Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011277_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:145550689:145553038:1 gene:Zm00001d011277 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein5 description: SUN domain protein5
Sequence	ATGAGCAGGAAGAGGAGAGAAGGAGGCGGCGGCGGAAGAGGCGCTGGGCCGGTGGACCAT CACGGCGGCGGCAAGGGGTCGGAGGCCGGCGCTGCCGCCACCGATGCCGTGTCCATGGAC GGCGGCCTCCGCGAGGTGTCTGTCCCCGTCGTCTTCTCGGTTTGGTGCCTCCTCTTCCTC CTGCGATCCCAGTTCCTCCACAGCCAGGCCGACGACGACCCTTCGTCAGAGTTCTACGAG GAGCACGGCATGCGCGACAGCTACTGCAAGGTGAGGCCGTTGGAGGCCTACGTGCTCCCC TACCATAACGACTCGTGTCAGTCCTCCTACTCGCACTCACAGCCGCCCCAAGAAGCGCCC TCGTCGTCCGCGCTCGCGTCGCCGCAGTACAATGCCACCACCGGCGGCAACGCGTCGTCG CCCGAGGCGGCGTTCGTGGGCCTCGACGAGTTCCGCAGCCGCATGATGCAGGGCAAGGCG GAGAACGACACCGGCCCGCCCACGGATGGCGGCGTCGCGCACCGCCTCGAGCCCAACGGC GCCGAGTACAACTACGCCGCGGCGGCCAAGGGCGCCAAGGTGCTCGCGCACAACAAGGAG GCCAAGGGCGCCGCCAACATCCTCGGCGGCGACAAGGACAAGTACCTGCGCAACCCGTGC TCCGCCGCCGACAAGTTCGTCGTGGTCGAGCTCTCGGAGGAGACGCTCGTCGACACCGTC GCGCTGGCGAACCTGGAGCACTACTCGTCCAACTTCAGGGAGTTCGAGGTGTACGGCAGC ACGAGCTACCCGACGGAGGCGTGGGAGCTGCTGGGGCGTTTCACCGCCGAGAACGCCAAG CACGCGCAGCGCTTCGTGCTGCCGGAGCCCAGGTGGACGCGGTACCTCCGCCTGCGCCTC GTCAGCCACTACGGATCCGGCTTCTACTGCATCCTCAGTTACCTCGAGGTCTACGGCGTC GACGCCGTCGAGCGGATGCTACAGGACTTCATCGCTGGCGCTGGCGCCGGCGCCGGCGCC GAGGCCGACGCCTCCAGGGACCGCGCGCCCATCGACTTCGCCAACCGGGACGCCGACTGC AACGACACCACCGCTCAGCAGGATGGGAACGGCGGCGCTGGGAGGAATGACAGCACCGCC GGCGACGGCAAGAGCAACAGCTCCAGGAGCGGCGACGCGAAGCTGCCGCCGCAGGTAGCG GCGTTGGCATCGCCCACGGGGCGGATCCACAGCGACGGCGTGCTAAAGATCCTGATGCAG AAGATGCGGTCGCTGGAGCTGAGCCTGTCGACGCTGGAGGAGTACACGAGGGAGCTCAAC CAGCGGTACGGCGCCAAGCTGCCGGACCTGCAGAACGGGCTCTCGCAGACGGCCGTGGCG CTGGAGAAGATGAAGGCCGACGTGCACGACCTCGTCGACGGGAAGGACAGCGTGGCCAAG GACCTGGACGACCTCAAGGCCTGGAAGTCGACCGTCTCCGGCAAGCTGGACGATCTGATC AAGGAGAACCAGGAGATGAGGCAAGTGCCATTTCCCCGCGGCGCGGCGCGGCGCGGCGGC TCATCCGATCGCCAGTGGAGCGTCGAGGAGATGCGGGGCGTGCAGGAGACGCTGCAGAAC AAGGAGCTGGCGGTGCTGTCCATCAGCCTCTTCTTCGCGTGCCTGGCGCTCTTCAAACTG GCGTGCGACCGCGTGTTCTGCCTCTTCGCCGGCAAGGGCAGGGAGGAACCCGACGCGGAG GAGCACACAAGGAGCAGTAGGGCGTGGATGCTCGTGCTCGCCAGCAGCAGCTTCACCACC CTCATCGTCCTGCTCTACAACTGA

Peptide Sequence

PEP ID	Zm00001d011277_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:145550689:145553038:1 gene:Zm00001d011277 transcript:Zm00001d011277_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein5 description: SUN domain protein5
Sequence	MSRKRREGGGGGRGAGPVDHHGGGKGSEAGAAATDAVSMDGGLREVSVPVVFSVWCLLFL LRSQFLHSQADDDPSSEFYEEHGMRDSYCKVRPLEAYVLPYHNDSCQSSYSHSQPPQEAP SSSALASPQYNATTGGNASSPEAAFVGLDEFRSRMMQGKAENDTGPPTDGGVAHRLEPNG AEYNYAAAAKGAKVLAHNKEAKGAANILGGDKDKYLRNPCSAADKFVVVELSEETLVDTV ALANLEHYSSNFREFEVYGSTSYPTEAWELLGRFTAENAKHAQRFVLPEPRWTRYLRLRL VSHYGSGFYCILSYLEVYGVDAVERMLQDFIAGAGAGAGAEADASRDRAPIDFANRDADC NDTTAQQDGNGGAGRNDSTAGDGKSNSSRSGDAKLPPQVAALASPTGRIHSDGVLKILMQ KMRSLELSLSTLEEYTRELNQRYGAKLPDLQNGLSQTAVALEKMKADVHDLVDGKDSVAK DLDDLKAWKSTVSGKLDDLIKENQEMRQVPFPRGAARRGGSSDRQWSVEEMRGVQETLQN KELAVLSISLFFACLALFKLACDRVFCLFAGKGREEPDAEEHTRSSRAWMLVLASSSFTT LIVLLYN

Transcript Sequence

Transcript ID	Zm00001d011277_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:145550689:145553038:1 gene:Zm00001d011277 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein5 description: SUN domain protein5
Sequence	GCGCGCTCGGCTCGGCGCACATGCGCATCTCGACATGTCCTCCGCCGAACTTGGCGCTCT GTCACTTGCTTCCTCCTCCCTCGTCTCGACCCGGCTCGCCCCTGTTATCCGTCTCGTCTC CCACCGCTGCGCGCGCGAGATAGACTCTGTCGCATCTCGATCACCAACCGGGCCATTCCA TTCGTGTGGGTTTGCTCATTTTGGCTGGGATTTCACGCGGGACCGATCACCGCACGCCGG TGTGCGCGTGCGTCTGGCGCACGGCCGGCGTCCTCCTCCCAACGCGCCGGAAATAGGCAG GCGGTGCATGCATGAGCAGGAAGAGGAGAGAAGGAGGCGGCGGCGGAAGAGGCGCTGGGC CGGTGGACCATCACGGCGGCGGCAAGGGGTCGGAGGCCGGCGCTGCCGCCACCGATGCCG TGTCCATGGACGGCGGCCTCCGCGAGGTGTCTGTCCCCGTCGTCTTCTCGGTTTGGTGCC TCCTCTTCCTCCTGCGATCCCAGTTCCTCCACAGCCAGGCCGACGACGACCCTTCGTCAG AGTTCTACGAGGAGCACGGCATGCGCGACAGCTACTGCAAGGTGAGGCCGTTGGAGGCCT ACGTGCTCCCCTACCATAACGACTCGTGTCAGTCCTCCTACTCGCACTCACAGCCGCCCC AAGAAGCGCCCTCGTCGTCCGCGCTCGCGTCGCCGCAGTACAATGCCACCACCGGCGGCA ACGCGTCGTCGCCCGAGGCGGCGTTCGTGGGCCTCGACGAGTTCCGCAGCCGCATGATGC AGGGCAAGGCGGAGAACGACACCGGCCCGCCCACGGATGGCGGCGTCGCGCACCGCCTCG AGCCCAACGGCGCCGAGTACAACTACGCCGCGGCGGCCAAGGGCGCCAAGGTGCTCGCGC ACAACAAGGAGGCCAAGGGCGCCGCCAACATCCTCGGCGGCGACAAGGACAAGTACCTGC GCAACCCGTGCTCCGCCGCCGACAAGTTCGTCGTGGTCGAGCTCTCGGAGGAGACGCTCG TCGACACCGTCGCGCTGGCGAACCTGGAGCACTACTCGTCCAACTTCAGGGAGTTCGAGG TGTACGGCAGCACGAGCTACCCGACGGAGGCGTGGGAGCTGCTGGGGCGTTTCACCGCCG AGAACGCCAAGCACGCGCAGCGCTTCGTGCTGCCGGAGCCCAGGTGGACGCGGTACCTCC GCCTGCGCCTCGTCAGCCACTACGGATCCGGCTTCTACTGCATCCTCAGTTACCTCGAGG TCTACGGCGTCGACGCCGTCGAGCGGATGCTACAGGACTTCATCGCTGGCGCTGGCGCCG GCGCCGGCGCCGAGGCCGACGCCTCCAGGGACCGCGCGCCCATCGACTTCGCCAACCGGG ACGCCGACTGCAACGACACCACCGCTCAGCAGGATGGGAACGGCGGCGCTGGGAGGAATG ACAGCACCGCCGGCGACGGCAAGAGCAACAGCTCCAGGAGCGGCGACGCGAAGCTGCCGC CGCAGGTAGCGGCGTTGGCATCGCCCACGGGGCGGATCCACAGCGACGGCGTGCTAAAGA TCCTGATGCAGAAGATGCGGTCGCTGGAGCTGAGCCTGTCGACGCTGGAGGAGTACACGA GGGAGCTCAACCAGCGGTACGGCGCCAAGCTGCCGGACCTGCAGAACGGGCTCTCGCAGA CGGCCGTGGCGCTGGAGAAGATGAAGGCCGACGTGCACGACCTCGTCGACGGGAAGGACA GCGTGGCCAAGGACCTGGACGACCTCAAGGCCTGGAAGTCGACCGTCTCCGGCAAGCTGG ACGATCTGATCAAGGAGAACCAGGAGATGAGGCAAGTGCCATTTCCCCGCGGCGCGGCGC GGCGCGGCGGCTCATCCGATCGCCAGTGGAGCGTCGAGGAGATGCGGGGCGTGCAGGAGA CGCTGCAGAACAAGGAGCTGGCGGTGCTGTCCATCAGCCTCTTCTTCGCGTGCCTGGCGC TCTTCAAACTGGCGTGCGACCGCGTGTTCTGCCTCTTCGCCGGCAAGGGCAGGGAGGAAC CCGACGCGGAGGAGCACACAAGGAGCAGTAGGGCGTGGATGCTCGTGCTCGCCAGCAGCA GCTTCACCACCCTCATCGTCCTGCTCTACAACTGA