Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011138_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:8:140115356:140118725:-1 gene:Zm00001d011138 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein IQ-DOMAIN 31
Sequence

ATGGGGAAGTCTCCGGCGAAGTGGATCAAGTCCGTGCTCTTCGGGAAGAAGTCGTCGTCC
AGGTCCGGCTCCACCAAGGCCAAAGATTTATCGAAAGGTGCGAGTAACAAAGGAGCTGCT
GCTGCGGGGAAGGAGCCCGTGTTCTCTGAGAGCTCCCCAGTGATCTCGGAGCCTGTGCTT
GTTAGCGCCCACAACAATGAGACCGTGCGGGAGGTGGCGAAGGGTGAGAATTCCAGCGTG
CAAGAAGTGCCAGTGACCGATGTCAGTCAAGACTTGGAGAAGCAGGGCAGTGTGGGGTCT
GATACGTCCAATGATGCTGAGAGGGTGAAGGAAGAGCGAGCGGCCGTGAAGGCACAAGCT
GCCTTCCGTGGTTATCTGGCACGCCGAGCATTCCGTGCCCTGAAAGGGATCATAAGACTA
CAGGCATTGATTCGGGGTCATCTTGTAAGGAGGCAAGCTGTTTCAACTCTTCGTGCAACA
TGGTTGATTGTGAAGTTTCAAGCCCTGGTCCGTGGGAGGAATCTTAGACTTTCTGAAGCT
TCCATTCAAGCAACCATGGAACTTTCCCAACAGAACCTTGCGGGTGCTAAACCTGGTTCC
TGGAAGGAGAAGTTGTCGTCAAATGCATTTGCTCGCAAGCTTCTATCTTCATCAATTGTG
GTTGAGGCTCTTCACTTCCAGTATGATGAGATGGACCCTAATTCAGCCTTCAATTGGTTA
GAGAGGTGGACGATAAGTCATGTCTGGAAGCCCGCTTCCCAACCAAGGAGAGTTAGTGCT
GATGCTAAGCCACATACAAGGAAGGCCAGCTATGCAATGGAAACAGAGTCAGTGAAATTA
AAGCGTAATGCACGGAGGAGCTCTGCAGGGCCATTTGAACCTTCTCAAACAAACACTGCC
ATTGAAATTGAGAAGACAAGACGGAATCCAAGGAAATTAAGTAGCACTCCTGCTGAGTCA
GTTCCTGATGGCCAGTTAACAGAACTTGAGAAGGTTAAACGTAGCCTTAGGAAGGTTACT
AATTCCGTGGCTGAAACCTCGAAGGCATCTAGTCCAAAAACTGAGATTCCTAACCATCAA
GAGGTCCAATGTGAGAGACCACTAAGAAGAGCAAAACAAGTTCCAATTCATCTTGAGAAT
CAAGAGCCTGATAATGTTAATCTGTCGGACAATGCAAAGATGGATATTCTGGTACCTGAT
ATCCAGCCTGATGTGGAAGTTGCTTCAGATCCAGTCACCATCACTAATGAAGAAAATGTT
GATGAACCACCATCTGTTGTTGCTCCAGTGGCCGAAATTATGCCTCTGCAAGACATCAAC
AACGATGAAAATGCTTTGGTGAATGATGTGGAAGAGAGATCCAAAGAAGAACATCCTTCT
ACTGAGAGCCTGAAAGGCAGCAAGAGGAGGTCTTCATTCTCAGCTAAGCCTGAATATCCA
GAAAATGGC

Peptide Sequence

PEP ID

Zm00001d011138_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:8:140115356:140118725:-1 gene:Zm00001d011138 transcript:Zm00001d011138_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein IQ-DOMAIN 31
Sequence

MGKSPAKWIKSVLFGKKSSSRSGSTKAKDLSKGASNKGAAAAGKEPVFSESSPVISEPVL
VSAHNNETVREVAKGENSSVQEVPVTDVSQDLEKQGSVGSDTSNDAERVKEERAAVKAQA
AFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVSTLRATWLIVKFQALVRGRNLRLSEA
SIQATMELSQQNLAGAKPGSWKEKLSSNAFARKLLSSSIVVEALHFQYDEMDPNSAFNWL
ERWTISHVWKPASQPRRVSADAKPHTRKASYAMETESVKLKRNARRSSAGPFEPSQTNTA
IEIEKTRRNPRKLSSTPAESVPDGQLTELEKVKRSLRKVTNSVAETSKASSPKTEIPNHQ
EVQCERPLRRAKQVPIHLENQEPDNVNLSDNAKMDILVPDIQPDVEVASDPVTITNEENV
DEPPSVVAPVAEIMPLQDINNDENALVNDVEERSKEEHPSTESLKGSKRRSSFSAKPEYP
ENG

Transcript Sequence

Transcript ID

Zm00001d011138_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:140115356:140118725:-1 gene:Zm00001d011138 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein IQ-DOMAIN 31
Sequence

GTCTCTCTCGCTCTCGCCTTCTCGGCGCAGCGCAGTACTACGAGCTAGCAGCACCAGGCA
GGAACCTCTTCCCACACTTCCGCGCTCCTCCCTCTCTCTCTCGAGAATGGTTGTGTAGGC
GGGCGCAGGAGGGAGGGAGGCGAGAGGGGGAGCTAGGGTTTTTCGCCGCCGCCTTCTGTT
ATCCTCAGGCTCTGAACCCCCTCCGGTCCGGTGCGCGGCAGATTAGACTCCGATGGGGAA
GTCTCCGGCGAAGTGGATCAAGTCCGTGCTCTTCGGGAAGAAGTCGTCGTCCAGGTCCGG
CTCCACCAAGGCCAAAGATTTATCGAAAGGTGCGAGTAACAAAGGAGCTGCTGCTGCGGG
GAAGGAGCCCGTGTTCTCTGAGAGCTCCCCAGTGATCTCGGAGCCTGTGCTTGTTAGCGC
CCACAACAATGAGACCGTGCGGGAGGTGGCGAAGGGTGAGAATTCCAGCGTGCAAGAAGT
GCCAGTGACCGATGTCAGTCAAGACTTGGAGAAGCAGGGCAGTGTGGGGTCTGATACGTC
CAATGATGCTGAGAGGGTGAAGGAAGAGCGAGCGGCCGTGAAGGCACAAGCTGCCTTCCG
TGGTTATCTGGCACGCCGAGCATTCCGTGCCCTGAAAGGGATCATAAGACTACAGGCATT
GATTCGGGGTCATCTTGTAAGGAGGCAAGCTGTTTCAACTCTTCGTGCAACATGGTTGAT
TGTGAAGTTTCAAGCCCTGGTCCGTGGGAGGAATCTTAGACTTTCTGAAGCTTCCATTCA
AGCAACCATGGAACTTTCCCAACAGAACCTTGCGGGTGCTAAACCTGGTTCCTGGAAGGA
GAAGTTGTCGTCAAATGCATTTGCTCGCAAGCTTCTATCTTCATCAATTGTGGTTGAGGC
TCTTCACTTCCAGTATGATGAGATGGACCCTAATTCAGCCTTCAATTGGTTAGAGAGGTG
GACGATAAGTCATGTCTGGAAGCCCGCTTCCCAACCAAGGAGAGTTAGTGCTGATGCTAA
GCCACATACAAGGAAGGCCAGCTATGCAATGGAAACAGAGTCAGTGAAATTAAAGCGTAA
TGCACGGAGGAGCTCTGCAGGGCCATTTGAACCTTCTCAAACAAACACTGCCATTGAAAT
TGAGAAGACAAGACGGAATCCAAGGAAATTAAGTAGCACTCCTGCTGAGTCAGTTCCTGA
TGGCCAGTTAACAGAACTTGAGAAGGTTAAACGTAGCCTTAGGAAGGTTACTAATTCCGT
GGCTGAAACCTCGAAGGCATCTAGTCCAAAAACTGAGATTCCTAACCATCAAGAGGTCCA
ATGTGAGAGACCACTAAGAAGAGCAAAACAAGTTCCAATTCATCTTGAGAATCAAGAGCC
TGATAATGTTAATCTGTCGGACAATGCAAAGATGGATATTCTGGTACCTGATATCCAGCC
TGATGTGGAAGTTGCTTCAGATCCAGTCACCATCACTAATGAAGAAAATGTTGATGAACC
ACCATCTGTTGTTGCTCCAGTGGCCGAAATTATGCCTCTGCAAGACATCAACAACGATGA
AAATGCTTTGGTGAATGATGTGGAAGAGAGATCCAAAGAAGAACATCCTTCTACTGAGAG
CCTGAAAGGCAGCAAGAGGAGGTCTTCATTCTCAGCTAAGCCTGAATATCCAGAAAATGG
CT