Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011311_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:146409219:146411054:1 gene:Zm00001d011311 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCCTCTTCCACTCCCCCTTCCCGCCACCATGATCACTCCCCACCATTCCAAACCG CACGACGCGCCGAGGCCCGAGGCCTCTTTGCACGCCACGCTCGCCTCCTTCTCGCAGCAA GCCAACGAGGGCAGCCTCCGCGACGCGTTCGCACTGGTCGCCCGCGCCGAGCGGCAGTCC TCCCCCGCCGCGGGCGTTGCGGTGGGTCCGGAGGTGTACACGTCGCTCCTCCAGTGCTGC GTGACGGCCGGGTCCCTCCGCGCGGGCCGCCAGGTGCACGCGGCGCTCGTCAAGCGCGGG ACGTACTACTGCCGGAACGCGTACGTCGGTACCAAGCTCGCCGTCTGCTACGCGCGCTGC GGCGCGCTCGACGACGCGGAACGCGCGTTCGGCGCGCTCCCGGAGAGGGACAGGAACGCC TTCGCGTGGGCCGCCGTCATCGGGCTCTGGAGCCGCGCGGGGCTGCACGGCAGGGCGCTG GCGGGGTTCGTCGCCATGCTCGAGGCCGGCGTCCCCGCGGACAACTTCGTCGTCCCCACC GTGATCAAGGCGTGCGCGGGGCTCGGCCTGGCTGGCACCGGGAGGGCGGTGCACGGGCAC GCGTGCAAGGCGGGCGTGGCTGAGTGCGTCTACGTCATGAGCAGCCTCGTGGACTTGTAC GGCAAGTGCGGGGAGGTGGAGGACGCGAGGGCGGTCTTCGACGCAATGCCTGAGCGGACC GTGGTCAGCTGGAACACGATGCTCATGGCGTACATACACAACGGAAGGATCGACGAAGCC GTGGATCTGTTTTACGAGATGAGGGTCGAGGGCGTGCTGCCGACGAGGGTGAGCATCGTG AGCTTTCTTTCCGCATCAGCGGGTCTCGAGGCTATCGACGGGGGAAGGCAGGGCCACGCA GTGGCAGTTTCGAGCGGGCTGGAGATGGACGTGATTTTGGGGAGCTCCATGATACACTTC TACTGTAAGGTTGGCTTGGTGGAGGCTGCCGAGGCAGTGTTTGAGCAGATGGAAGGGAGA GATGCTGTGGCTTGGAACTTGATGATTGCTGGGTATTTTCAGGACGGGCAGATCGATAAG GCGTTACACACTTGCCGAAGAATGCTGGAGGCTGACCTCAAGTTCGACTGCGTGACGCTG GCGTCCATTATCATGGCTTGTGTAAAGTCCTGCATCACGTTGCTGGGTATAGCTGCTCAT GGTTATGCAGTCAGAAACGGTCTTGATTCAGATAAGACGGTTGCTGCTGGCCTGATAGAC TTGTACGCGAGTACTGGGAGGATCGAACAAGCGCGTCGAGTGTTCAATGCCACGAGTCCG CGAAATCCGGTCGTCTGGAAAGCATTGGTTTCTGCTTACGTCGACTGTGGCATGAACTCT GAGGCTCGGAATCTTGTGAATCAGACGCAGCTTCAAGGCATGTCCTCAAATGCAACGTGT TGGGATTCTGTAATCTCTGCTTTTATACAGAAGGGCCAACTCGAAGACGCTGTAGATATG TTCAGCGAGATGCTTCTGACGAAAACACGGCCCAACCTGCGGACCTGGAGCTTGTTGATA AGTGCCTTGTCGCAAAATGGCATGCGCCAGGAGGTAACAAGCATATGCTGCAAGATGCAG GAAGTGGAGTCAGCGCCCAGTCCCACAATCTATTCATCAGCGATCCTTGCTGTTAAAACG GCAGCTTCTGTAGATTACGGGAAGGCAATCCATGCGTGCGTTGTTAAAAAGGGCCTGCTG CTGTCCAGATCCGTGATCCAGTCGCTTCTGAACATGTACAGTAGTTTTGACGACAGAGAC ACAATGGATGGTTTGCTGAGACTGTTTCCTGAATAA

Peptide Sequence

PEP ID	Zm00001d011311_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:146409219:146411054:1 gene:Zm00001d011311 transcript:Zm00001d011311_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MAPLPLPLPATMITPHHSKPHDAPRPEASLHATLASFSQQANEGSLRDAFALVARAERQS SPAAGVAVGPEVYTSLLQCCVTAGSLRAGRQVHAALVKRGTYYCRNAYVGTKLAVCYARC GALDDAERAFGALPERDRNAFAWAAVIGLWSRAGLHGRALAGFVAMLEAGVPADNFVVPT VIKACAGLGLAGTGRAVHGHACKAGVAECVYVMSSLVDLYGKCGEVEDARAVFDAMPERT VVSWNTMLMAYIHNGRIDEAVDLFYEMRVEGVLPTRVSIVSFLSASAGLEAIDGGRQGHA VAVSSGLEMDVILGSSMIHFYCKVGLVEAAEAVFEQMEGRDAVAWNLMIAGYFQDGQIDK ALHTCRRMLEADLKFDCVTLASIIMACVKSCITLLGIAAHGYAVRNGLDSDKTVAAGLID LYASTGRIEQARRVFNATSPRNPVVWKALVSAYVDCGMNSEARNLVNQTQLQGMSSNATC WDSVISAFIQKGQLEDAVDMFSEMLLTKTRPNLRTWSLLISALSQNGMRQEVTSICCKMQ EVESAPSPTIYSSAILAVKTAASVDYGKAIHACVVKKGLLLSRSVIQSLLNMYSSFDDRD TMDGLLRLFPE

Transcript Sequence

Transcript ID	Zm00001d011311_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:146409219:146411054:1 gene:Zm00001d011311 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCCTCTTCCACTCCCCCTTCCCGCCACCATGATCACTCCCCACCATTCCAAACCG CACGACGCGCCGAGGCCCGAGGCCTCTTTGCACGCCACGCTCGCCTCCTTCTCGCAGCAA GCCAACGAGGGCAGCCTCCGCGACGCGTTCGCACTGGTCGCCCGCGCCGAGCGGCAGTCC TCCCCCGCCGCGGGCGTTGCGGTGGGTCCGGAGGTGTACACGTCGCTCCTCCAGTGCTGC GTGACGGCCGGGTCCCTCCGCGCGGGCCGCCAGGTGCACGCGGCGCTCGTCAAGCGCGGG ACGTACTACTGCCGGAACGCGTACGTCGGTACCAAGCTCGCCGTCTGCTACGCGCGCTGC GGCGCGCTCGACGACGCGGAACGCGCGTTCGGCGCGCTCCCGGAGAGGGACAGGAACGCC TTCGCGTGGGCCGCCGTCATCGGGCTCTGGAGCCGCGCGGGGCTGCACGGCAGGGCGCTG GCGGGGTTCGTCGCCATGCTCGAGGCCGGCGTCCCCGCGGACAACTTCGTCGTCCCCACC GTGATCAAGGCGTGCGCGGGGCTCGGCCTGGCTGGCACCGGGAGGGCGGTGCACGGGCAC GCGTGCAAGGCGGGCGTGGCTGAGTGCGTCTACGTCATGAGCAGCCTCGTGGACTTGTAC GGCAAGTGCGGGGAGGTGGAGGACGCGAGGGCGGTCTTCGACGCAATGCCTGAGCGGACC GTGGTCAGCTGGAACACGATGCTCATGGCGTACATACACAACGGAAGGATCGACGAAGCC GTGGATCTGTTTTACGAGATGAGGGTCGAGGGCGTGCTGCCGACGAGGGTGAGCATCGTG AGCTTTCTTTCCGCATCAGCGGGTCTCGAGGCTATCGACGGGGGAAGGCAGGGCCACGCA GTGGCAGTTTCGAGCGGGCTGGAGATGGACGTGATTTTGGGGAGCTCCATGATACACTTC TACTGTAAGGTTGGCTTGGTGGAGGCTGCCGAGGCAGTGTTTGAGCAGATGGAAGGGAGA GATGCTGTGGCTTGGAACTTGATGATTGCTGGGTATTTTCAGGACGGGCAGATCGATAAG GCGTTACACACTTGCCGAAGAATGCTGGAGGCTGACCTCAAGTTCGACTGCGTGACGCTG GCGTCCATTATCATGGCTTGTGTAAAGTCCTGCATCACGTTGCTGGGTATAGCTGCTCAT GGTTATGCAGTCAGAAACGGTCTTGATTCAGATAAGACGGTTGCTGCTGGCCTGATAGAC TTGTACGCGAGTACTGGGAGGATCGAACAAGCGCGTCGAGTGTTCAATGCCACGAGTCCG CGAAATCCGGTCGTCTGGAAAGCATTGGTTTCTGCTTACGTCGACTGTGGCATGAACTCT GAGGCTCGGAATCTTGTGAATCAGACGCAGCTTCAAGGCATGTCCTCAAATGCAACGTGT TGGGATTCTGTAATCTCTGCTTTTATACAGAAGGGCCAACTCGAAGACGCTGTAGATATG TTCAGCGAGATGCTTCTGACGAAAACACGGCCCAACCTGCGGACCTGGAGCTTGTTGATA AGTGCCTTGTCGCAAAATGGCATGCGCCAGGAGGTAACAAGCATATGCTGCAAGATGCAG GAAGTGGAGTCAGCGCCCAGTCCCACAATCTATTCATCAGCGATCCTTGCTGTTAAAACG GCAGCTTCTGTAGATTACGGGAAGGCAATCCATGCGTGCGTTGTTAAAAAGGGCCTGCTG CTGTCCAGATCCGTGATCCAGTCGCTTCTGAACATGTACAGTAGTTTTGACGACAGAGAC ACAATGGATGGTTTGCTGAGACTGTTTCCTGAATAA