Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011012_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:136696793:136698348:-1 gene:Zm00001d011012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

ATGGTGACGGAAGGGTCCGACGAGTGGGCGGTCTACGGCGGGACTGGAGCGTTTGCGATG
GCCACCGGCGTCATCAGAAGGAAGAACCTTCTTGCCGGCGGCGGTGACAGTGGCGGGAAC
TCCGACGAGCTTAGCGTGGAAGTGTTCTGCCCGGTGTTCGGATCACCGCAGCAGCCGCCA
AAGGACGACGACGATGGCTCCGCCGTCACCAAGATTGGACTATGGGGTGGGCCGGGAGGA
TCGGCACAGGACATCACGACGACAGAGGCACCAAGGCGTCTGAACAGCGTCACCATTCGC
GCCGGTATTGCCGTCGACTCGATTGAGTTCACTTACACTGGCAAGGACAGGCAGAGGCGC
ACAGCTGGGCGATGGGGTGGACTTGGCGGCAATGTTCGAACGATCGATCTTGGCGACAAC
GAACACATCAGGGAGGTGTCAGGAACGTACGGCACATTTGAAGGTGCTACTACCCTAACC
TCGCTCAGGTTCATCACCAGCACCAGAGCCTGGGGCCCATGGGGCACCGAGAACGGGACA
CGCTTCTGCATCACCGCGCCCATCGGCAGCAGCGTCGTGGGATTCTACGGACGCGCGGGA
ACCAGGCTCGTCGACGCTATCGGTGTCTACCTGCGTCAACTTTGA

Peptide Sequence

PEP ID

Zm00001d011012_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:136696793:136698348:-1 gene:Zm00001d011012 transcript:Zm00001d011012_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

MVTEGSDEWAVYGGTGAFAMATGVIRRKNLLAGGGDSGGNSDELSVEVFCPVFGSPQQPP
KDDDDGSAVTKIGLWGGPGGSAQDITTTEAPRRLNSVTIRAGIAVDSIEFTYTGKDRQRR
TAGRWGGLGGNVRTIDLGDNEHIREVSGTYGTFEGATTLTSLRFITSTRAWGPWGTENGT
RFCITAPIGSSVVGFYGRAGTRLVDAIGVYLRQL

Transcript Sequence

Transcript ID

Zm00001d011012_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:136696793:136698348:-1 gene:Zm00001d011012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

GCACACAGCAGCAGCAGCCCTTCTTTTTGGAGCAGCACCACAGGGGAGATCGATCAATCA
ATCAGCAAGCAAAGCGCGCACGGCACAGGTGGGTAGCTAGCAATGGCGACGCCGCCGAAC
CCTCCTCCTCCGAGCACTCCCATAGCTGCGGCGGCGCCCTTATTGCCAGCAGAGTTCACC
AGATTCACCTTCCGGGCCTTGTACGTCCGCCGGACCGGCCCAAGCAGCAGGGAGATGATT
CAGCCGGGGAGACCTTACGATGAGCTGGGCAGAAGACTCACCAGTGACTACCCGGTGTAC
GATGGCCGTGGCTCCGACGCCGCCCTTGTCGCTCGCATGCAGGGGATCACCGTCCTCGTC
GGTAACGCGCACCAGCTGTTCACCATCGTGTTCGAGACCGGGAGGTACGGTTCAAGGGCT
CCACGCTCCTCACCAACGGGATGGTGACGGAAGGGTCCGACGAGTGGGCGGTCTACGGCG
GGACTGGAGCGTTTGCGATGGCCACCGGCGTCATCAGAAGGAAGAACCTTCTTGCCGGCG
GCGGTGACAGTGGCGGGAACTCCGACGAGCTTAGCGTGGAAGTGTTCTGCCCGGTGTTCG
GATCACCGCAGCAGCCGCCAAAGGACGACGACGATGGCTCCGCCGTCACCAAGATTGGAC
TATGGGGTGGGCCGGGAGGATCGGCACAGGACATCACGACGACAGAGGCACCAAGGCGTC
TGAACAGCGTCACCATTCGCGCCGGTATTGCCGTCGACTCGATTGAGTTCACTTACACTG
GCAAGGACAGGCAGAGGCGCACAGCTGGGCGATGGGGTGGACTTGGCGGCAATGTTCGAA
CGATCGATCTTGGCGACAACGAACACATCAGGGAGGTGTCAGGAACGTACGGCACATTTG
AAGGTGCTACTACCCTAACCTCGCTCAGGTTCATCACCAGCACCAGAGCCTGGGGCCCAT
GGGGCACCGAGAACGGGACACGCTTCTGCATCACCGCGCCCATCGGCAGCAGCGTCGTGG
GATTCTACGGACGCGCGGGAACCAGGCTCGTCGACGCTATCGGTGTCTACCTGCGTCAAC
TTTGATTTCAACGGCATGATGCTTGATTTCAAATAGATATATTAATTAGTTCCTCGTCAC
AGTCGATCCTGTGTCAAATAATAAAGAAGCTCTTGTATGCATGTGTATATGTTAGTCCTT
CGTTCTGTATGTGTCAAATAAAGGTTGAT