Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011210_T066
CDS Infomation	cds chromosome:B73_RefGen_v4:8:143025412:143027608:1 gene:Zm00001d011210 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lycopene epsilon cyclase1 description: lycopene epsilon cyclase1
Sequence	ATGAAGTGCGCTCCAGACTACTGCAACATCTACGTCGTGGCCAAGGGCAAGTCCGTCAAT GTCAGGCTCGCCAAGTGCGGCGTCCCGCCGATGCACACTGGCGCCGACATCGCTTCGGAC ACCGACTCCCTCCGGGAATCGGTGCTCTACATGCGACGCGGCTCCAGGGGGCACCTGCCG CGGGTGACGCCTGACGCCTGGCGCTCCATTGACGGGCGCACACCGCCGGAGCTATCCACG CGGCCACTGTTCCGCGAGCGCTTGCTCTCGTCATCGGCCACCACCAAGAACTTTGTCGTC CTGCCAGGAAAGGACAACTTCGAGACGTCCTCCCGCTCGGCGAGACACGACTCGTTAGGC GGCGACCTCGACTTCGGCCCGAGCACGCGCTTCTCCTACATAGACTTGGGCGAGAACCTC GATATGTCCACCACTCTCCCCGCTCTGGAACCCATGTCACCGGCCACCGGCGCGCAGCGG GATACCGAGGCCGAGATGCGGCGGCTCCGGTTGGAGCTCAAGCAGACCATGGACATGTAC AACGCGGCGTGCAAGGAGGCCATCAACGCCAAGCAGCGGGCCAAGGAGATGCATATGATG AAGCTGGAGGAAGCGCGTCGGCTGGAGGAGGCCAGGAACGCCGAGGAGGCTGCTCTGGCA GTGGCCGAGATGGAGAAGGCCAAGTGCCGCGCGGCCATGGAGGCCGCCGAGGCGGCGCAG AGGCTGGCTGACCTGGAGGCGCAGCGGCGCCGCAACGCCGAGGTGCGCGCGCGCCGGGAG GCCGACGAGAAGGTGCGCGCTCTGGATGCCATTTCCAACCACGACTTCCGGTACCGCAAG TACCACATCGACGAGATCGAGATGGCCACGGAGCGCTTCTCCGACGAGCTCAAAATCGGC GAGGGCGGCTACGGCCCCGTCTACCGCGCCTCCCTCGACCACACCCCCGTCGCCATCAAG GTGCTCCGGCCCGACGCGCACCAGGGGAGGAAGCAGTTCCTGCAGGAGGTGGAGGTGCTC AGCTGCATCCGCCACCCCAACATGGTGCTCCTCCTCGGCGCATGCCCGGAGTACGGCTGT CTCGTGTACGAGTACATGGACCACGGCAGCCTCGAGGACCGGCTGTTCCGTCGGGGCGGC ACGCCGCCGCTCGCGTGGGCCCAGCGGTTCCGGATCGCGGCGGAGATCGCGACGGCGCTG CTGTTCCTGCACCAAACGAAGCCGGAGCCGCTGGTGCACCGGGACCTGAAGCCGGCCAAC ATCCTGCTGGACCGCAACTACGTGAGCAAGATCAGCGACGTCGGGCTGGCACGCCTGGTG CCGCCGTCGGTGGCGGACAACGTGACGCAGTACCGGCTGACGGCGACGGCGGGCACCTTC TGCTACATCGACCCGGAGTACCAGCAGACGGGCAAGCTGGGCGTCAAGTCGGACATCTAC TCCCTCGGCGTGCTCCTGCTGCAGGTGGTCACCGCGCGGCCACCCATGGGGCTCACGCAT CACGTCGAGAAGGCCATCGACGCGGGCACCTTTGAGCAGATGCTCGACATCACCGTCAAG GACTGGCCCGTCGAGGAGGCGCTCGGCTACGCCAAGCTCGCGCTCAAGTGCACGGAGATG CGGCGGAGGGACCGGCCGGACCTCGCCACAGTCATACTGCCGGAGCTCAACCGGTTAAGG AACCTCGGCCACGCGTACGAGGCACGCATGAGCGCCGCCAGGGCCAACGGTGGAAGTGGA GAGAGTGGTGCCCAGATCAGCGGGGACTCGACAACGGTGGGTGGTTCATGGGAAACGGCG GACAGCTAG

Peptide Sequence

PEP ID	Zm00001d011210_P066
PEP Infomation	pep chromosome:B73_RefGen_v4:8:143025412:143027608:1 gene:Zm00001d011210 transcript:Zm00001d011210_T066 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lycopene epsilon cyclase1 description: lycopene epsilon cyclase1
Sequence	MKCAPDYCNIYVVAKGKSVNVRLAKCGVPPMHTGADIASDTDSLRESVLYMRRGSRGHLP RVTPDAWRSIDGRTPPELSTRPLFRERLLSSSATTKNFVVLPGKDNFETSSRSARHDSLG GDLDFGPSTRFSYIDLGENLDMSTTLPALEPMSPATGAQRDTEAEMRRLRLELKQTMDMY NAACKEAINAKQRAKEMHMMKLEEARRLEEARNAEEAALAVAEMEKAKCRAAMEAAEAAQ RLADLEAQRRRNAEVRARREADEKVRALDAISNHDFRYRKYHIDEIEMATERFSDELKIG EGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFLQEVEVLSCIRHPNMVLLLGACPEYGC LVYEYMDHGSLEDRLFRRGGTPPLAWAQRFRIAAEIATALLFLHQTKPEPLVHRDLKPAN ILLDRNYVSKISDVGLARLVPPSVADNVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIY SLGVLLLQVVTARPPMGLTHHVEKAIDAGTFEQMLDITVKDWPVEEALGYAKLALKCTEM RRRDRPDLATVILPELNRLRNLGHAYEARMSAARANGGSGESGAQISGDSTTVGGSWETA DS

Transcript Sequence

Transcript ID	Zm00001d011210_T066
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:143025412:143027608:1 gene:Zm00001d011210 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lycopene epsilon cyclase1 description: lycopene epsilon cyclase1
Sequence	AAGATGATTATATTGTTGGTGAAATCGTATCGACGCTGCTGCTGCTAGCAGGTGGAAGTA TCCGAGGTAGTATTGGAAGAGGCAGACGTGTCCAAAGCCATTCTAGGTTACATCACTGCA AACAAGATCCAGAGCATTGCGCTCGGCGGAGCCAACAGAAATGCGTTCACCAAGAAATTC AAGAACGCGGACGTGCCGTCGACCCTGATGAAGTGCGCTCCAGACTACTGCAACATCTAC GTCGTGGCCAAGGGCAAGTCCGTCAATGTCAGGCTCGCCAAGTGCGGCGTCCCGCCGATG CACACTGGCGCCGACATCGCTTCGGACACCGACTCCCTCCGGGAATCGGTGCTCTACATG CGACGCGGCTCCAGGGGGCACCTGCCGCGGGTGACGCCTGACGCCTGGCGCTCCATTGAC GGGCGCACACCGCCGGAGCTATCCACGCGGCCACTGTTCCGCGAGCGCTTGCTCTCGTCA TCGGCCACCACCAAGAACTTTGTCGTCCTGCCAGGAAAGGACAACTTCGAGACGTCCTCC CGCTCGGCGAGACACGACTCGTTAGGCGGCGACCTCGACTTCGGCCCGAGCACGCGCTTC TCCTACATAGACTTGGGCGAGAACCTCGATATGTCCACCACTCTCCCCGCTCTGGAACCC ATGTCACCGGCCACCGGCGCGCAGCGGGATACCGAGGCCGAGATGCGGCGGCTCCGGTTG GAGCTCAAGCAGACCATGGACATGTACAACGCGGCGTGCAAGGAGGCCATCAACGCCAAG CAGCGGGCCAAGGAGATGCATATGATGAAGCTGGAGGAAGCGCGTCGGCTGGAGGAGGCC AGGAACGCCGAGGAGGCTGCTCTGGCAGTGGCCGAGATGGAGAAGGCCAAGTGCCGCGCG GCCATGGAGGCCGCCGAGGCGGCGCAGAGGCTGGCTGACCTGGAGGCGCAGCGGCGCCGC AACGCCGAGGTGCGCGCGCGCCGGGAGGCCGACGAGAAGGTGCGCGCTCTGGATGCCATT TCCAACCACGACTTCCGGTACCGCAAGTACCACATCGACGAGATCGAGATGGCCACGGAG CGCTTCTCCGACGAGCTCAAAATCGGCGAGGGCGGCTACGGCCCCGTCTACCGCGCCTCC CTCGACCACACCCCCGTCGCCATCAAGGTGCTCCGGCCCGACGCGCACCAGGGGAGGAAG CAGTTCCTGCAGGAGGTGGAGGTGCTCAGCTGCATCCGCCACCCCAACATGGTGCTCCTC CTCGGCGCATGCCCGGAGTACGGCTGTCTCGTGTACGAGTACATGGACCACGGCAGCCTC GAGGACCGGCTGTTCCGTCGGGGCGGCACGCCGCCGCTCGCGTGGGCCCAGCGGTTCCGG ATCGCGGCGGAGATCGCGACGGCGCTGCTGTTCCTGCACCAAACGAAGCCGGAGCCGCTG GTGCACCGGGACCTGAAGCCGGCCAACATCCTGCTGGACCGCAACTACGTGAGCAAGATC AGCGACGTCGGGCTGGCACGCCTGGTGCCGCCGTCGGTGGCGGACAACGTGACGCAGTAC CGGCTGACGGCGACGGCGGGCACCTTCTGCTACATCGACCCGGAGTACCAGCAGACGGGC AAGCTGGGCGTCAAGTCGGACATCTACTCCCTCGGCGTGCTCCTGCTGCAGGTGGTCACC GCGCGGCCACCCATGGGGCTCACGCATCACGTCGAGAAGGCCATCGACGCGGGCACCTTT GAGCAGATGCTCGACATCACCGTCAAGGACTGGCCCGTCGAGGAGGCGCTCGGCTACGCC AAGCTCGCGCTCAAGTGCACGGAGATGCGGCGGAGGGACCGGCCGGACCTCGCCACAGTC ATACTGCCGGAGCTCAACCGGTTAAGGAACCTCGGCCACGCGTACGAGGCACGCATGAGC GCCGCCAGGGCCAACGGTGGAAGTGGAGAGAGTGGTGCCCAGATCAGCGGGGACTCGACA ACGGTGGGTGGTTCATGGGAAACGGCGGACAGCTAGCGGGCGGTCCGGT