Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011158_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:8:141169277:141194760:1 gene:Zm00001d011158 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 10 description:RING/FYVE/PHD-type zinc finger family protein
Sequence

ATGATTGACGATGAGGAAAGCCAAGGGATTAAGAAGGTGCATTTCAGGGATTCGTTCTCC
CAGCACCCTATAGTTACCTACAAGAGGCGTCGGCAGCAGAAGCCACAGACGCAGCAGCAA
TTACGGCAACCACCGCCATCCCTACAGCAGCATCCGGAGCCACAGCTACAGGTGAAGCTG
GAGCCAAAGACTGAAGATGTGCCGGAACAGCAGAATAACGATACTTTTTGGAAAAGTAGA
GATATGGGATGGAAGTATGGCATAATGATTGATGAAAATAGACAACACTGGAAGTGTATG
TATTGTGGTCTAATTAGGTATGGTGGTGGTGTATCTAGACTCAAACGACATCTAGCTGGT
GATTTAGATGTCAAAATGTGCCCTGAAGTTCCAGCAGATGTTGTTGAGGAGATAAGGGAG
CATTTGCGGAAGAAACGAGAGAGACGGAGGAAGCGAGCTGCACAAAATGGTGGTGACAAT
GTAAAGGCTAAGAACCCTTCTGGTGATGCTAATGTTGAGAAGGATCTTCTACCTTCTAAT
TCAGTGCTTCCTGATGGAATGGATACTAATGTTCTTGAAGAAGTCACTAACCAAACGGGT
TCGGTTCACCACGAGACTACTCCCAGGTTTCCGATATTGAGAGCAAGGGATATTGGCTGG
GAGCATGCTGTGGATCTTGATGGAAATAAAAGACGGTGGCAATGCAAGTTCTGTTCTCTA
TGTCGAAGTGGTGGTGTAACTACTTTGAAGGCTCATCTCATTGATGACAGCTGCCCAAAC
GTTCCAAAGGAAATTTCAAAGAAAGTATCAAACTTCATTGAAGAGAAAAGAGCAACACGC
CTTCTTTTGAATAATTATGTCTTTAATGTTGATGAGGACTTCAACACAATACTTCAAGAA
GGGACTGTAGAATATGTAAATGAACAACAACCTTCAAGAAAGGCTACATATGTGCAAACA
TTATCTAAGTGTGCTATTAATGAGATAGCAGCGGGAAGCAAGCAATGTGGTGCAGAATGT
AGTGGCCAGCCAGTTGAGCATTGTGATCAGCCTGAAGAGCAGTGCACAATGGATTATGGC
AGGATGGATCGATTGACTAGCAATAAGAACCAGATTTTGGACAAGAATACTGAGAATTCA
AAAAATACAAAGATGTTGAAACCATGCCGGAAAAGTGAGTTTAACACAAGGAAGCACATA
ATTATTGTTGATAAAATTGGGAGGCATTGGAAGTGTAGATACTGTGGCATGGATGTGTAT
GGTAAAAAGTTTCAGCTCCATTATCATCTAGCTGGTGCATTTCGTCAGGCTAAGTGTCCA
AATGTTCCTAGAGAAGTTTTTGCAAAAGCAAGACAGCATGTTCTGACAAAGAAAATGCTA
AAAAAGAGTAAAGCTGAGCAACAGATTCCTTCTAGTCCACATATTCTTGCCCAATCTGGT
GAAGAACGGCAGAACAATGATCCATTTTGTGGGAATCAGTCTCAACTGTCAATAAACAAT
GAACCTAGGGAGGTACACAATTACCCTGCAGTGCTAAGGGACAGTGCATGGGAACATTCT
CTGATATATGAGAAAGAAAACGGACACTGGAAGTGCAAGTGGTGCAGTATTGAGGGTGAT
CATGGTTTAACTAGATTGATGTGGCATCTTGTTGGATGGCAGAATCGACCTCAGTGCCCA
AATATACCAAAGGATGTTGCTGAAAAGATGAAGGATCAAATGATGTCAAAGAAGGAGCAG
AAAGCGAGATCAGGTTTGTTTGACGGCAATGGCTGTTGTGAGGTGTTGTGCTCTTCTAAT
AGTTCACAACTTGATCAGAACCATCTCACTGCAAGAATACATGACAGATGTTCTTCCCAG
GCTTTTGACCATGCTAACAGTGAATTAAAAGGATGCAACATGTTATCCAATACTATTCTT
TCACAACAGAGTTCCAATCCTCAGGTGCATCATGAGGATCCTCAGGTGTGTCATGAGCAA
GAGAGGAAGGAGGTTGCCACCTCTTCAGAACCTGGCTGTGAGCAAGGTCAGAGGATGCAG
TGGCAGTCGCAAAATAAGCCAATGATGGAAGGACCTCATGACAATGGATTATGTGGTGAC
ACAAACCAGTTGGAGGAACAAAAAAGTGGCTTTGGAATTAGTGACTGCTGGAGGTACCTG
ACAAAATGGAAATGGATTGTGATAAAACAGTGGATGCGAACACTGCTAAGTGCCAGAATA
TTCTTAAGGATGTTTTAA

Peptide Sequence

PEP ID

Zm00001d011158_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:8:141169277:141194760:1 gene:Zm00001d011158 transcript:Zm00001d011158_T016 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 10 description:RING/FYVE/PHD-type zinc finger family protein
Sequence

MIDDEESQGIKKVHFRDSFSQHPIVTYKRRRQQKPQTQQQLRQPPPSLQQHPEPQLQVKL
EPKTEDVPEQQNNDTFWKSRDMGWKYGIMIDENRQHWKCMYCGLIRYGGGVSRLKRHLAG
DLDVKMCPEVPADVVEEIREHLRKKRERRRKRAAQNGGDNVKAKNPSGDANVEKDLLPSN
SVLPDGMDTNVLEEVTNQTGSVHHETTPRFPILRARDIGWEHAVDLDGNKRRWQCKFCSL
CRSGGVTTLKAHLIDDSCPNVPKEISKKVSNFIEEKRATRLLLNNYVFNVDEDFNTILQE
GTVEYVNEQQPSRKATYVQTLSKCAINEIAAGSKQCGAECSGQPVEHCDQPEEQCTMDYG
RMDRLTSNKNQILDKNTENSKNTKMLKPCRKSEFNTRKHIIIVDKIGRHWKCRYCGMDVY
GKKFQLHYHLAGAFRQAKCPNVPREVFAKARQHVLTKKMLKKSKAEQQIPSSPHILAQSG
EERQNNDPFCGNQSQLSINNEPREVHNYPAVLRDSAWEHSLIYEKENGHWKCKWCSIEGD
HGLTRLMWHLVGWQNRPQCPNIPKDVAEKMKDQMMSKKEQKARSGLFDGNGCCEVLCSSN
SSQLDQNHLTARIHDRCSSQAFDHANSELKGCNMLSNTILSQQSSNPQVHHEDPQVCHEQ
ERKEVATSSEPGCEQGQRMQWQSQNKPMMEGPHDNGLCGDTNQLEEQKSGFGISDCWRYL
TKWKWIVIKQWMRTLLSARIFLRMF

Transcript Sequence

Transcript ID

Zm00001d011158_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:141169277:141194760:1 gene:Zm00001d011158 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 10 description:RING/FYVE/PHD-type zinc finger family protein
Sequence

GCCGCAGTTCCGTTTCACATCCCATCCTCTCCATTTCCACCCCCTCCCATGGCCTGATTT
CCGAGCCCCCCCGCCATTCGCCCCGCCCCCGAATCCGCCGTCTCATCGAACGCCCGGTGC
CGTGGGGAGAAGCGAGGCTCCGGTTCTTTGTTTCTTGGCGGCCGAAATATAAGGGAATAT
GATTGACGATGAGGAAAGCCAAGGGATTAAGAAGGTGCATTTCAGGGATTCGTTCTCCCA
GCACCCTATAGTTACCTACAAGAGGCGTCGGCAGCAGAAGCCACAGACGCAGCAGCAATT
ACGGCAACCACCGCCATCCCTACAGCAGCATCCGGAGCCACAGCTACAGGTGAAGCTGGA
GCCAAAGACTGAAGATGTGCCGGAACAGCAGAATAACGATACTTTTTGGAAAAGTAGAGA
TATGGGATGGAAGTATGGCATAATGATTGATGAAAATAGACAACACTGGAAGTGTATGTA
TTGTGGTCTAATTAGGTATGGTGGTGGTGTATCTAGACTCAAACGACATCTAGCTGGTGA
TTTAGATGTCAAAATGTGCCCTGAAGTTCCAGCAGATGTTGTTGAGGAGATAAGGGAGCA
TTTGCGGAAGAAACGAGAGAGACGGAGGAAGCGAGCTGCACAAAATGGTGGTGACAATGT
AAAGGCTAAGAACCCTTCTGGTGATGCTAATGTTGAGAAGGATCTTCTACCTTCTAATTC
AGTGCTTCCTGATGGAATGGATACTAATGTTCTTGAAGAAGTCACTAACCAAACGGGTTC
GGTTCACCACGAGACTACTCCCAGGTTTCCGATATTGAGAGCAAGGGATATTGGCTGGGA
GCATGCTGTGGATCTTGATGGAAATAAAAGACGGTGGCAATGCAAGTTCTGTTCTCTATG
TCGAAGTGGTGGTGTAACTACTTTGAAGGCTCATCTCATTGATGACAGCTGCCCAAACGT
TCCAAAGGAAATTTCAAAGAAAGTATCAAACTTCATTGAAGAGAAAAGAGCAACACGCCT
TCTTTTGAATAATTATGTCTTTAATGTTGATGAGGACTTCAACACAATACTTCAAGAAGG
GACTGTAGAATATGTAAATGAACAACAACCTTCAAGAAAGGCTACATATGTGCAAACATT
ATCTAAGTGTGCTATTAATGAGATAGCAGCGGGAAGCAAGCAATGTGGTGCAGAATGTAG
TGGCCAGCCAGTTGAGCATTGTGATCAGCCTGAAGAGCAGTGCACAATGGATTATGGCAG
GATGGATCGATTGACTAGCAATAAGAACCAGATTTTGGACAAGAATACTGAGAATTCAAA
AAATACAAAGATGTTGAAACCATGCCGGAAAAGTGAGTTTAACACAAGGAAGCACATAAT
TATTGTTGATAAAATTGGGAGGCATTGGAAGTGTAGATACTGTGGCATGGATGTGTATGG
TAAAAAGTTTCAGCTCCATTATCATCTAGCTGGTGCATTTCGTCAGGCTAAGTGTCCAAA
TGTTCCTAGAGAAGTTTTTGCAAAAGCAAGACAGCATGTTCTGACAAAGAAAATGCTAAA
AAAGAGTAAAGCTGAGCAACAGATTCCTTCTAGTCCACATATTCTTGCCCAATCTGGTGA
AGAACGGCAGAACAATGATCCATTTTGTGGGAATCAGTCTCAACTGTCAATAAACAATGA
ACCTAGGGAGGTACACAATTACCCTGCAGTGCTAAGGGACAGTGCATGGGAACATTCTCT
GATATATGAGAAAGAAAACGGACACTGGAAGTGCAAGTGGTGCAGTATTGAGGGTGATCA
TGGTTTAACTAGATTGATGTGGCATCTTGTTGGATGGCAGAATCGACCTCAGTGCCCAAA
TATACCAAAGGATGTTGCTGAAAAGATGAAGGATCAAATGATGTCAAAGAAGGAGCAGAA
AGCGAGATCAGGTTTGTTTGACGGCAATGGCTGTTGTGAGGTGTTGTGCTCTTCTAATAG
TTCACAACTTGATCAGAACCATCTCACTGCAAGAATACATGACAGATGTTCTTCCCAGGC
TTTTGACCATGCTAACAGTGAATTAAAAGGATGCAACATGTTATCCAATACTATTCTTTC
ACAACAGAGTTCCAATCCTCAGGTGCATCATGAGGATCCTCAGGTGTGTCATGAGCAAGA
GAGGAAGGAGGTTGCCACCTCTTCAGAACCTGGCTGTGAGCAAGGTCAGAGGATGCAGTG
GCAGTCGCAAAATAAGCCAATGATGGAAGGACCTCATGACAATGGATTATGTGGTGACAC
AAACCAGTTGGAGGAACAAAAAAGTGGCTTTGGAATTAGTGACTGCTGGAGGTACCTGAC
AAAATGGAAATGGATTGTGATAAAACAGTGGATGCGAACACTGCTAAGTGCCAGAATATT
CTTAAGGATGTTTTAAGATCGGAGAACTTTGCTTTGTTGTGCAGTGTACTCTGCAGAACT
GTACATCAAGATGGGGAAAGAACTAGATATTTTGATTTTGGTGTGATTGATTCAAGGATG
AAAAATGGAAATTATGGGCCTGAACCTGAATTATTCGTCCATGATCTGAAACTGTTATGG
GAAGATCTTAAAGTGGCTGGTCAAGATATTGTTCACCTAGCAAATAATCTATCAAGCCTC
ACAGAGGACTCCTATGAAAAGCTGGTTGGAAGAGAGAGAGGATCAGATGATGATGAGCTC
AATGAAGCTGTGGTGGCCAGGTCTGAACCGAAAAACCTAGTTCAACCAAATGCATCGGTA
CCCTTGACCTCACAAGGCTTTAACCAATTATTGGATCAACCCGGGCCTTCTGATCCTTCT
GTTGTATACAAGGACAGTATCTGCAACCGATGTGGGAAAGTAGCAGGAGCTGGTAGCGTT
CTCAAATGTTACAGGTGCATGCTACCTTGCCACATTTCATGCATTGAGGCTACTGGTTCA
CCCATTTCAACTGGAAGGTGGTGTTGTAAAAACTGCAGCGCTGGCACTAAGGAACCAGTT
GAAGGAGACATGGTCTTAGCCCATGGCAATCCAAATTGCTTGCATGAAAGTTGTGTCGTC
TGCGACAGACTTGCGGCCTGCAGGTCTCCAAAATGTGATAACTCAAGAGCATTGGTTATT
TCCAGCGTGGACCCAGAGATTGATACATGTTACTCATGCAAGATATGTGGAGGCACCGAA
GAGGATGAGAAGAGGTTCTTGATATGCGGCAACGTCCTCTGCCGATACATGTACTACCAC
ATTGGGTGCCTCAAGTCCATGCAGATCTCTACCAGTGTAGAGAGGGGCAGCCCGTGCTGG
TACTGCCCGTCTTGCCTTTGCCGAGTTTGTCTGTGTGACAAAGACGACGACCTGACCATT
CTGTGCGATGGTTGCGACGAGGCTTACCATATCTACTGCATAACACCTCGCCATACTTCA
ATACCCAAGGGGCAGTGGTATTGCTCATCGTGCAGCGTGGAGAGGGCAGAAGAGGGGATG
AGACAGTACGAGAGGAGGACGCTGAAGCTCCACCGGAAGGAGGATGCTGGACTACAAAGT
TGGAATTTTGATGGTGTGGACCTGCTGCTATCTGCCGCGGAGCAGCTCAGGATAGATGAG
CAGCTGGAGACTCGTACAGATTAGCGTGTTGCACCTACACTCTGGTCCTTTTGCCGTGCT
AAAGTGAGTTTGTTGTTTGAAGAGCAGAGGCCTGCCTCAGGATCAGAGCTCGGGCAAGGG
CAGTTAACAAAATTTGCTGCAGTCCTCTCACGAACTGATGAAAATACAAGGATCTTCAAA
CAGCATTCGCCTTTTGAGATGCGTGCTATATGATAACATGCTGTAGGATATTTGTTTCGT
TTATCTGTCTTTTTGCTTTGTTGCACTTGCACCTGCTTGAGAAGATACTTAACTCGATAC
ACCTTACTGGTATCCAAACTGCAAGGGATGTTCTTAAATTCAAGGAAAATCTCCAATTTG
AGAG