Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d011061_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:8:137871232:137875616:-1 gene:Zm00001d011061 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase 5
Sequence	ATGCCGCCGCCGCCACCGTCGGCCCCGGCCTCGCACCACCTGCGCCTGTGGTGGAGGCGC CGGGGCCGGGCCGGCGCGGTCGGGGCCACCTTCGCCGTCGCGCTGCTCGCGACCGCTTTG CTCCTCGCGCTCTCCAGCTACGCCTCCATAGTATTCCCTGCGTCCAGTGGCCGCCGCGGC CCCGCCCTCGTCGGACTCACCCTCGTCCGCCGCGCCAGCGAGAAGGGCGCGCTGTGCTTG GATGGGAGCGCGCCCGGGTACCATCTGCAGGGAGGGTCTGGGAGTGGATCGCGGAGCTGG CTAATCCACTTGGAGGGTGGAGGCTGGTGTCGTAATCTCAAATCATGTGCCTCACGTCAG AGATCAATGTTGGGATCATCCCGGTACATGGAAGGCCAGGTTGAGTTTACAGGGATCTTG AGCGATGACAAATCTCAGAATCCCGATTTTTACAATTGGAATAAAGTGAAGATAAGATAT TGCGACGGGGCATCATTCTCTGGGGATGTAAAAGATGAATTGCAGAATGGTACACGATTC TTCTTCAGAGGCCAGCGTATCTGGGAAGCAGTTATGAACGAACTTGTAGTTAAGGGGCTC AGGAATGCTAAACAGGCTTTCCTAACAGGATGCTCTGCTGGTGGACTAGCCACTTACATT CACTGTGATTCTTTTCGTGCGCTACTACCAAAGGATTCTAGGGTTAAGTGTCTCGCGGAT GGTGGTTTTTTCCTTGATGTAGAAGACATTTCTGGGAGGAGGACAATGCACTCTTTCTAC AGTGATATTGTGCGCCTTCAGGGTCTAAGGGAAAGGTTTTCGCATTGTAACTCAAACATG GACGCAGGCCAGTGTTTCTTTCCACGTGAAGTTGTGAAGCACATTGTCAACCCAGTTTTC GTTCTTAATCCAGCATATGATGCCTGGCAGGTACAACATGCGTTGGCTCCAGAAGCATCT GACCCTCAACATTCATGGCTGGACTGCAGATTGGATATTAGCAAGTGCAGCCCTAAACAA CTTGGAATTCTCCAAGGTTTCAGGAAAGAACTGCATGACGCTATAAGTGAAGCTAAGCAG AAAAGGGGCTGGGGATTTTATATCAACTCGTGCTTTGTTCATTGTCAGTCGCTGAACTCG TTGACTTGGCACTCTCCAACTTCCCCCAGAGTCAACAATAAGAGCATTGCAGAAGCAGTT GGAGACTGGTTCTTTGACAGAAGAGAGGTGAAGGAGATAGATTGCGAATACCCCTGCAAC CCGACGTGCCACAACTTGGTCTTCGCAAGGCCTTTCAAGATATGA

Peptide Sequence

PEP ID	Zm00001d011061_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:8:137871232:137875616:-1 gene:Zm00001d011061 transcript:Zm00001d011061_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase 5
Sequence	MPPPPPSAPASHHLRLWWRRRGRAGAVGATFAVALLATALLLALSSYASIVFPASSGRRG PALVGLTLVRRASEKGALCLDGSAPGYHLQGGSGSGSRSWLIHLEGGGWCRNLKSCASRQ RSMLGSSRYMEGQVEFTGILSDDKSQNPDFYNWNKVKIRYCDGASFSGDVKDELQNGTRF FFRGQRIWEAVMNELVVKGLRNAKQAFLTGCSAGGLATYIHCDSFRALLPKDSRVKCLAD GGFFLDVEDISGRRTMHSFYSDIVRLQGLRERFSHCNSNMDAGQCFFPREVVKHIVNPVF VLNPAYDAWQVQHALAPEASDPQHSWLDCRLDISKCSPKQLGILQGFRKELHDAISEAKQ KRGWGFYINSCFVHCQSLNSLTWHSPTSPRVNNKSIAEAVGDWFFDRREVKEIDCEYPCN PTCHNLVFARPFKI

Transcript Sequence

Transcript ID	Zm00001d011061_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:137871232:137875616:-1 gene:Zm00001d011061 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase 5
Sequence	AACCGCAGGGGGCACAGCACGACACGAGCACTCTGCACTCCACTACCGCGGTACCGCCTG CCTGCAGGCTGCAGCCCAGCCGTCCGCAGTCCGCATCAGATCCTGCGCTGCCCTGCCCTG CCCTGCCCCGACCATGCCGCCGCCGCCACCGTCGGCCCCGGCCTCGCACCACCTGCGCCT GTGGTGGAGGCGCCGGGGCCGGGCCGGCGCGGTCGGGGCCACCTTCGCCGTCGCGCTGCT CGCGACCGCTTTGCTCCTCGCGCTCTCCAGCTACGCCTCCATAGTATTCCCTGCGTCCAG TGGCCGCCGCGGCCCCGCCCTCGTCGGACTCACCCTCGTCCGCCGCGCCAGCGAGAAGGG CGCGCTGTGCTTGGATGGGAGCGCGCCCGGGTACCATCTGCAGGGAGGGTCTGGGAGTGG ATCGCGGAGCTGGCTAATCCACTTGGAGGGTGGAGGCTGGTGTCGTAATCTCAAATCATG TGCCTCACGTCAGAGATCAATGTTGGGATCATCCCGGTACATGGAAGGCCAGGTTGAGTT TACAGGGATCTTGAGCGATGACAAATCTCAGAATCCCGATTTTTACAATTGGAATAAAGT GAAGATAAGATATTGCGACGGGGCATCATTCTCTGGGGATGTAAAAGATGAATTGCAGAA TGGTACACGATTCTTCTTCAGAGGCCAGCGTATCTGGGAAGCAGTTATGAACGAACTTGT AGTTAAGGGGCTCAGGAATGCTAAACAGGCTTTCCTAACAGGATGCTCTGCTGGTGGACT AGCCACTTACATTCACTGTGATTCTTTTCGTGCGCTACTACCAAAGGATTCTAGGGTTAA GTGTCTCGCGGATGGTGGTTTTTTCCTTGATGTAGAAGACATTTCTGGGAGGAGGACAAT GCACTCTTTCTACAGTGATATTGTGCGCCTTCAGGGTCTAAGGGAAAGGTTTTCGCATTG TAACTCAAACATGGACGCAGGCCAGTGTTTCTTTCCACGTGAAGTTGTGAAGCACATTGT CAACCCAGTTTTCGTTCTTAATCCAGCATATGATGCCTGGCAGGTACAACATGCGTTGGC TCCAGAAGCATCTGACCCTCAACATTCATGGCTGGACTGCAGATTGGATATTAGCAAGTG CAGCCCTAAACAACTTGGAATTCTCCAAGGTTTCAGGAAAGAACTGCATGACGCTATAAG TGAAGCTAAGCAGAAAAGGGGCTGGGGATTTTATATCAACTCGTGCTTTGTTCATTGTCA GTCGCTGAACTCGTTGACTTGGCACTCTCCAACTTCCCCCAGAGTCAACAATAAGAGCAT TGCAGAAGCAGTTGGAGACTGGTTCTTTGACAGAAGAGAGGTGAAGGAGATAGATTGCGA ATACCCCTGCAACCCGACGTGCCACAACTTGGTCTTCGCAAGGCCTTTCAAGATATGAAA TTTTATCTCTCTTCTTCCGCTATGATTTTGTTGTAAAATCAGAAAAAAAATATAAACTTG TTATTATAAATCATTTTACCCGATTGGTGGAGTCGACGGAGAAGCTTGAG