Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011108_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:8:139153240:139157427:-1 gene:Zm00001d011108 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:variant in methylation102 description: variant in methylation102
Sequence	ATGGGGGGAAACTGGTCTGGGAAGGAGAGTGGTGGCCGTGCCTGCCCTCCCCCCGCCCGG CCAGCGGCAAACCCAAAATTTGAACCCGCCGCTTCGACTGACTACTACCCCACCATCCAA AACCCCACTCCGGCCTCCGCCGTCATTTCCTCTCCCCGCCAATCCGCCACCATTTCCAGT TCCGACCGACCTCGAAACCCTAGCCCCCAGACCATCCCACTCGCAACCGCCATGCCGGAC CTCCCCTGCGACGGCGATGGCGTCTGTATGGTCTGCCGCGTCGCATCCCCGCCGGAGGTC GACCTCCTCACCTGCTCCACCTGCACCACGCCCTGGCACTCTCCGTGCCTCTCCAAGCCC CCCGCCCTCGCCGACGCCGCCAGCTGGAGCTGCCCCGACTGCTCCCCCGACTCCGCTGCC GTCGCCGCTCCCTCGGGCCCCGCCAACACCCTGGTCGCCGCCATCCGCGCCATCGAGGCT GACCACACACTCTCCGACCAGGAGAAGGCGCGCCGCCGCCAGGCCCTCCTCACCGGCGAC GCCCCCGACGGCGCGGACGACGATGACGACGAAGCGTCCGACGATGCCCTTGAGATCGTC GGCAAGAACTTCAGCTGCGTTTTCTGCATGAAGCTCCCTGAACGACCCGTCACGACACCC TGTGGCCATAACTTCTGCTTGAAATGCTTCCAGAAGTGGATTCAAAATCAGAAGAGGACG TGTGGGAAATGTCGGGCGCAGATCCCGGCCAAAATGGCTGAGCAGCCAAGAATCAACTCC GCACTAGTCGAAGTTATCAGGATGGCTAAGATTTCAAAGAATCCTAACTCTGCTGGCTCA GCAGTTCCATATCACTATCTACGAAATGATGATAGGCCTGATAAGGCCTTTACAACTGAC AGGGCTAAGAGGGCTGGAAAAGCAAACGCATCAAGTGGCCAGATCTTTGTGACTATTGCA CCTGATCATTTTGGCCCCATTCTTGCAGAAAATGACCCCCGCAGGAATATGGGTGTTCGA GTCGGGGAAACATGGGAAGACCGACTTGAGTGCAGGCAATGGGGTGCTCACTTTCCTCAT GTGGCTGGCATTGCTGGCCAGTCTACGCATGGTGCTCAATCAGTAGCCCTCTCAGGAGGG TATGAAGATGATGAAGACCATGGAGAGTGGTTTCTTTACACCGGAAGCGGTGGGAGGGAT CTAAGTGGTAACAAGCGGACAAACAAGGAACAGTCATCTGATCAGAAATTTGAGAAGCTG AATGCTGCTTTACGCATTATCGTCTATATATGCTTCGTGTCCTCCAATTGCTGGACCTTT GTCTCACTATATTGTCTTAAAAGGTCGCACAAAGAGAAGCGGTCCTCATATGCTCCTGAA TCTGGTGTGAGGTACGACGGGGTTTACAGGATTGAGAAGTGCTGGAGGAAGATTGGTATT CAGGGTAAGTTCAAGGTCTGCAGGTATCTCTTTGTACGCTGTGACAATGAACCAGCTCCT TGGACCAGTGACGATCACGGTGACCGTCCAAGACCATTGCCAAAGATAAAGGAGCTGCAA GGTGCAACTGATATAACAGAGAGGAAAGGGCGCCCTTCATGGGATTATGATGATAAAGAT GGCTGGAAATGGGTGGTGCCTCCGCCAGTCAGCAGGAAGCCTGTTCTATCTGGGGATCCT GAGACCGACAAGCAAATCCGTAGAGCAACAAAGCGTGTTCATTTGTCTGTTGCTGAAAGG CTGCTTAAAGAATTTGCTTGTTCGATATGCCGGGCGGTGATTAAAGAACCACTTACGACT CCATGTGCCCACAACTTTTGCAAGACTTGTTTGCTTGGGGCATATGATAGCCAGTCTTCT ATAAGGGAAAGAAGCCGTGGTGGTCGGACTCTAAGGGCACAGAAGATTGTGAAGACGTGC CCTTCTTGCCCAACTGACATCTGTGATTTTTTAGAGAATCCCCAGATCAACCGAGAAATG ATGGAGCTGATTGAGACTTTGCAACGCAAGGCTGTTGAAGAAGCCAAGATGACTTCAGAT GATGCTGAGGAATGTGGTGATGGTGATTCGGAGGAAAATGATGGTGATTTGGTGAAGGGA GAGGATGTTAGTGGTTTGAATGAGGGAGAGCAAGACAGTGCAGACGCTGATGCTAATGTT GAAGGTTCTGTGAAGATTGTGGTTGAAATCAAGGAGGAAGGAAAAGATGATAAAAGGTCA AAGATGGGCGCGACTGAAGTGGTGGATGTGTTAGTTGATGAAGATGCTGTGAAGCAGACG AAAAAGCGCAAGGTTGATGCTGAGGCTGGCACCAACGGTGGCAAGAGGATGAAGAGCAGT AGTACCGTGGAAGAGGTTGCTGTGTGCGTCACTCCTGTGAAACGGAGCAGGAAGAGTGGT GATATGGATGATGAGCGCAACGGCAGTCCTGCTGTGAGCAGCGGCCGCAGGGTGACTCGC AGCAGTGTGGATGACACTGGATCTGCTGATAGTCCGGCGAGGAGGACTAGAAGCCGTGCC AGAGCTGATGCTGGTTGCTGA

Peptide Sequence

PEP ID	Zm00001d011108_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:8:139153240:139157427:-1 gene:Zm00001d011108 transcript:Zm00001d011108_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:variant in methylation102 description: variant in methylation102
Sequence	MGGNWSGKESGGRACPPPARPAANPKFEPAASTDYYPTIQNPTPASAVISSPRQSATISS SDRPRNPSPQTIPLATAMPDLPCDGDGVCMVCRVASPPEVDLLTCSTCTTPWHSPCLSKP PALADAASWSCPDCSPDSAAVAAPSGPANTLVAAIRAIEADHTLSDQEKARRRQALLTGD APDGADDDDDEASDDALEIVGKNFSCVFCMKLPERPVTTPCGHNFCLKCFQKWIQNQKRT CGKCRAQIPAKMAEQPRINSALVEVIRMAKISKNPNSAGSAVPYHYLRNDDRPDKAFTTD RAKRAGKANASSGQIFVTIAPDHFGPILAENDPRRNMGVRVGETWEDRLECRQWGAHFPH VAGIAGQSTHGAQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKL NAALRIIVYICFVSSNCWTFVSLYCLKRSHKEKRSSYAPESGVRYDGVYRIEKCWRKIGI QGKFKVCRYLFVRCDNEPAPWTSDDHGDRPRPLPKIKELQGATDITERKGRPSWDYDDKD GWKWVVPPPVSRKPVLSGDPETDKQIRRATKRVHLSVAERLLKEFACSICRAVIKEPLTT PCAHNFCKTCLLGAYDSQSSIRERSRGGRTLRAQKIVKTCPSCPTDICDFLENPQINREM MELIETLQRKAVEEAKMTSDDAEECGDGDSEENDGDLVKGEDVSGLNEGEQDSADADANV EGSVKIVVEIKEEGKDDKRSKMGATEVVDVLVDEDAVKQTKKRKVDAEAGTNGGKRMKSS STVEEVAVCVTPVKRSRKSGDMDDERNGSPAVSSGRRVTRSSVDDTGSADSPARRTRSRA RADAGC

Transcript Sequence

Transcript ID	Zm00001d011108_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:139153240:139157427:-1 gene:Zm00001d011108 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:variant in methylation102 description: variant in methylation102
Sequence	GGCGAAAGTGGCGCCATGGGGGGAAACTGGTCTGGGAAGGAGAGTGGTGGCCGTGCCTGC CCTCCCCCCGCCCGGCCAGCGGCAAACCCAAAATTTGAACCCGCCGCTTCGACTGACTAC TACCCCACCATCCAAAACCCCACTCCGGCCTCCGCCGTCATTTCCTCTCCCCGCCAATCC GCCACCATTTCCAGTTCCGACCGACCTCGAAACCCTAGCCCCCAGACCATCCCACTCGCA ACCGCCATGCCGGACCTCCCCTGCGACGGCGATGGCGTCTGTATGGTCTGCCGCGTCGCA TCCCCGCCGGAGGTCGACCTCCTCACCTGCTCCACCTGCACCACGCCCTGGCACTCTCCG TGCCTCTCCAAGCCCCCCGCCCTCGCCGACGCCGCCAGCTGGAGCTGCCCCGACTGCTCC CCCGACTCCGCTGCCGTCGCCGCTCCCTCGGGCCCCGCCAACACCCTGGTCGCCGCCATC CGCGCCATCGAGGCTGACCACACACTCTCCGACCAGGAGAAGGCGCGCCGCCGCCAGGCC CTCCTCACCGGCGACGCCCCCGACGGCGCGGACGACGATGACGACGAAGCGTCCGACGAT GCCCTTGAGATCGTCGGCAAGAACTTCAGCTGCGTTTTCTGCATGAAGCTCCCTGAACGA CCCGTCACGACACCCTGTGGCCATAACTTCTGCTTGAAATGCTTCCAGAAGTGGATTCAA AATCAGAAGAGGACGTGTGGGAAATGTCGGGCGCAGATCCCGGCCAAAATGGCTGAGCAG CCAAGAATCAACTCCGCACTAGTCGAAGTTATCAGGATGGCTAAGATTTCAAAGAATCCT AACTCTGCTGGCTCAGCAGTTCCATATCACTATCTACGAAATGATGATAGGCCTGATAAG GCCTTTACAACTGACAGGGCTAAGAGGGCTGGAAAAGCAAACGCATCAAGTGGCCAGATC TTTGTGACTATTGCACCTGATCATTTTGGCCCCATTCTTGCAGAAAATGACCCCCGCAGG AATATGGGTGTTCGAGTCGGGGAAACATGGGAAGACCGACTTGAGTGCAGGCAATGGGGT GCTCACTTTCCTCATGTGGCTGGCATTGCTGGCCAGTCTACGCATGGTGCTCAATCAGTA GCCCTCTCAGGAGGGTATGAAGATGATGAAGACCATGGAGAGTGGTTTCTTTACACCGGA AGCGGTGGGAGGGATCTAAGTGGTAACAAGCGGACAAACAAGGAACAGTCATCTGATCAG AAATTTGAGAAGCTGAATGCTGCTTTACGCATTATCGTCTATATATGCTTCGTGTCCTCC AATTGCTGGACCTTTGTCTCACTATATTGTCTTAAAAGGTCGCACAAAGAGAAGCGGTCC TCATATGCTCCTGAATCTGGTGTGAGGTACGACGGGGTTTACAGGATTGAGAAGTGCTGG AGGAAGATTGGTATTCAGGGTAAGTTCAAGGTCTGCAGGTATCTCTTTGTACGCTGTGAC AATGAACCAGCTCCTTGGACCAGTGACGATCACGGTGACCGTCCAAGACCATTGCCAAAG ATAAAGGAGCTGCAAGGTGCAACTGATATAACAGAGAGGAAAGGGCGCCCTTCATGGGAT TATGATGATAAAGATGGCTGGAAATGGGTGGTGCCTCCGCCAGTCAGCAGGAAGCCTGTT CTATCTGGGGATCCTGAGACCGACAAGCAAATCCGTAGAGCAACAAAGCGTGTTCATTTG TCTGTTGCTGAAAGGCTGCTTAAAGAATTTGCTTGTTCGATATGCCGGGCGGTGATTAAA GAACCACTTACGACTCCATGTGCCCACAACTTTTGCAAGACTTGTTTGCTTGGGGCATAT GATAGCCAGTCTTCTATAAGGGAAAGAAGCCGTGGTGGTCGGACTCTAAGGGCACAGAAG ATTGTGAAGACGTGCCCTTCTTGCCCAACTGACATCTGTGATTTTTTAGAGAATCCCCAG ATCAACCGAGAAATGATGGAGCTGATTGAGACTTTGCAACGCAAGGCTGTTGAAGAAGCC AAGATGACTTCAGATGATGCTGAGGAATGTGGTGATGGTGATTCGGAGGAAAATGATGGT GATTTGGTGAAGGGAGAGGATGTTAGTGGTTTGAATGAGGGAGAGCAAGACAGTGCAGAC GCTGATGCTAATGTTGAAGGTTCTGTGAAGATTGTGGTTGAAATCAAGGAGGAAGGAAAA GATGATAAAAGGTCAAAGATGGGCGCGACTGAAGTGGTGGATGTGTTAGTTGATGAAGAT GCTGTGAAGCAGACGAAAAAGCGCAAGGTTGATGCTGAGGCTGGCACCAACGGTGGCAAG AGGATGAAGAGCAGTAGTACCGTGGAAGAGGTTGCTGTGTGCGTCACTCCTGTGAAACGG AGCAGGAAGAGTGGTGATATGGATGATGAGCGCAACGGCAGTCCTGCTGTGAGCAGCGGC CGCAGGGTGACTCGCAGCAGTGTGGATGACACTGGATCTGCTGATAGTCCGGCGAGGAGG ACTAGAAGCCGTGCCAGAGCTGATGCTGGTTGCTGAAGGGGTAGAGGAAGCGGGGAGGCG GCAGAACCGCAGAAGCCAGCCGTGTCTTTTTTGGGTGGTTGTACGTACATATACTGGGAG CCTTGCCTTATATTTTGGTTGAGGGGTGCAAGTCAGATACTGTTTGCTGTGCACACCTGT TTCTTTTGGTTTGGGAGACCGATTGCTGCTTCCTGGATGCTAAGCGTTCATCCAAGACCC TTAAAACATTTTATTCCCGGTTCCTATTTGAATTGAATTTCTGCC