Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011192_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:142593269:142598210:1 gene:Zm00001d011192 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbamoyl-phosphate synthase large chain chloroplastic
Sequence	ATGGCCACCTCGCTCTCCACCCCGTCGCAGCTCCGCACCTCACACTGCCACGCCCGCCGC TACGGCCGCCTCCTCGGCCTCCACCCGCGCGTCTCCTGCGCGCGCTGCCCGGCTCCCCGC CGCGCCGCCGCCCTCTCCGTGCGCGCCAACGCCGCCTCGACTGATGGCGACGCTGCCGTC ACGGTGCGCCGCTTCCCGGCCGCGCCGACCAAGGCTGGGCGGCTCGCGGGCGTCAAGAAG ATCATGATCCTCGGCGCGGGGCCCATCGTCATCGGTCAGGCGTGCGAGTTCGACTACTCC GGCACGCAGGCGTGCAAAGCGCTTGCCGAGGAGGGCTACGAGGTGGTGCTCGTCAACTCC AACCCGGCAACCATCATGACCGACCCGGGACTCGCCCACCGCACCTACATCGGGCCCATG ACGCCGCCGCTCGTCGAGCGCATCATCGACGCCGAGCGCCCCGACGCGCTGCTCCCCACC ATGGGCGGCCAGACCGCGCTCAACCTCGCGGTCTCGCTCGCGGACTCGGGCGCGCTCGAC CGCCTCGGGGTGCGCCTCATCGGGGCATCCCTCCCCGCCATCCGCGCCGCCGAGGACAGG CAGCTCTTCAAGCAGGCCATGGACCGCATCGGCCTCAAAACGCCGCCCTCCGGCATCGGC ACCACGCTTGAGGAGTGCCTCGCCATCGCCGAGGACATCGGGGAGCTACCGCTCATTGTG CGCCCGGCCTTCACTCTCGGGGGCACGGGCGGTGGCATCGCTTACAACAAGGCCGAGTTT GAGGACATCTGCAGGGCCGGCCTCGCCGCGTCGCACACTCAGCAGGTGCTCGTCGAGAAG TCGCTCCTGGGCTGGAAGGAGTACGAGCTGGAGGTCATGCGCGACATGGCTGACAATGTC GTCATCATCTGCTCCATCGAGAACATCGATCCCATGGGAGTGCACACGGGGGACTCCATT ACCGTGGCTCCTGCGCAGACACTCACTGACAAGGAGTACCAGAGGCTCAGGGACTACTCG GTGGCCATCATTAGGGAGATTGGTGTGGAGTGTGGTGGTTCCAATGTGCAATTTGCAGTC AATCCTGCTGATGGGGAGGTGATGGTCATCGAGATGAATCCCAGGGTGTCCAGGTCGTCT GCACTTGCCTCAAAGGCGACAGGGTTCCCCATAGCCAAGATGGCTGCGAAGCTCTCAGTA GGCTACACTCTAGATCAGATTCCCAATGATATTACCAAGAAGACTCCAGCTTTTGAGAAA TTCCCTGGCTCTGAGCCAATATTAACCACACAGATGAAGTCTGTTGGTGAGGCGATGGCA TTGGGGCGTACCTTCCAGGAATCCTTCCAGAAAGCTGTCCGCTCACTGGAGACTGGTTTT GCGGGATGGGGTTGTGGCCCTATCAAGGAACTTGATTGGGACTGGGAAAAGATAAAATAT AGCTTGCGGGTACCTAATCCAGATCGTATCCATGCTATCTATGCAGCTTTCAAGAAAGGC ATGAGGGTCGAAGATATCCATGAAATTAGCTTCATTGACAAATGGTTTCTTACAGAGCTC AAGGGGCTAGTGGATGTAGAGCAGTTCCTTTTATCAAAGAGCCTAGATCAGTTGTCAAAG GATGACTTTTACCAAGTGAAGAAGAGGGGGTTTAGCGACAAGCAGATTGCATTTGCAACT TCTTCATCAGAAAGTGATGTGAGATCAAGGCGTTTGACATTAGGCGTCACTCCGACATAT AAACGTGTTGATACTTGCGCTGCTGAATTTGAAGCCAACACCCCCTACATGTACTCTTCC TATGAGTACGAATGTGAATCATCTCCAACCAATAGGAAGAAGGTGCTGATATTGGGTGGT GGGCCAAATCGCATAGGCCAGGGCATTGAGTTTGATTACTGTTGTTGCCATGCATCATTT GCACTTCGAGAGGCTGGATACGAGACTATTATGATGAACTCCAATCCTGAGACAGTCTCA ACTGACTATGATACCAGTGATCGTTTGTACTTTGAGCCACTGACAGTTGAGGATGTATCA AATGTCCTTGATTTAGAGCGCCCAGATGGTATAATCGTGCAATTTGGAGGGCAAACTCCT CTAAAGCTTGCGCTACCTATTCAACAGTACATAGAGGAGAACAAAATGGTGTCTGCTTCA GGCACTGGGAATGTTAAGATATGGGGAACATCACCAGATTCCATTGATGCTTCTGAGGAC AGAAAAAGATTTAATGCAATTCTCGAGGAGCTTCAAATTGAACAGCCAAAGGGAGGGATT GCAAGAAGTGAGTCTGATGCCTTGGCAATCGCCTCAGAAGTAGGTTACCCTGTTGTGGTC CGTCCATCATATGTTCTTGGTGGACGGGCAATGGAGATTGTGTACAACGACGAAAAACTG ATCAAGTACCTCGCAACCGCGGTGCAAGTAGATCCAGAAAGGCCTGTTTTAGTGGACAAA TATCTAATTGATGCAGTTGAGATTGATGTTGATGCATTGGCTGACACAGCTGGGAATGTT GTGATTGGTGGAATTATGGAGCATATTGAGCAGGCTGGTATACATTCCGGTGATTCAGCA TGTTCTCTTCCTACTAGAACAGTCTCAGCCCAATGCCTGGAAGTTATCCGTTCATGGACC ACAAAGCTCGCTAAGCGTCTGAATGTTTGTGGACTAATGAACTGTCAGTATGCTATATCT ACTTCTGGTGATGTGTTCCTACTTGAGGCGAACCCTCGTGCTTCACGCACAGTCCCTTTT GTATCCAAGGCGATTGGCCATCCGCTAGCTAAATATGCATCATTGATCATGTCTGGTGTG ACCTTGCCGGAGCTCGGGTTCACTAAAGAAGTGATTCCTAAGCATGTGTCTGTTAAGGAG GCTGTTCTTCCATTCGAGAAATTCCAAGGGTGCGACATTCTTCTTGGACCAGAGATGCGC AGCACTGGAGAGGTGATGGGCATCGACTATGAGTTCTCCGGTGCCTTTGCAAAAGCACAG ATTGCCGCTGGGCAGAAGCTCCCCTTAAGTGGCACTGTGTTCCTTAGCCTGAACGATTTG ACGAAACGACATCTTGCTGAGATTGGGAGTGGATTCCGGGAGCTTGGCTTCAGCATCATT GCCACATCTGGAACAGCCAAAGTTCTCCAGCTCGAGGGCGTTCCAGTGGAGCCGGTGCTA AAAATACATGAGGGGCGACCGAATGCCAGGGATATGCTGAAGAATGGTCAGATACAGATC ATGGTGATAACAAGCTCTGGTGATGCTCTTGACTCCAAAGACGGTCTCCAGCTTCGTAGG CTTGCCCTCGCCTACAAGGTGCCAATTATCACAACCGTCGACGGCGCACGTGCCTCCATA GATGCCATCAAGAGCTTGAAGGACAAGTCGATTGAGATCCTCGCCTTGCAAGATTACTTC CAGACTGCCGATGCTTCGGCAGATTTACAAGCAGCGGCACAGACCACCCCTTAG

Peptide Sequence

PEP ID	Zm00001d011192_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:142593269:142598210:1 gene:Zm00001d011192 transcript:Zm00001d011192_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbamoyl-phosphate synthase large chain chloroplastic
Sequence	MATSLSTPSQLRTSHCHARRYGRLLGLHPRVSCARCPAPRRAAALSVRANAASTDGDAAV TVRRFPAAPTKAGRLAGVKKIMILGAGPIVIGQACEFDYSGTQACKALAEEGYEVVLVNS NPATIMTDPGLAHRTYIGPMTPPLVERIIDAERPDALLPTMGGQTALNLAVSLADSGALD RLGVRLIGASLPAIRAAEDRQLFKQAMDRIGLKTPPSGIGTTLEECLAIAEDIGELPLIV RPAFTLGGTGGGIAYNKAEFEDICRAGLAASHTQQVLVEKSLLGWKEYELEVMRDMADNV VIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSNVQFAV NPADGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITKKTPAFEK FPGSEPILTTQMKSVGEAMALGRTFQESFQKAVRSLETGFAGWGCGPIKELDWDWEKIKY SLRVPNPDRIHAIYAAFKKGMRVEDIHEISFIDKWFLTELKGLVDVEQFLLSKSLDQLSK DDFYQVKKRGFSDKQIAFATSSSESDVRSRRLTLGVTPTYKRVDTCAAEFEANTPYMYSS YEYECESSPTNRKKVLILGGGPNRIGQGIEFDYCCCHASFALREAGYETIMMNSNPETVS TDYDTSDRLYFEPLTVEDVSNVLDLERPDGIIVQFGGQTPLKLALPIQQYIEENKMVSAS GTGNVKIWGTSPDSIDASEDRKRFNAILEELQIEQPKGGIARSESDALAIASEVGYPVVV RPSYVLGGRAMEIVYNDEKLIKYLATAVQVDPERPVLVDKYLIDAVEIDVDALADTAGNV VIGGIMEHIEQAGIHSGDSACSLPTRTVSAQCLEVIRSWTTKLAKRLNVCGLMNCQYAIS TSGDVFLLEANPRASRTVPFVSKAIGHPLAKYASLIMSGVTLPELGFTKEVIPKHVSVKE AVLPFEKFQGCDILLGPEMRSTGEVMGIDYEFSGAFAKAQIAAGQKLPLSGTVFLSLNDL TKRHLAEIGSGFRELGFSIIATSGTAKVLQLEGVPVEPVLKIHEGRPNARDMLKNGQIQI MVITSSGDALDSKDGLQLRRLALAYKVPIITTVDGARASIDAIKSLKDKSIEILALQDYF QTADASADLQAAAQTTP

Transcript Sequence

Transcript ID	Zm00001d011192_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:142593269:142598210:1 gene:Zm00001d011192 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbamoyl-phosphate synthase large chain chloroplastic
Sequence	CCCTACCTTCCTCATCCAGACACTCCCCTTGCGCCGCCATGGCCACCTCGCTCTCCACCC CGTCGCAGCTCCGCACCTCACACTGCCACGCCCGCCGCTACGGCCGCCTCCTCGGCCTCC ACCCGCGCGTCTCCTGCGCGCGCTGCCCGGCTCCCCGCCGCGCCGCCGCCCTCTCCGTGC GCGCCAACGCCGCCTCGACTGATGGCGACGCTGCCGTCACGGTGCGCCGCTTCCCGGCCG CGCCGACCAAGGCTGGGCGGCTCGCGGGCGTCAAGAAGATCATGATCCTCGGCGCGGGGC CCATCGTCATCGGTCAGGCGTGCGAGTTCGACTACTCCGGCACGCAGGCGTGCAAAGCGC TTGCCGAGGAGGGCTACGAGGTGGTGCTCGTCAACTCCAACCCGGCAACCATCATGACCG ACCCGGGACTCGCCCACCGCACCTACATCGGGCCCATGACGCCGCCGCTCGTCGAGCGCA TCATCGACGCCGAGCGCCCCGACGCGCTGCTCCCCACCATGGGCGGCCAGACCGCGCTCA ACCTCGCGGTCTCGCTCGCGGACTCGGGCGCGCTCGACCGCCTCGGGGTGCGCCTCATCG GGGCATCCCTCCCCGCCATCCGCGCCGCCGAGGACAGGCAGCTCTTCAAGCAGGCCATGG ACCGCATCGGCCTCAAAACGCCGCCCTCCGGCATCGGCACCACGCTTGAGGAGTGCCTCG CCATCGCCGAGGACATCGGGGAGCTACCGCTCATTGTGCGCCCGGCCTTCACTCTCGGGG GCACGGGCGGTGGCATCGCTTACAACAAGGCCGAGTTTGAGGACATCTGCAGGGCCGGCC TCGCCGCGTCGCACACTCAGCAGGTGCTCGTCGAGAAGTCGCTCCTGGGCTGGAAGGAGT ACGAGCTGGAGGTCATGCGCGACATGGCTGACAATGTCGTCATCATCTGCTCCATCGAGA ACATCGATCCCATGGGAGTGCACACGGGGGACTCCATTACCGTGGCTCCTGCGCAGACAC TCACTGACAAGGAGTACCAGAGGCTCAGGGACTACTCGGTGGCCATCATTAGGGAGATTG GTGTGGAGTGTGGTGGTTCCAATGTGCAATTTGCAGTCAATCCTGCTGATGGGGAGGTGA TGGTCATCGAGATGAATCCCAGGGTGTCCAGGTCGTCTGCACTTGCCTCAAAGGCGACAG GGTTCCCCATAGCCAAGATGGCTGCGAAGCTCTCAGTAGGCTACACTCTAGATCAGATTC CCAATGATATTACCAAGAAGACTCCAGCTTTTGAGAAATTCCCTGGCTCTGAGCCAATAT TAACCACACAGATGAAGTCTGTTGGTGAGGCGATGGCATTGGGGCGTACCTTCCAGGAAT CCTTCCAGAAAGCTGTCCGCTCACTGGAGACTGGTTTTGCGGGATGGGGTTGTGGCCCTA TCAAGGAACTTGATTGGGACTGGGAAAAGATAAAATATAGCTTGCGGGTACCTAATCCAG ATCGTATCCATGCTATCTATGCAGCTTTCAAGAAAGGCATGAGGGTCGAAGATATCCATG AAATTAGCTTCATTGACAAATGGTTTCTTACAGAGCTCAAGGGGCTAGTGGATGTAGAGC AGTTCCTTTTATCAAAGAGCCTAGATCAGTTGTCAAAGGATGACTTTTACCAAGTGAAGA AGAGGGGGTTTAGCGACAAGCAGATTGCATTTGCAACTTCTTCATCAGAAAGTGATGTGA GATCAAGGCGTTTGACATTAGGCGTCACTCCGACATATAAACGTGTTGATACTTGCGCTG CTGAATTTGAAGCCAACACCCCCTACATGTACTCTTCCTATGAGTACGAATGTGAATCAT CTCCAACCAATAGGAAGAAGGTGCTGATATTGGGTGGTGGGCCAAATCGCATAGGCCAGG GCATTGAGTTTGATTACTGTTGTTGCCATGCATCATTTGCACTTCGAGAGGCTGGATACG AGACTATTATGATGAACTCCAATCCTGAGACAGTCTCAACTGACTATGATACCAGTGATC GTTTGTACTTTGAGCCACTGACAGTTGAGGATGTATCAAATGTCCTTGATTTAGAGCGCC CAGATGGTATAATCGTGCAATTTGGAGGGCAAACTCCTCTAAAGCTTGCGCTACCTATTC AACAGTACATAGAGGAGAACAAAATGGTGTCTGCTTCAGGCACTGGGAATGTTAAGATAT GGGGAACATCACCAGATTCCATTGATGCTTCTGAGGACAGAAAAAGATTTAATGCAATTC TCGAGGAGCTTCAAATTGAACAGCCAAAGGGAGGGATTGCAAGAAGTGAGTCTGATGCCT TGGCAATCGCCTCAGAAGTAGGTTACCCTGTTGTGGTCCGTCCATCATATGTTCTTGGTG GACGGGCAATGGAGATTGTGTACAACGACGAAAAACTGATCAAGTACCTCGCAACCGCGG TGCAAGTAGATCCAGAAAGGCCTGTTTTAGTGGACAAATATCTAATTGATGCAGTTGAGA TTGATGTTGATGCATTGGCTGACACAGCTGGGAATGTTGTGATTGGTGGAATTATGGAGC ATATTGAGCAGGCTGGTATACATTCCGGTGATTCAGCATGTTCTCTTCCTACTAGAACAG TCTCAGCCCAATGCCTGGAAGTTATCCGTTCATGGACCACAAAGCTCGCTAAGCGTCTGA ATGTTTGTGGACTAATGAACTGTCAGTATGCTATATCTACTTCTGGTGATGTGTTCCTAC TTGAGGCGAACCCTCGTGCTTCACGCACAGTCCCTTTTGTATCCAAGGCGATTGGCCATC CGCTAGCTAAATATGCATCATTGATCATGTCTGGTGTGACCTTGCCGGAGCTCGGGTTCA CTAAAGAAGTGATTCCTAAGCATGTGTCTGTTAAGGAGGCTGTTCTTCCATTCGAGAAAT TCCAAGGGTGCGACATTCTTCTTGGACCAGAGATGCGCAGCACTGGAGAGGTGATGGGCA TCGACTATGAGTTCTCCGGTGCCTTTGCAAAAGCACAGATTGCCGCTGGGCAGAAGCTCC CCTTAAGTGGCACTGTGTTCCTTAGCCTGAACGATTTGACGAAACGACATCTTGCTGAGA TTGGGAGTGGATTCCGGGAGCTTGGCTTCAGCATCATTGCCACATCTGGAACAGCCAAAG TTCTCCAGCTCGAGGGCGTTCCAGTGGAGCCGGTGCTAAAAATACATGAGGGGCGACCGA ATGCCAGGGATATGCTGAAGAATGGTCAGATACAGATCATGGTGATAACAAGCTCTGGTG ATGCTCTTGACTCCAAAGACGGTCTCCAGCTTCGTAGGCTTGCCCTCGCCTACAAGGTGC CAATTATCACAACCGTCGACGGCGCACGTGCCTCCATAGATGCCATCAAGAGCTTGAAGG ACAAGTCGATTGAGATCCTCGCCTTGCAAGATTACTTCCAGACTGCCGATGCTTCGGCAG ATTTACAAGCAGCGGCACAGACCACCCCTTAGTGCTGTCTTCCTTTTCCATGTACTGTGA TCCTAGCTCGAGCCAAAACAACATCCCATATGAATTATTTTGTTTACGGTTGCACCTGCA GCATGCATGGCGCAAGGACAGGCATCCAGATCGTATCGGTGACAAGCATAGCTAGACAGA ATTGGTATTGGGCGAATGTAGTTGTACTCTGTAATGTTAGTTAGGGTGATGAGCATCCAC AATAAGGCTTCCCAACTGCGATTTTGATGACTATCATATTCTTTGTGGAGATTTACATTG TATCATTGTCGCATACGAAACTGTGCGACATACATGTACCGTATGCATGTTATCA