Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011301_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:146174056:146176755:1 gene:Zm00001d011301 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch branching enzyme III
Sequence	ATGGCCTCGTGCCCTCTGTTCCTCCTTGTCCCGCGGCCCCCTCCTTCCCTTGTCGGCGCC GACCGCTGCCCAGGCTCCGCGGGCTGCTCAGATCTCCCAACTAGCTGCCGTCCTCATCCT GGACGCCGGCATGGTTACCCATTTCGTTGCAACTCGTCTTCTTCCTCGTCCGCGCCTCGC GAGCGCCCGCCCAGGCAGCGCCCCGGTGGCCGTGGCGACGCCATCGACCCCGTAGGCTTC CTCACCAAGCTCGGCGTCTCGGACCGCGCCTTCGCCCAGTTCCTCCGCGACCGGCACAAG GCCTTGAAGGACCGTAGATGGGAGCTGTGTTCTCGGTTTATTGATCTGAAAGAGGCATCT TCTGGGTTTGAGTTATTGGGCATGCACCGACATCGACAACACCGCATCGATTTCATGGAA TGGGCTCCAGGTGCTCGGTATTGTTCTTTGATTGGTGATTTTAATCAGTGGTCGCCAACT GAAAACTGTGCCAGGGAAGGTCATTTAGGACATGATGATTTTGGATATTGGTTTATCATA CTTGAAGATAAGCTCAGAGAAGGGCAAGAACAAGATGAATATTTCTTCCAGGAATACAAT TATGTGGATGACTATGATAAAGGTGACAATGGCATTGATGCTGATGAAATAATGCGTAGG ATGAAAGAAGAGTATTGGGAACCTGGAGAAATCAGGTCCCGTCAGTCTCAGTTAGAGATG GTTGTTAAGCTATATGAGCAAATGTTTGGCCCAAACGGTCCACAAACAGAGGAGGAGCTA GGTGAAATTCCTGATGCCCAAACAAGATACAATGAGTTCAAAGCATCGCAGAAGGCTGAC TCTTCCAGCCAGCCTTCCTATGATATCATTGACAATGGGCAGGAGTTCGACATTTTCAGT GTTGTAACTGATCGTGCATCATTTGAAAAGTTTCAAGCAAAAAAACCTCCCCTTGCTTAC TGGGTTGAAATGAGGAAAGGTCGAATAGCATGGCTTGAGAAATATGTTCCAACAATTTCT CATAAAGACAAGTACAGGGTTTATTTTAATACTCCTGATGGTGCTTTAGAACGTATTCCT GCTTGGGCTGCATATGTTCTTCCAGATGCTGAGGGGAAGCAATCCTATGCAGTACATTGG GAACCACCTCCTGAAGAAATTTACAAATGGAGATTTGGACGTCCAAAGGTGAAGGGTTCA CTTAGAATATATGAATGTCATGTTGGAATAAGTGGTTCAGAGCAAAAGGTTTCATCATTT CAGGAGTTCACATCCAAAGTCCTACCGCATATAAAAAAAGCTGGATATAATGCTGTTCAG CTGATTGGTGTTGTGGAGCACAAGGATTACTCCTCCATTGGCTATAAGGTCACTAATTAT TTTGCAGTCAGCAGCAGATTTGGCACCCCAGATGACTTCAAGAAATTAGTCGATGAAGCG CATGGCCTTGGATTAGTAGTGCTTCTGGATATTATCCACTCCTATGCATCCGCAGATGAA CTGGTTGGCTTATCACTTTTTGATGGCTCTAATGACTGTTACTTCCACAGTGGAAAAAGA GGGCATCACAAGTACTGGGGCACCAGGATGTTTAAATATGATGATGTGGATGTTCTGCAC TTCTTGTTGTCCAATTTGAATTGGTGGGTCACTGAGTACCGGATTGATGGATTCCAGTTC CATTCCTTGTCTTCTATGTTATATACTCATAATGGGTTTTCTACTTTTACTGGTGCCATG GAAGAGTATTGCAATCAGTATGTTGACAAGGATGCACTGATATATCTAATTCTAGCAAAT GAAATGTTACATCGTCTTCATCCAGATATTGTAACAATTGCTGAAGATGCAACATTTTAT CCTGGATTATGTGAGCCAATTACTCAAGGCGGATTGGGATTCAACTACTGGGTCAATCTT TCTATACCAGAAATGTGGTTGTGGCATCTTGAAAATGTCCCTGAACAAGAATGGAGCATG AATAAGATTATTAAAGTATTAGTAAGCAGTAACCAGAATATGCTATCATATGTTGAAAAT CATAACCAGTCCATATCTGGACGCAAGTCTTTTGCTGAGATAATTCTTAATTCAAGAGAG TGCTCTGTTGGTTCTGTTGACGACAATTTGATTAGAGCTTCTTCTTTGTTGAAATTGATG AAACTAATTACTTTCACGACAAGCGGAGGCGCTTATCTCAACTTCATGGGCAATGAATTT GCACATCCAGAAAAAGTTGAATTTCCTATGCCAAGCAATGACTATTCCTTCGAGTTAGCT AATCGGCAATGGGAACTATTGGACAAAGTTTTTCATAAACATATATTTAACTTTGACAAG GATGTTATGAGCTTGGATGAAAATGAAAGGATAATTTCTAGAGGTCCACCCAACATTCTT CACTGTGATGACACAAGCATGGTCATATCTTTCACAAGAGGGCCTTTATTTTTCATATTT AATTTTAATCCTCAAGTCTCCCATCAGTCGTATCGTGTTGGTGTGGATGAAGCTGGGGAA TACCAACTCATCTTCAACACAGATGAAACTAAATATGGTGGATGTGAAACCCTCAAGAGT AGTCAGTATATGCGGAGGACCTCTGATAAAAGAGCTGATGGTTGTCGCAACTCCTTGGAA TTGGCATTGCCATCTAGAAGTGCTCAGATTTACAAGTTAGTTAGAATTTTGAGAATTTAG

Peptide Sequence

PEP ID	Zm00001d011301_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:146174056:146176755:1 gene:Zm00001d011301 transcript:Zm00001d011301_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch branching enzyme III
Sequence	MASCPLFLLVPRPPPSLVGADRCPGSAGCSDLPTSCRPHPGRRHGYPFRCNSSSSSSAPR ERPPRQRPGGRGDAIDPVGFLTKLGVSDRAFAQFLRDRHKALKDRRWELCSRFIDLKEAS SGFELLGMHRHRQHRIDFMEWAPGARYCSLIGDFNQWSPTENCAREGHLGHDDFGYWFII LEDKLREGQEQDEYFFQEYNYVDDYDKGDNGIDADEIMRRMKEEYWEPGEIRSRQSQLEM VVKLYEQMFGPNGPQTEEELGEIPDAQTRYNEFKASQKADSSSQPSYDIIDNGQEFDIFS VVTDRASFEKFQAKKPPLAYWVEMRKGRIAWLEKYVPTISHKDKYRVYFNTPDGALERIP AWAAYVLPDAEGKQSYAVHWEPPPEEIYKWRFGRPKVKGSLRIYECHVGISGSEQKVSSF QEFTSKVLPHIKKAGYNAVQLIGVVEHKDYSSIGYKVTNYFAVSSRFGTPDDFKKLVDEA HGLGLVVLLDIIHSYASADELVGLSLFDGSNDCYFHSGKRGHHKYWGTRMFKYDDVDVLH FLLSNLNWWVTEYRIDGFQFHSLSSMLYTHNGFSTFTGAMEEYCNQYVDKDALIYLILAN EMLHRLHPDIVTIAEDATFYPGLCEPITQGGLGFNYWVNLSIPEMWLWHLENVPEQEWSM NKIIKVLVSSNQNMLSYVENHNQSISGRKSFAEIILNSRECSVGSVDDNLIRASSLLKLM KLITFTTSGGAYLNFMGNEFAHPEKVEFPMPSNDYSFELANRQWELLDKVFHKHIFNFDK DVMSLDENERIISRGPPNILHCDDTSMVISFTRGPLFFIFNFNPQVSHQSYRVGVDEAGE YQLIFNTDETKYGGCETLKSSQYMRRTSDKRADGCRNSLELALPSRSAQIYKLVRILRI

Transcript Sequence

Transcript ID	Zm00001d011301_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:146174056:146176755:1 gene:Zm00001d011301 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch branching enzyme III
Sequence	ATGGCCTCGTGCCCTCTGTTCCTCCTTGTCCCGCGGCCCCCTCCTTCCCTTGTCGGCGCC GACCGCTGCCCAGGCTCCGCGGGCTGCTCAGATCTCCCAACTAGCTGCCGTCCTCATCCT GGACGCCGGCATGGTTACCCATTTCGTTGCAACTCGTCTTCTTCCTCGTCCGCGCCTCGC GAGCGCCCGCCCAGGCAGCGCCCCGGTGGCCGTGGCGACGCCATCGACCCCGTAGGCTTC CTCACCAAGCTCGGCGTCTCGGACCGCGCCTTCGCCCAGTTCCTCCGCGACCGGCACAAG GCCTTGAAGGACCGTAGATGGGAGCTGTGTTCTCGGTTTATTGATCTGAAAGAGGCATCT TCTGGGTTTGAGTTATTGGGCATGCACCGACATCGACAACACCGCATCGATTTCATGGAA TGGGCTCCAGGTGCTCGGTATTGTTCTTTGATTGGTGATTTTAATCAGTGGTCGCCAACT GAAAACTGTGCCAGGGAAGGTCATTTAGGACATGATGATTTTGGATATTGGTTTATCATA CTTGAAGATAAGCTCAGAGAAGGGCAAGAACAAGATGAATATTTCTTCCAGGAATACAAT TATGTGGATGACTATGATAAAGGTGACAATGGCATTGATGCTGATGAAATAATGCGTAGG ATGAAAGAAGAGTATTGGGAACCTGGAGAAATCAGGTCCCGTCAGTCTCAGTTAGAGATG GTTGTTAAGCTATATGAGCAAATGTTTGGCCCAAACGGTCCACAAACAGAGGAGGAGCTA GGTGAAATTCCTGATGCCCAAACAAGATACAATGAGTTCAAAGCATCGCAGAAGGCTGAC TCTTCCAGCCAGCCTTCCTATGATATCATTGACAATGGGCAGGAGTTCGACATTTTCAGT GTTGTAACTGATCGTGCATCATTTGAAAAGTTTCAAGCAAAAAAACCTCCCCTTGCTTAC TGGGTTGAAATGAGGAAAGGTCGAATAGCATGGCTTGAGAAATATGTTCCAACAATTTCT CATAAAGACAAGTACAGGGTTTATTTTAATACTCCTGATGGTGCTTTAGAACGTATTCCT GCTTGGGCTGCATATGTTCTTCCAGATGCTGAGGGGAAGCAATCCTATGCAGTACATTGG GAACCACCTCCTGAAGAAATTTACAAATGGAGATTTGGACGTCCAAAGGTGAAGGGTTCA CTTAGAATATATGAATGTCATGTTGGAATAAGTGGTTCAGAGCAAAAGGTTTCATCATTT CAGGAGTTCACATCCAAAGTCCTACCGCATATAAAAAAAGCTGGATATAATGCTGTTCAG CTGATTGGTGTTGTGGAGCACAAGGATTACTCCTCCATTGGCTATAAGGTCACTAATTAT TTTGCAGTCAGCAGCAGATTTGGCACCCCAGATGACTTCAAGAAATTAGTCGATGAAGCG CATGGCCTTGGATTAGTAGTGCTTCTGGATATTATCCACTCCTATGCATCCGCAGATGAA CTGGTTGGCTTATCACTTTTTGATGGCTCTAATGACTGTTACTTCCACAGTGGAAAAAGA GGGCATCACAAGTACTGGGGCACCAGGATGTTTAAATATGATGATGTGGATGTTCTGCAC TTCTTGTTGTCCAATTTGAATTGGTGGGTCACTGAGTACCGGATTGATGGATTCCAGTTC CATTCCTTGTCTTCTATGTTATATACTCATAATGGGTTTTCTACTTTTACTGGTGCCATG GAAGAGTATTGCAATCAGTATGTTGACAAGGATGCACTGATATATCTAATTCTAGCAAAT GAAATGTTACATCGTCTTCATCCAGATATTGTAACAATTGCTGAAGATGCAACATTTTAT CCTGGATTATGTGAGCCAATTACTCAAGGCGGATTGGGATTCAACTACTGGGTCAATCTT TCTATACCAGAAATGTGGTTGTGGCATCTTGAAAATGTCCCTGAACAAGAATGGAGCATG AATAAGATTATTAAAGTATTAGTAAGCAGTAACCAGAATATGCTATCATATGTTGAAAAT CATAACCAGTCCATATCTGGACGCAAGTCTTTTGCTGAGATAATTCTTAATTCAAGAGAG TGCTCTGTTGGTTCTGTTGACGACAATTTGATTAGAGCTTCTTCTTTGTTGAAATTGATG AAACTAATTACTTTCACGACAAGCGGAGGCGCTTATCTCAACTTCATGGGCAATGAATTT GCACATCCAGAAAAAGTTGAATTTCCTATGCCAAGCAATGACTATTCCTTCGAGTTAGCT AATCGGCAATGGGAACTATTGGACAAAGTTTTTCATAAACATATATTTAACTTTGACAAG GATGTTATGAGCTTGGATGAAAATGAAAGGATAATTTCTAGAGGTCCACCCAACATTCTT CACTGTGATGACACAAGCATGGTCATATCTTTCACAAGAGGGCCTTTATTTTTCATATTT AATTTTAATCCTCAAGTCTCCCATCAGTCGTATCGTGTTGGTGTGGATGAAGCTGGGGAA TACCAACTCATCTTCAACACAGATGAAACTAAATATGGTGGATGTGAAACCCTCAAGAGT AGTCAGTATATGCGGAGGACCTCTGATAAAAGAGCTGATGGTTGTCGCAACTCCTTGGAA TTGGCATTGCCATCTAGAAGTGCTCAGATTTACAAGTTAGTTAGAATTTTGAGAATTTAG