Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011004_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:8:136501289:136503874:-1 gene:Zm00001d011004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor RS2Z32
Sequence

ATGCCTCGCAATGATGATCGCTATGGGAATACACGCTTGTATGTTGGAAGATTGTCTCCC
CGCACCCGTTCTCGTGACCTAGAATACCTTTTCAGCAAATATGGGAGAATTCGAGAAGTG
GAGTTGAAGCGTGACTATGCATTCATTGAATTCAGTGACCCCCGTGATGCTGATGATGCA
CAGTACAACCTAGATGGCAGGGACGTCGATGGAAGCCGCATTATTGTTGAATTTGCTAAA
GGGGTTCCTCGTGGTTCTGGTGGTTCACGTGATTACAACGGAAGAGGACCTCCACCAGGA
ACAGGCCGTTGTTTTAACTGTGGAGTTGATGGTCACTGGGCAAGAGACTGTCAGGCTGGT
GACTGGAAGAACAAATGCTACCGTTGTGGCGAAAGGGGCCATATAGAAAGAAATTGCCAG
AACAGTCCAAGGAACCTCAGGCGTGAGAGAAGCTATTCACGGTCTCCATCCCCACGCCGA
GGACGGGGCCGCAGCCGGAGCTACAGCAGAAGCCGGAGCTATAGCCGATCCAGATCCCCG
TCTGGATCTCCTAGGGGTGGACGCCGAGACCGTGATGAGAGGAGATCAAGGAGTCTTAGC
TACAGCAGGAGCGCAAGCCCTAGGCGTTCTGTGTCACCTGTAAAGGAAAAGGAGCGCAGC
CGCACACCTGATGGCAGTAGGAGCCCCAGCCCAAGGGACAAGGTGAGCCCACCACCAAAG
GATAATGGTGCCCACAATGGCTCGGACCGTGAAGACAGCCCTGGGGGCAGGGAGATGAGC
AAGAGGAGTCGGAGCCCGTCTGATGGCTACCGTAGCCCTGTGGGCAATGGGCGCAGCCCG
AGCCGGGCAACAATGGTGACGACCCAAGCCCCAAGGGCAACAATGGTGATGACGAGCACC
GCGGTTCACCAAGAGGAAGTCAGTCCCCCTGAACTGAAAAACTCCCCGTGCAATTTGGGG
AGCAGTGTGCCTGATTTGAGAAAACAAACTGTATTTTGCCATTTCTCAGACTTGTGA

Peptide Sequence

PEP ID

Zm00001d011004_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:8:136501289:136503874:-1 gene:Zm00001d011004 transcript:Zm00001d011004_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor RS2Z32
Sequence

MPRNDDRYGNTRLYVGRLSPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDA
QYNLDGRDVDGSRIIVEFAKGVPRGSGGSRDYNGRGPPPGTGRCFNCGVDGHWARDCQAG
DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGRSRSYSRSRSYSRSRSP
SGSPRGGRRDRDERRSRSLSYSRSASPRRSVSPVKEKERSRTPDGSRSPSPRDKVSPPPK
DNGAHNGSDREDSPGGREMSKRSRSPSDGYRSPVGNGRSPSRATMVTTQAPRATMVMTST
AVHQEEVSPPELKNSPCNLGSSVPDLRKQTVFCHFSDL

Transcript Sequence

Transcript ID

Zm00001d011004_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:136501289:136503874:-1 gene:Zm00001d011004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor RS2Z32
Sequence

GCTTCTCACGTGTTCAGGAGATATGCCTCGCAATGATGATCGCTATGGGAATACACGCTT
GTATGTTGGAAGATTGTCTCCCCGCACCCGTTCTCGTGACCTAGAATACCTTTTCAGCAA
ATATGGGAGAATTCGAGAAGTGGAGTTGAAGCGTGACTATGCATTCATTGAATTCAGTGA
CCCCCGTGATGCTGATGATGCACAGTACAACCTAGATGGCAGGGACGTCGATGGAAGCCG
CATTATTGTTGAATTTGCTAAAGGGGTTCCTCGTGGTTCTGGTGGTTCACGTGATTACAA
CGGAAGAGGACCTCCACCAGGAACAGGCCGTTGTTTTAACTGTGGAGTTGATGGTCACTG
GGCAAGAGACTGTCAGGCTGGTGACTGGAAGAACAAATGCTACCGTTGTGGCGAAAGGGG
CCATATAGAAAGAAATTGCCAGAACAGTCCAAGGAACCTCAGGCGTGAGAGAAGCTATTC
ACGGTCTCCATCCCCACGCCGAGGACGGGGCCGCAGCCGGAGCTACAGCAGAAGCCGGAG
CTATAGCCGATCCAGATCCCCGTCTGGATCTCCTAGGGGTGGACGCCGAGACCGTGATGA
GAGGAGATCAAGGAGTCTTAGCTACAGCAGGAGCGCAAGCCCTAGGCGTTCTGTGTCACC
TGTAAAGGAAAAGGAGCGCAGCCGCACACCTGATGGCAGTAGGAGCCCCAGCCCAAGGGA
CAAGGTGAGCCCACCACCAAAGGATAATGGTGCCCACAATGGCTCGGACCGTGAAGACAG
CCCTGGGGGCAGGGAGATGAGCAAGAGGAGTCGGAGCCCGTCTGATGGCTACCGTAGCCC
TGTGGGCAATGGGCGCAGCCCGAGCCGGGCAACAATGGTGACGACCCAAGCCCCAAGGGC
AACAATGGTGATGACGAGCACCGCGGTTCACCAAGAGGAAGTCAGTCCCCCTGAACTGAA
AAACTCCCCGTGCAATTTGGGGAGCAGTGTGCCTGATTTGAGAAAACAAACTGTATTTTG
CCATTTCTCAGACTTGTGATCTTTTTGAGCAAGAAAAC