Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011199_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:142755423:142759090:-1 gene:Zm00001d011199 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc ion binding
Sequence

ATGGTGTGGTTCCAATGCGAGGACTGTGGCGAGAACCTCAAGAAGCCCAAACTTGCCGGC
CACTTCCGCTCCTGCTCCGCGTACAAGCTGTCATGCATCGATTGCGGCGAGTTATTCAGC
CACGACACCGTGCAGGGGCACACCCAGTGCATCTCCGAGGCCGAGAAGTACGGTCCTAAG
GGACAGACCAAACCATCCAATGGTGCACAGGGTAAGGCAGATAAGCCAAAGCCAAATGCA
GATGTCGATATCAATGTTGGGCTGTCGACACGGCCTCCTTGGTTCTGTAGAACAGTGGTA
CTTATTGTGAATTTGCATGACAGCCTATGCAAGACCACTACCACAAGTAAGCAAACTCTC
TTACTACATGCTGATGGGAAGAAGCATAGGGCAAAGGCGAAAGCCTTCCATGTGTCTCAG
AAACAAAAAGATGGTGCAGAACAAACTCCAGATGTGAAGGAAGCTGGAGTTGTACCCACA
AAAGAATCTGCTCAAGTAAATGGTGGCGTGAGTGGTGATCATGAAAGAAATGAAGATAAA
GATGCTGGGAAAAGGAAACGAATGGATGACATGACCATAGAGCCAGGTAACACAAAAAGA
CAGTTGACACAGTCTGGAGATGAGAAGTCAGAAAACAAAGCGAAGAGTAAGGCCGATGAA
CTAGCAAGTGGTACCGACTGCAAAAGTGTTCAAAAGCAAAAGATCAAATGGAAGAAGATT
ATTACTAAAACATTGAAGGCGAACGCAGATGGAGTTATGAAGCTAAAGAAGCTACAAAAG
CTAGTCTCCAAGGAGCTTCAGGAATGTGGTGTCTCCAAAGACAAGGAGGAGCTCCGTGCT
ACCTTGATGGATAAAATAGCTTCAAGTTCCAGATTTTATGTTGATGGCAAGAATGTTAGA
CTGGTGGCCAAGAATGAAGAAGAATCTTAG

Peptide Sequence

PEP ID

Zm00001d011199_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:142755423:142759090:-1 gene:Zm00001d011199 transcript:Zm00001d011199_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc ion binding
Sequence

MVWFQCEDCGENLKKPKLAGHFRSCSAYKLSCIDCGELFSHDTVQGHTQCISEAEKYGPK
GQTKPSNGAQGKADKPKPNADVDINVGLSTRPPWFCRTVVLIVNLHDSLCKTTTTSKQTL
LLHADGKKHRAKAKAFHVSQKQKDGAEQTPDVKEAGVVPTKESAQVNGGVSGDHERNEDK
DAGKRKRMDDMTIEPGNTKRQLTQSGDEKSENKAKSKADELASGTDCKSVQKQKIKWKKI
ITKTLKANADGVMKLKKLQKLVSKELQECGVSKDKEELRATLMDKIASSSRFYVDGKNVR
LVAKNEEES

Transcript Sequence

Transcript ID

Zm00001d011199_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:142755423:142759090:-1 gene:Zm00001d011199 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc ion binding
Sequence

CTCTCGAGAGGGCCACACACAAAAACCCCAATGCGAGCGCCCCTGGCTTGTCGGCGTCGC
CTCCTTCAGCCAAAACCCTAGCTTGCATACGCGCCCGAACAAAGCTTCGTCTGCGAGGGG
CGTCCTCCTGCCGCCAGAAGCTTTCAGGAGCATCAGCGATGGTGTGGTTCCAATGCGAGG
ACTGTGGCGAGAACCTCAAGAAGCCCAAACTTGCCGGCCACTTCCGCTCCTGCTCCGCGT
ACAAGCTGTCATGCATCGATTGCGGCGAGTTATTCAGCCACGACACCGTGCAGGGGCACA
CCCAGTGCATCTCCGAGGCCGAGAAGTACGGTCCTAAGGGACAGACCAAACCATCCAATG
GTGCACAGGGTAAGGCAGATAAGCCAAAGCCAAATGCAGATGTCGATATCAATGTTGGGC
TGTCGACACGGCCTCCTTGGTTCTGTAGAACAGTGGTACTTATTGTGAATTTGCATGACA
GCCTATGCAAGACCACTACCACAAGTAAGCAAACTCTCTTACTACATGCTGATGGGAAGA
AGCATAGGGCAAAGGCGAAAGCCTTCCATGTGTCTCAGAAACAAAAAGATGGTGCAGAAC
AAACTCCAGATGTGAAGGAAGCTGGAGTTGTACCCACAAAAGAATCTGCTCAAGTAAATG
GTGGCGTGAGTGGTGATCATGAAAGAAATGAAGATAAAGATGCTGGGAAAAGGAAACGAA
TGGATGACATGACCATAGAGCCAGGTAACACAAAAAGACAGTTGACACAGTCTGGAGATG
AGAAGTCAGAAAACAAAGCGAAGAGTAAGGCCGATGAACTAGCAAGTGGTACCGACTGCA
AAAGTGTTCAAAAGCAAAAGATCAAATGGAAGAAGATTATTACTAAAACATTGAAGGCGA
ACGCAGATGGAGTTATGAAGCTAAAGAAGCTACAAAAGCTAGTCTCCAAGGAGCTTCAGG
AATGTGGTGTCTCCAAAGACAAGGAGGAGCTCCGTGCTACCTTGATGGATAAAATAGCTT
CAAGTTCCAGATTTTATGTTGATGGCAAGAATGTTAGACTGGTGGCCAAGAATGAAGAAG
AATCTTAGAAAGAGGTTGTCAGTCATTTTTTTGGCATTGTTGCTGGTTTCATTCTTTGGT
GTCAACTTTCAGATGGCTTATAGCCAAGTGTTGGTTAAATTGAGTCCATGAACCATCAAT
TATATCCATGACGTGTAGACGGTATGGGAATTTAGCATCTGAATTTTCTCGACAACCGTT
CAAAAGTGAAATGTTTACTCTTTATGCTGTCAAGCAATGGCAATGATGGTTGATAGTGGC
GGCGTAGTCGCAGGGGAGAGATGAGAGATGATACAAATAATGTTCATTGGATTTGAGTAA
GGGAGAAGATGTTATGTAGTGCTCTGAACCATCGATTTTGATGGTGTGATAATTCTGGGT
GCAATTCGTTTGGTGGATTTAGTAGATA