Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011233_T050
CDS Infomation	cds chromosome:B73_RefGen_v4:8:144120896:144127742:1 gene:Zm00001d011233 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated family protein
Sequence	ATGGCCAGTCCAGAGACAGTTGATGGTATGCTTGAGAGTCTAGGCAACTTGCTGAATTTA TTGGACACATCGGCTGCTGAAAGTGTGTTGCCAACAACTTATGGATGTTTGCGCCCACCT CTTGGAAAACATCGTCTGAAGATTGTTGAATTCATCTCTGTGCTGCTTACAATTGGAAGT GAAACTGCAGAAAAGGAGCTAGTAAGACAGTCAGCAATAAAGCGATCGATTGATTTGTTC TTTGAGTATCCATATAACAACTTTTTGCACCATCATGTTGAGAATATAATTGTTTCTTGC CTGGAGGGTAAAAGACCTGAAGTTGTTGAGCATGTTCTTCATGAATGTGATATTGTTGGT AAAATTCTTGTTTCAGAAAGGCTTTCATCTTTGTCGACTGAGTCTAATGGGCCTACTGTT CCCACTGAAGGAAAAACACATCCAAGAGTTGGAAATGTTGGCCACATGACAAGAATAGCC AATAAGCTTATTCAGTTGGGCAACAGTAACAACACAATCCAGGCTCACTTACAGGAAAAT AATGAGTGGGTTGAATGGCAAACAAATGTGCTGGTCAAACGTAATGAAGTAGAGAATGTT TATCATTGGGCTTGTGGGCGCCCGGCGTCATTACATGACCGTGGTAGGGACAGTGATGAT GATGACTTCCGGGACAGGGACTACGACGTGGCAGCTCTTGCTAATAACTTAAGTCAGGCA TTTCGTTATGGGATATACAGCAGCGATGACATCGAAGAGGCACAAGGATCACTTGAAAGA GATGATGAGGATGTGTATTTTGATGATGAATCAGCTGAGGTGGTAATATCTTCTTTGCGT CTGGGAGATGACCAGGAAGGCTCCCTCTTTACAAATTCAAACTGGTTCACATTTGATGGA GAGAGAGGCATTGATGACCGATCATCTGCCTCTGTTCCTTCATCATCCCCCAATTCTGAG GAGACATCACTAAAGACTGAGGAAGCTGATGATGGTAAAGTCATTGGCACTGAGGATGAA ATGGAAACAGTGTATCTTGGAAATGGTAGTGTTGAGGAGGTAAAAGATGTAGCAGAATGT ACTGAACAGCCAAATTGTTGTACTGAGGAAGAGCGATTGAAAAATGAAGAAGGGATGGAA TGGCATCCAAATGCTTCAAATAACGATACCGAGGCTGAGGCTGCCGCAGAGTCTTCAGCC CCATCAGTTGAGATAGTGGCAGAGAAAACAGTAGATGAACCATTAGAGGTGGGAAGAAAA TTGGATGAACCGGCAGAATCATCTTTGGACAGTTCTGTCTCTGTAGCTTTGCCAGCTCCT GTTAACGGTAGTGAGCCTGCCAACTCGGAAGTATCTTCTGAACAAGTAGCCCATGCCACT GATGTGCAGCAACCAGTGAAGGAAGCTCCTGCCGAGGATGATGATGCAAAGAAAACTGAT GCAGCCAAAACAAACGAGTGA

Peptide Sequence

PEP ID	Zm00001d011233_P050
PEP Infomation	pep chromosome:B73_RefGen_v4:8:144120896:144127742:1 gene:Zm00001d011233 transcript:Zm00001d011233_T050 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated family protein
Sequence	MASPETVDGMLESLGNLLNLLDTSAAESVLPTTYGCLRPPLGKHRLKIVEFISVLLTIGS ETAEKELVRQSAIKRSIDLFFEYPYNNFLHHHVENIIVSCLEGKRPEVVEHVLHECDIVG KILVSERLSSLSTESNGPTVPTEGKTHPRVGNVGHMTRIANKLIQLGNSNNTIQAHLQEN NEWVEWQTNVLVKRNEVENVYHWACGRPASLHDRGRDSDDDDFRDRDYDVAALANNLSQA FRYGIYSSDDIEEAQGSLERDDEDVYFDDESAEVVISSLRLGDDQEGSLFTNSNWFTFDG ERGIDDRSSASVPSSSPNSEETSLKTEEADDGKVIGTEDEMETVYLGNGSVEEVKDVAEC TEQPNCCTEEERLKNEEGMEWHPNASNNDTEAEAAAESSAPSVEIVAEKTVDEPLEVGRK LDEPAESSLDSSVSVALPAPVNGSEPANSEVSSEQVAHATDVQQPVKEAPAEDDDAKKTD AAKTNE

Transcript Sequence

Transcript ID	Zm00001d011233_T050
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:144120896:144127742:1 gene:Zm00001d011233 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated family protein
Sequence	AGTTTTGTTCGGAGGTTGTTCCATCACGCTCTTGAAGAATCAAGACCCAAATCTGTTCTG CTTCATTCACTGTCAGTGTGCATATCTTTGCTGGATCCAAAAAGACTAGCATCAGCTTCG TATCAAGCATTCAAAAGCAACTTAAGTCATGGGGCATTGGTCATGGCCAGTCCAGAGACA GTTGATGGTATGCTTGAGAGTCTAGGCAACTTGCTGAATTTATTGGACACATCGGCTGCT GAAAGTGTGTTGCCAACAACTTATGGATGTTTGCGCCCACCTCTTGGAAAACATCGTCTG AAGATTGTTGAATTCATCTCTGTGCTGCTTACAATTGGAAGTGAAACTGCAGAAAAGGAG CTAGTAAGACAGTCAGCAATAAAGCGATCGATTGATTTGTTCTTTGAGTATCCATATAAC AACTTTTTGCACCATCATGTTGAGAATATAATTGTTTCTTGCCTGGAGGGTAAAAGACCT GAAGTTGTTGAGCATGTTCTTCATGAATGTGATATTGTTGGTAAAATTCTTGTTTCAGAA AGGCTTTCATCTTTGTCGACTGAGTCTAATGGGCCTACTGTTCCCACTGAAGGAAAAACA CATCCAAGAGTTGGAAATGTTGGCCACATGACAAGAATAGCCAATAAGCTTATTCAGTTG GGCAACAGTAACAACACAATCCAGGCTCACTTACAGGAAAATAATGAGTGGGTTGAATGG CAAACAAATGTGCTGGTCAAACGTAATGAAGTAGAGAATGTTTATCATTGGGCTTGTGGG CGCCCGGCGTCATTACATGACCGTGGTAGGGACAGTGATGATGATGACTTCCGGGACAGG GACTACGACGTGGCAGCTCTTGCTAATAACTTAAGTCAGGCATTTCGTTATGGGATATAC AGCAGCGATGACATCGAAGAGGCACAAGGATCACTTGAAAGAGATGATGAGGATGTGTAT TTTGATGATGAATCAGCTGAGGTGGTAATATCTTCTTTGCGTCTGGGAGATGACCAGGAA GGCTCCCTCTTTACAAATTCAAACTGGTTCACATTTGATGGAGAGAGAGGCATTGATGAC CGATCATCTGCCTCTGTTCCTTCATCATCCCCCAATTCTGAGGAGACATCACTAAAGACT GAGGAAGCTGATGATGGTAAAGTCATTGGCACTGAGGATGAAATGGAAACAGTGTATCTT GGAAATGGTAGTGTTGAGGAGGTAAAAGATGTAGCAGAATGTACTGAACAGCCAAATTGT TGTACTGAGGAAGAGCGATTGAAAAATGAAGAAGGGATGGAATGGCATCCAAATGCTTCA AATAACGATACCGAGGCTGAGGCTGCCGCAGAGTCTTCAGCCCCATCAGTTGAGATAGTG GCAGAGAAAACAGTAGATGAACCATTAGAGGTGGGAAGAAAATTGGATGAACCGGCAGAA TCATCTTTGGACAGTTCTGTCTCTGTAGCTTTGCCAGCTCCTGTTAACGGTAGTGAGCCT GCCAACTCGGAAGTATCTTCTGAACAAGTAGCCCATGCCACTGATGTGCAGCAACCAGTG AAGGAAGCTCCTGCCGAGGATGATGATGCAAAGAAAACTGATGCAGCCAAAACAAACGAG TGAAGTAGCAACATGCTGGGCTGAGCTGATCAGAGCGATTGCTTGTGAACTGAAAACTCT GTAGAGTGCAGCTTGGGCATCCATCTTGCTTCATGTGTGCTCAGCTGCCACAAGATAGTC TGAAGCAAACTGCTGTACAATAAGCAAGTAATTGCTCTACCATCAACCGTGGCATGCCAC TGTACAAATGAGCACCACTGACTAACGCACGTCAGTCGCCTTGTCTGAAACTGGTCATTT TCTTTGAAGTTCACCCTCCAGTCCATGTGCTTTGGTGGCAGTCTTCATGGCATGGTATAT GATACCTGAAAGAACATTCTTTGGGTGGCAACTGGTTTTGGCTACTTAGTCTTCTGTTGC TTTAGGTTAACTTTGGAACTGTAATATGAGATGTGATTTTATTTC