Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011101_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:139029176:139032177:1 gene:Zm00001d011101 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF1664 domain family protein

Sequence

ATGGTGCTCGGCAGTGTCTTCATCGTCCTCGGCTCCGGCGTCGCTGGATCCCTTCTCACC
GGTGACACCAAACTTCCGAAACTGGGGGATGTATTCTCTGGAGCCGCCAAGTTTGTGAAG
AAACATGAAGGCGGTGCCGCAAAGTCTGGGTCTGGCAGCAGCGATAATCAGAATACTTCT
CAGCAGTTGCTATCTCAGATCAACTATATCAGGGAAGAGCTACACACCCTACAGGCCTCA
ACACCAACTACAGTAGTGACATCGGCTGTGAAATCTGGTTCTGGACCATATGCTATAACA
GCAGTTGTTGTTGCTGGGGCTATCGGCTACGCTTATATAAAGTGGAAGGGATGGAATCTC
TCTGATATGATGTTTGTGACAAGGCGTGGTTTATCTGAAGCTTGCTCTGCTGTTGGCAGC
CATTTGGATAAAGTTTCAGACTCTGTTGTCGTGACAAGGAAACATCTGGCTGGGAGGATT
GCCCGTGTGGATATTAGTTTAGATGAAACCCAGCAGATTATCGAGGGCACAAGGGATGAG
GTCGGAATCATACATGGAGATCTAAGTGCTTTCCAGGAGGACTTGCAATCAGTAAATCTT
GTAGTTCGAACTCTGGAATCCAAGATGGGACGTCTTGAATGCTCTCAGGATCAAATGGTA
GACGGAATAAATCACTTGTGTGAGTTCACCCGGAAGCTGGAATATAGCCAGACGAAGGCC
AATATCTCGTCGCCATCCGTTCCTGCAGTCATGGATTCCTCCTATTCAGAGCGAATTGTA
GAGAAGGCTACTAGCTGTTTGCCAAGACTAGCTCTGGAGGCGCCAAACTCACCTGTAGTG
CCTAGACCAGAAGAGACATCCCTGCTGCAGGTGGCCGAACAGCCTAAAGCTCTGAAGGAG
CAGGAGAAGGAGAACGAGGAAGGTGCTAGCCAAACATGTCAAGCATCATCATCGTCGACT
AAAGCAGCAGCAGCAGCAGCAGCTAGCACAAACACACGACGGAAAGCAAGCTCCAGCCGA
TTGGGGGCCCTCTGGATGCCTGTGATCGGCACTTTGCTCAGGGCTTCTGCTATAAATTAG

Peptide Sequence

PEP ID

Zm00001d011101_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:139029176:139032177:1 gene:Zm00001d011101 transcript:Zm00001d011101_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF1664 domain family protein

Sequence

MVLGSVFIVLGSGVAGSLLTGDTKLPKLGDVFSGAAKFVKKHEGGAAKSGSGSSDNQNTS
QQLLSQINYIREELHTLQASTPTTVVTSAVKSGSGPYAITAVVVAGAIGYAYIKWKGWNL
SDMMFVTRRGLSEACSAVGSHLDKVSDSVVVTRKHLAGRIARVDISLDETQQIIEGTRDE
VGIIHGDLSAFQEDLQSVNLVVRTLESKMGRLECSQDQMVDGINHLCEFTRKLEYSQTKA
NISSPSVPAVMDSSYSERIVEKATSCLPRLALEAPNSPVVPRPEETSLLQVAEQPKALKE
QEKENEEGASQTCQASSSSTKAAAAAAASTNTRRKASSSRLGALWMPVIGTLLRASAIN

Transcript Sequence

Transcript ID

Zm00001d011101_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:139029176:139032177:1 gene:Zm00001d011101 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF1664 domain family protein

Sequence

GTCGGCGAACATTGAGCCATAGTAATAGATCGCCTTCTCCGCCGCCGCCGCCGTAAGTAG
TTCGATCGACGTCGCGGCGGTTCACGTTCCGTTCCCACGTAACGTAGCCATGGTGCTCGG
CAGTGTCTTCATCGTCCTCGGCTCCGGCGTCGCTGGATCCCTTCTCACCGGTGACACCAA
ACTTCCGAAACTGGGGGATGTATTCTCTGGAGCCGCCAAGTTTGTGAAGAAACATGAAGG
CGGTGCCGCAAAGTCTGGGTCTGGCAGCAGCGATAATCAGAATACTTCTCAGCAGTTGCT
ATCTCAGATCAACTATATCAGGGAAGAGCTACACACCCTACAGGCCTCAACACCAACTAC
AGTAGTGACATCGGCTGTGAAATCTGGTTCTGGACCATATGCTATAACAGCAGTTGTTGT
TGCTGGGGCTATCGGCTACGCTTATATAAAGTGGAAGGGATGGAATCTCTCTGATATGAT
GTTTGTGACAAGGCGTGGTTTATCTGAAGCTTGCTCTGCTGTTGGCAGCCATTTGGATAA
AGTTTCAGACTCTGTTGTCGTGACAAGGAAACATCTGGCTGGGAGGATTGCCCGTGTGGA
TATTAGTTTAGATGAAACCCAGCAGATTATCGAGGGCACAAGGGATGAGGTCGGAATCAT
ACATGGAGATCTAAGTGCTTTCCAGGAGGACTTGCAATCAGTAAATCTTGTAGTTCGAAC
TCTGGAATCCAAGATGGGACGTCTTGAATGCTCTCAGGATCAAATGGTAGACGGAATAAA
TCACTTGTGTGAGTTCACCCGGAAGCTGGAATATAGCCAGACGAAGGCCAATATCTCGTC
GCCATCCGTTCCTGCAGTCATGGATTCCTCCTATTCAGAGCGAATTGTAGAGAAGGCTAC
TAGCTGTTTGCCAAGACTAGCTCTGGAGGCGCCAAACTCACCTGTAGTGCCTAGACCAGA
AGAGACATCCCTGCTGCAGGTGGCCGAACAGCCTAAAGCTCTGAAGGAGCAGGAGAAGGA
GAACGAGGAAGGTGCTAGCCAAACATGTCAAGCATCATCATCGTCGACTAAAGCAGCAGC
AGCAGCAGCAGCTAGCACAAACACACGACGGAAAGCAAGCTCCAGCCGATTGGGGGCCCT
CTGGATGCCTGTGATCGGCACTTTGCTCAGGGCTTCTGCTATAAATTAGCTTGGCTGAGC
CATGGTGGCAATTTTGTAGGTCCTGCTAGAATTGGCAACGCAGTGCCACCAGATAGCTCG
AAAAACGATCAAAACTATCTAGATAGGGTGAAGGTTATCTGCATTGGCAGCGAATTAAGA
TTTGCATTGCCATCTTACTTGTCTTAAGGGCTTTAGAAACTAGAGACAGCTCTAATTATA
GTCACTTATATGACTCACGTTCTCCCAG