGAACTCTTGGATGTGATGTCGCTCGCATTCTTATGGACTGTGGT GTACGGAAGATAACAGTAGTTGATAGTGGTCATGTAGTTGTGTCAAATTTAGCGAGACAA TCACTCTATACTTCTGATGACCGTGGTGCTCCAAAAGCAACTGCAATACTTAGGCATCTA GTGGAGAGATGTCCTTCAGTGGATGCACAAGGCATTAAAATGGAAATACCTATGCCTGGG CATCCTGTGTCTCCTGGTGAAGCAGCGGGTGTGCTCCAAGATTGCGAGCGCCTTAAGGAA TTGGTGTTGTCCCACGATGCTATCTTCTTGTTGACCGACACAAGAGAAAGCAGGTGGCTT CCAACTCTCCTATGCACTAACGAAAACAAGATTGCTATCACTGCAGCATTAGGGTATGAT AGTTACCTTGTCATGCGACATGGGGCTGGCCCTGGCATAAGCTGTGAAGCTTCCAGTGTG GTCACTGCCATAGACAAGATGTCCACGGAGGATGCCCTTGGGCGTCAAAGGCTGGGGTGT TATTTCTGCAATGACGTCATTGCTCCTGTCGACTCAGTTTCCAATCGGACACTGGATCAA CAATGTACAGTGACACGACCGGGGTTGGCCTCTATTGCATCAGGACGCGCTGCAGACCTC TTCAGAAGAATGTTACACCATCCTGATGGGATACATGCTCCAGGAGAGATTGCTGGTACA GGCAGTGGTCATGAGCACGGCCTTTTACCTCACCAGATGCGTGGATCACTATCGCAGTAC AACATATTAACCCTGTTGGGCTATTCCTCGAGTAATTGCACGGCATGCTCCCATGCGGTA TTGTATCAATATCGGAGGAGAGGGATGGATTTCGTGATGCAAGTAATCAATGAACCAACC TATTTGGAAGACCTGACCGGCCTCACGGAGTTGATGAAATCCGCGTCTTGCTCACAGGTC GAGTGGGTAGATGAAATTGATGAAGACGATTTCGTCGAGGTCTGA

Peptide Sequence

PEP ID	Zm00001d011347_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:8:147387413:147393769:-1 gene:Zm00001d011347 transcript:Zm00001d011347_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy7 description:Autophagy 7%3B Autophagy-related 7
Sequence	MFSCCFCFILYYGPFMFSFILFQPISYETLPGLTSVASGKAVELFARMLHHPDEIRAPGD TAGTETEHQLGLLPHQLRGSLPKCDLFVELNNSSVNCTACSVAVLSEYRRRGLDFVMQAI NYPAYLKDFTGISDSKRPDTCPKIPPNISVNSDKISDVRCLLLGAGTLGCDVARILMDCG VRKITVVDSGHVVVSNLARQSLYTSDDRGAPKATAILRHLVERCPSVDAQGIKMEIPMPG HPVSPGEAAGVLQDCERLKELVLSHDAIFLLTDTRESRWLPTLLCTNENKIAITAALGYD SYLVMRHGAGPGISCEASSVVTAIDKMSTEDALGRQRLGCYFCNDVIAPVDSVSNRTLDQ QCTVTRPGLASIASGRAADLFRRMLHHPDGIHAPGEIAGTGSGHEHGLLPHQMRGSLSQY NILTLLGYSSSNCTACSHAVLYQYRRRGMDFVMQVINEPTYLEDLTGLTELMKSASCSQV EWVDEIDEDDFVEV

Transcript Sequence

Transcript ID	Zm00001d011347_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:147387413:147393769:-1 gene:Zm00001d011347 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy7 description:Autophagy 7%3B Autophagy-related 7
Sequence	ATAGATAAGGATTGTGGAGTTCCAAGAGTATCTGCAATAGCTCCACATCTGAAAGAAAGA TGTCCTGCAGTGGAGGTTGAAAGCATCCAACTGGAAATACCGATGCCTGGGCATCCTGTT TCTTCCAGCAAAATGGCAAGTGTGCTTGATGACTGCAAGCATCTGCAAACCTTAGTGGCT GCCAATGATGCAATCTTCTTGTTAACTGACACATGGGAGAGCAGGTGGCTTCCAACTCTT CTCTGTTCAAGTGAAAACAAGGTAATGCTTGAACACGGTATCTATTGGCTAAGGACCTTT TCAGCTGTTCTTGTACAGCAATGTCTAAGTTCTTAGGCTTTCTCCAATGGGATACTCTAT ATGCTTGTCTACTCTAAATATAGAGAAAATTCCTTTATCTACACCCTCCAACAATATCCT CTAAAGCGTCCTTTAAATATAGAGGACACTCTTTCATCCTCTCTATATAGAGACTCTCTC TCCTCTATCCATTTTTATGCTTTAGACAACGGAGTAAAAATATATAAGACATTTGAGGGT ATGACAAATATGTTTGGACAAAAAATTGGAGCAAAATACGTCTCATACTCTAATATGAGT CTGTCATATAGAGAACGAAATATAGATGACGTTGTTGCCTTGTTGGAGAGGAATGAGATA TAGAGGAGGGAAGCTTTTAGAAGAGTCTGTAAATGACATATAGAGAAGGGATATAAAGGA TACCGCTGAAGATAGCCTTAGCCTATGGCTGGAGGAGGGAATCCAAATAGATAACCACAC ATATGTTAGTTACAAAAAATTACTCTTAATATCTACTTTTTCATTGTGTATAGCACTTCT AGTTACTAATGATATGTTATACTTGCACTGCAGATTGCTATTAGTGCATTATTAGGACAT GACAGTTACCTTGTCATGCGACATGGTGCTGGACCAGGAACAAGTGGGGGTACAGATGAA GTGACTACTCAGAAATTGTCCACAGAAAATGCTCTTGGTCATCAAAGATTGGGCTGTTGT TTCTGCAATGATACCGCTTCCCTTATTAATGTACATTAGATAAAAGTTTGGTTTGGTGGA CATGTTCTCCTGTTGTTTCTGTTTTATACTTTATTATGGGCCCTTCATGTTCAGTTTTAT TCTTTTTCAGCCAATTTCTTATGAAACACTACCTGGACTTACCTCAGTTGCATCTGGCAA AGCAGTGGAGCTCTTTGCTAGGATGTTACATCATCCTGACGAGATACGGGCCCCAGGCGA TACTGCTGGTACAGAAACAGAACATCAACTTGGTCTATTGCCACATCAGCTACGAGGATC ACTCCCCAAGTGTGATTTATTTGTGGAGCTCAACAATTCCTCAGTCAACTGTACTGCATG TTCTGTTGCTGTATTGTCGGAGTATAGAAGAAGAGGATTGGATTTTGTCATGCAGGCTAT CAACTATCCAGCATATCTGAAAGATTTTACAGGCATTTCTGATTCGAAAAGACCAGATAC TTGTCCTAAAATACCGCCCAACATCTCTGTAAATTCAGACAAGATTTCTGATGTCCGATG TCTACTATTGGGTGCTGGAACTCTTGGATGTGATGTCGCTCGCATTCTTATGGACTGTGG TGTACGGAAGATAACAGTAGTTGATAGTGGTCATGTAGTTGTGTCAAATTTAGCGAGACA ATCACTCTATACTTCTGATGACCGTGGTGCTCCAAAAGCAACTGCAATACTTAGGCATCT AGTGGAGAGATGTCCTTCAGTGGATGCACAAGGCATTAAAATGGAAATACCTATGCCTGG GCATCCTGTGTCTCCTGGTGAAGCAGCGGGTGTGCTCCAAGATTGCGAGCGCCTTAAGGA ATTGGTGTTGTCCCACGATGCTATCTTCTTGTTGACCGACACAAGAGAAAGCAGGTGGCT TCCAACTCTCCTATGCACTAACGAAAACAAGATTGCTATCACTGCAGCATTAGGGTATGA TAGTTACCTTGTCATGCGACATGGGGCTGGCCCTGGCATAAGCTGTGAAGCTTCCAGTGT GGTCACTGCCATAGACAAGATGTCCACGGAGGATGCCCTTGGGCGTCAAAGGCTGGGGTG TTATTTCTGCAATGACGTCATTGCTCCTGTCGACTCAGTTTCCAATCGGACACTGGATCA ACAATGTACAGTGACACGACCGGGGTTGGCCTCTATTGCATCAGGACGCGCTGCAGACCT CTTCAGAAGAATGTTACACCATCCTGATGGGATACATGCTCCAGGAGAGATTGCTGGTAC AGGCAGTGGTCATGAGCACGGCCTTTTACCTCACCAGATGCGTGGATCACTATCGCAGTA CAACATATTAACCCTGTTGGGCTATTCCTCGAGTAATTGCACGGCATGCTCCCATGCGGT ATTGTATCAATATCGGAGGAGAGGGATGGATTTCGTGATGCAAGTAATCAATGAACCAAC CTATTTGGAAGACCTGACCGGCCTCACGGAGTTGATGAAATCCGCGTCTTGCTCACAGGT CGAGTGGGTAGATGAAATTGATGAAGACGATTTCGTCGAGGTCTGATATGTTACATGGTT TTGACGACTGGTAGATAGTATCATTCTTTACAACATGGTAAAGAGATGACGAAGCAATCA AAGCAACCACCCTATATATTTGTAACTCGCTGCTAGCTTTTTACTCTGTCCGTCTTAAAA TGTAATTCGTTTTAGGCTAAACCTACATTCATTAATCTGCTCCGTCTCAAAATGTAATTC ATTTTAGGCTAAACCTACATTCATTAATCAGGTACTCGTGAATGTAGCTTGAATGTATGT CTACATTTATAATCAT