Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d011001_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:136349224:136350587:1 gene:Zm00001d011001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ALUMINUM SENSITIVE 3
Sequence

ATGGCGCGGCACGCGGGCACGGCGCTCCTGGACCTGGTGGCGGGGCAGGTGGACCCGGGC
GCGCCGGGGTTCTGGCGCGACTTCCTGGTCGGCATGCTCAAGCCGGCGGCGGCCACGGCC
GTGGTGGCCATGGCCGTCGGGCTCAGCTTCTCGCAGCGCCTGGGGCTCGAGGGCGAGATG
CTCTACGCCATCGCACGCGCCTTCCTCCAGCTCTCCGCCATCGGCTTCGTCCTCCAGTTC
ATCTTCGCCCAGAAGAACGCGCTCTGGATCCTCCTCGCCTACCTCTTCATGGTGACGGTC
GCCGGGTACACGGCGGGGCAGCGCGCCAGGCAGGTGCCGCGCGGGAAGCGCATCGCCTGC
GTCTCCATCCTCGTCGGCACCGCCGTCACCATGCTCCTGCTCGTCCTCCTCGACGTCTTC
CCCTTCACCCCGCGCTACATCATCCCCGTCGCCGGCATGATGGTCGGCAACGCCATGACC
GTCACCGGCGTCACCATGAAGAAGCTCCGGGAGGACGTCAAGATCCAGAGGAACCTGGTG
GAGACGGCGCTGGCGCTGGGCGCGACGCCGCGGCAGGCGACGCTGCAGCAGGTGAAGCGG
TCGCTGGTCATCGCGCTGTCCCCGGTGATCGACAGCGCCAAGACGGTGGGGCTCATCGCG
CTGCCGGGCGCCATGACGGGGCTCATCATGGGCGGCGCGTCGCCGCTGGAGGCCATCCAG
CTGCAGATCGTCGTCATGAACATGCTCATGGGCGCCTCCACCGTCAGCAGCATCCTCTCC
ACCTACCTCTGCTGGCCGGCCTTCTTCACCAAGGCCTTCCAGCTCGACGACAGGGTCTTT
GCAGACTAA

Peptide Sequence

PEP ID

Zm00001d011001_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:136349224:136350587:1 gene:Zm00001d011001 transcript:Zm00001d011001_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ALUMINUM SENSITIVE 3
Sequence

MARHAGTALLDLVAGQVDPGAPGFWRDFLVGMLKPAAATAVVAMAVGLSFSQRLGLEGEM
LYAIARAFLQLSAIGFVLQFIFAQKNALWILLAYLFMVTVAGYTAGQRARQVPRGKRIAC
VSILVGTAVTMLLLVLLDVFPFTPRYIIPVAGMMVGNAMTVTGVTMKKLREDVKIQRNLV
ETALALGATPRQATLQQVKRSLVIALSPVIDSAKTVGLIALPGAMTGLIMGGASPLEAIQ
LQIVVMNMLMGASTVSSILSTYLCWPAFFTKAFQLDDRVFAD

Transcript Sequence

Transcript ID

Zm00001d011001_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:136349224:136350587:1 gene:Zm00001d011001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ALUMINUM SENSITIVE 3
Sequence

GATGAACCCTGGCCAGATTCCTCGGCACGTGGGCCCACCTCACCAGCCTCAGCTGCCGCC
TGCCTGACTTGGGCCCTGCCCCTTCCTGTACCTGTCCTCAAGGTCGCCCCCGCGCTGCCC
ATCCCCCTCCCCCTCCTCCTTCCTCGGCAGCTCGTGGCGCTCCAGTCCACAGAGGAGAGG
ACACGACACGACGAGGGGCCAGGCAGCAAGCTCTGCTCAGTCCGTTCCGCGGGCCGGTCG
GTCGGCGATGGCGCGGCACGCGGGCACGGCGCTCCTGGACCTGGTGGCGGGGCAGGTGGA
CCCGGGCGCGCCGGGGTTCTGGCGCGACTTCCTGGTCGGCATGCTCAAGCCGGCGGCGGC
CACGGCCGTGGTGGCCATGGCCGTCGGGCTCAGCTTCTCGCAGCGCCTGGGGCTCGAGGG
CGAGATGCTCTACGCCATCGCACGCGCCTTCCTCCAGCTCTCCGCCATCGGCTTCGTCCT
CCAGTTCATCTTCGCCCAGAAGAACGCGCTCTGGATCCTCCTCGCCTACCTCTTCATGGT
GACGGTCGCCGGGTACACGGCGGGGCAGCGCGCCAGGCAGGTGCCGCGCGGGAAGCGCAT
CGCCTGCGTCTCCATCCTCGTCGGCACCGCCGTCACCATGCTCCTGCTCGTCCTCCTCGA
CGTCTTCCCCTTCACCCCGCGCTACATCATCCCCGTCGCCGGCATGATGGTCGGCAACGC
CATGACCGTCACCGGCGTCACCATGAAGAAGCTCCGGGAGGACGTCAAGATCCAGAGGAA
CCTGGTGGAGACGGCGCTGGCGCTGGGCGCGACGCCGCGGCAGGCGACGCTGCAGCAGGT
GAAGCGGTCGCTGGTCATCGCGCTGTCCCCGGTGATCGACAGCGCCAAGACGGTGGGGCT
CATCGCGCTGCCGGGCGCCATGACGGGGCTCATCATGGGCGGCGCGTCGCCGCTGGAGGC
CATCCAGCTGCAGATCGTCGTCATGAACATGCTCATGGGCGCCTCCACCGTCAGCAGCAT
CCTCTCCACCTACCTCTGCTGGCCGGCCTTCTTCACCAAGGCCTTCCAGCTCGACGACAG
GGTCTTTGCAGACTAAGATACATGCTGGATTGTAATGTAACCGAGTCCCAGTTGTTTGAG
CCTTTTGAGGTAGAAACAGAGCTAAGAGCTGTGGCTTTCGGTGTCACTGTTGATGCTGAG
TTCTTGGGGAGGCTCTCGGGCGGGTATCGCGCGTTGGATCCCCATTTGACCAAACAGTTT
TTAGATAATGGAAAAAATCAAAAATC