Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010974_T072
CDS Infomation	cds chromosome:B73_RefGen_v4:8:135531146:135542051:-1 gene:Zm00001d010974 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 17 description:E3 SUMO-protein ligase SIZ1
Sequence	ATGTCGGACCTCGCTTCCAGCTGCAAGGATAAACTTGCGTATTTTAGAATAAAGGAGCTC AAAGATATCTTAAATCAGCTGGGGTTACCGAAGCAAGGAAAGAAGCAGGACCTTGTTGAC AGGGTATTGGCTATTTTATCAGATGAGCAAGGTCAACATCATCATGGATGGGGAAGGAAA AATGCTCTTACAAGGGAGGCGGTGGCAAAAGTTGTTGATGACACATACAGCAGGAAAATG CAAGTATGTGCTCCTGACCTTCCCTCTAGAAGCCACAGTGGATCAGATTTCAGTCATTTC AGGCCCAAAGAGGAAGCGCCTGACTTCTACCATGTGGATACTAAGGTCCGCTGCCTTTGC AATAGCACATTGCTAAATGACAATATGATTAAGTGCGAAGATGGCAAATGCCAGGTGTGG CAGCATATTACCTGCGTACTCATTCCAGATAAGCCCACGGAGGGTGCTGGCCCTGATATT CCACCTCATTTTTATTGTGAACTGTGCCGACTGAAACGGGCAGACCCGTTTTGGGTGACT ACCGGAAATCCATTACTACCTGTGAAATTTATGTCATCTGGTGTTGGAAATGATGGAGCA AGTGTACCTCAAATTGTGGAGAAGACTTTCCAACTTTCCCGAGCAGATAGAGAAACAGTT CAGAGACAAGAATATGATCTCCAGGTTTGGTGCATCCTTATAAATGACAAAGTCCAGTTC AGGATGCAATGGCCTCAATATGCAGAATTGCAAGTGAACGGTATTCCTGTACGAGTAATG ACCAGGCCCGGTTCTCAGTTACTAGGGATAAATGGGCGGGATGATGGGCCACTGGTAACC ACATGCAGTAGAGAAGGGATCAACAAAATTAGCTTATCTAGAGTGGATGCTCGAACCTTT TGCTTTGGAGTTCGAATTGTTAGGAGGAGGACTGTTCCTCAGGTATTAAATTTGATCCCA AAGGAAGGTGAAGGGGAGTCTTTTGAGGATGCTCTTGCTCGTGTTCGTCGCTGTCTTGGA GGTGGAGGTGCTACGGACAATGCTGATAGTGATAGCGACCTGGAAGTGGTTACTGAATCT GTTACAGTCAACCTTCGTTGCCCTAATAGCGGATCCAGAATGAGGATTGCTGGAAGGTTC AAGCCTTGTGTTCACATGGGCTGTTTTGATCTTGAAACTTTTGTGGAATTGAATCAACGC TCACGCAAGTGGCAATGCCCAATATGTTTAAAGAATTACTCTCTCGAGAACTTGATGATC GATCCTTATTTCAACCGGATTACATCTTTGTGA

Peptide Sequence

PEP ID	Zm00001d010974_P072
PEP Infomation	pep chromosome:B73_RefGen_v4:8:135531146:135542051:-1 gene:Zm00001d010974 transcript:Zm00001d010974_T072 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 17 description:E3 SUMO-protein ligase SIZ1
Sequence	MSDLASSCKDKLAYFRIKELKDILNQLGLPKQGKKQDLVDRVLAILSDEQGQHHHGWGRK NALTREAVAKVVDDTYSRKMQVCAPDLPSRSHSGSDFSHFRPKEEAPDFYHVDTKVRCLC NSTLLNDNMIKCEDGKCQVWQHITCVLIPDKPTEGAGPDIPPHFYCELCRLKRADPFWVT TGNPLLPVKFMSSGVGNDGASVPQIVEKTFQLSRADRETVQRQEYDLQVWCILINDKVQF RMQWPQYAELQVNGIPVRVMTRPGSQLLGINGRDDGPLVTTCSREGINKISLSRVDARTF CFGVRIVRRRTVPQVLNLIPKEGEGESFEDALARVRRCLGGGGATDNADSDSDLEVVTES VTVNLRCPNSGSRMRIAGRFKPCVHMGCFDLETFVELNQRSRKWQCPICLKNYSLENLMI DPYFNRITSL

Transcript Sequence

Transcript ID	Zm00001d010974_T072
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:135531146:135542051:-1 gene:Zm00001d010974 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 17 description:E3 SUMO-protein ligase SIZ1
Sequence	GACGAACCCGTCCCACAAGCACGCGCGACGCGAGCCAAGGAAGACGAGAGCGAGGTGGAG AGAGAGAGAGAGAGGAAAACCCTGCCCCGTCCAGGCAGCCGTCGTCGACGCAAACGGCGG AGGCCACAGAGACGCCACGCGAGGGAGCCCCGCCGCAGCAGCACCCGCGCCGTCCCAATT CGGCGCCCCGATCGCCGGATCTCCTCGCCGGCGCCGGGGCCCTCGATCGCCCTCTCCCCA TGCCCGTGCCCCTCCGGGGGTTTCATTGCGCGGGCGCCGGCCATGTCGGACCTCGCTTCC AGCTGCAAGGATAAACTTGCGTATTTTAGAATAAAGGAGCTCAAAGATATCTTAAATCAG CTGGGGTTACCGAAGCAAGGAAAGAAGCAGGACCTTGTTGACAGGGTATTGGCTATTTTA TCAGATGAGCAAGGTCAACATCATCATGGATGGGGAAGGAAAAATGCTCTTACAAGGGAG GCGGTGGCAAAAGTTGTTGATGACACATACAGCAGGAAAATGCAAGTATGTGCTCCTGAC CTTCCCTCTAGAAGCCACAGTGGATCAGATTTCAGTCATTTCAGGCCCAAAGAGGAAGCG CCTGACTTCTACCATGTGGATACTAAGGTCCGCTGCCTTTGCAATAGCACATTGCTAAAT GACAATATGATTAAGTGCGAAGATGGCAAATGCCAGGTGTGGCAGCATATTACCTGCGTA CTCATTCCAGATAAGCCCACGGAGGGTGCTGGCCCTGATATTCCACCTCATTTTTATTGT GAACTGTGCCGACTGAAACGGGCAGACCCGTTTTGGGTGACTACCGGAAATCCATTACTA CCTGTGAAATTTATGTCATCTGGTGTTGGAAATGATGGAGCAAGTGTACCTCAAATTGTG GAGAAGACTTTCCAACTTTCCCGAGCAGATAGAGAAACAGTTCAGAGACAAGAATATGAT CTCCAGGTTTGGTGCATCCTTATAAATGACAAAGTCCAGTTCAGGATGCAATGGCCTCAA TATGCAGAATTGCAAGTGAACGGTATTCCTGTACGAGTAATGACCAGGCCCGGTTCTCAG TTACTAGGGATAAATGGGCGGGATGATGGGCCACTGGTAACCACATGCAGTAGAGAAGGG ATCAACAAAATTAGCTTATCTAGAGTGGATGCTCGAACCTTTTGCTTTGGAGTTCGAATT GTTAGGAGGAGGACTGTTCCTCAGGTATTAAATTTGATCCCAAAGGAAGGTGAAGGGGAG TCTTTTGAGGATGCTCTTGCTCGTGTTCGTCGCTGTCTTGGAGGTGGAGGTGCTACGGAC AATGCTGATAGTGATAGCGACCTGGAAGTGGTTACTGAATCTGTTACAGTCAACCTTCGT TGCCCTAATAGCGGATCCAGAATGAGGATTGCTGGAAGGTTCAAGCCTTGTGTTCACATG GGCTGTTTTGATCTTGAAACTTTTGTGGAATTGAATCAACGCTCACGCAAGTGGCAATGC CCAATATGTTTAAAGAATTACTCTCTCGAGAACTTGATGATCGATCCTTATTTCAACCGG ATTACATCTTTGTGAAGATGTTAATGAGCTTGATGTTAAACCTGATGGGTCATGGCGTGT GAAGGGTGATGCCGCTACCAGAGATCTATCTCAGTGGCATATGCCTGATGGTACTCTTTG TGACTCAAAGGAAGATACAAACCCTGGTGTCGTTAGTGTTAATGAGTTCAAGAGAGAGGG TACTTCTGATGGACATAGAACTTTGAAACTTGGAATTAAAAAAACCCCTAATGGATTATG GCAGGTTAGCAGTAAACCAGATGATAAGAAACCCGTGGTTAGAAATCACATCCAAAACAA CACGGGGTACTCAATACCAAACATAGTACCTATGATCAGTAGCCCCACTGGGAGTTGCAG AGATGGTGAAGATGTAAGTGTGAACCAAGAAGGGGGTGGTATTCAGTTTGATATATCATT GAACCAAGAGTTTGACAGTTTTGCGCATAACTTTGGTCAAACATACAATACAGAGGATAG GCAACAAGAGCCACAACATAATGCTGCAGATGTCATTGTTCTTAGTGATTCTGATGAAGA AAATGACCCGATTGTTCGCCTGCCAGCTGTCTATGCAAATACTCCTACAAATGGTGACAG TTTCCCTTTCGTCACTGATGCTGCTGTATCTGGATATCCTGAAGGGTACCAGGAGGATGC TGGGGTTGGTACAAGTGGCCTTGGTTTATTGAGCAACAATACTGGTGATTTTGAAATAAA TAACTGGCAAATGCATTCTTATCCACAACCAGAGCAAGGGTTCCAGTTTTTTGGGACTGA TACTGATGTTGGCAATCCTTTTGTTGGTCCGCATAATTCCTTTAGTATTACACCAGAAGA CTACTCCCTTGACTGTAATGTTGGCATAGAGGATCCATCTGCAGCTCACGATGTCTCAAT TTGCCGAAACAGTAATGATGTGCATGGAAGCTTGGTTGATAACCCATTGGCTTTAGCAGG TGACGATCCATCTTTGCAAATTTTCCTTCCAAGTCAACCTTCTACTGTTCCCCTTCAGGA AGAACTGAGTGAGCGCGCTAATACTCCAAATGGAGTCCACCCTGATGATTGGAGGATATC TCTTACGCTTGCGGCTGGTGGAGGGGGTAATGAAGAACCTACAAGTGTTGATGGCCTAAA ATCACAGCCAAAAGTTCCATCAAAAGAGGCAGGAGTTGAACCTTTACTTGATGCTGCTTC TGCTCTCCCAAGCATGAACAATGACAGATGTAATGGATCTAATCTAAACCCGAGAAGGAT TGAAAATATATTTTCTCATCCTCGCCAACCACGGTCTGTTAGGCCTCGTTTGTGTTTGTC ATTAGATTCTGATTCAGAGTAGTTCGGACATCACACTGGGATAGCTGAATTTGCTATTAA TCTGGCAAAGTTGGCTTCCAGAATCTTGATTTTTATTGTGGAGGGCTATCAAGTTATTCT GGTTGATACAAAGAGAAACACCAGTGTGGATGCTTTATTGCATTAACCTGGTAAGATTCA AGTGTTCTATATGATCCAAGTGGGATCTCCATAGAGTTCATCTAATGGTAAGGACAGATG ATTAGCCTCTTCATGTGATGGATTTGCTGCTATGTTTTATGAACTATTTCATTGCAGTTT TTGTGATTCAAGTAGCTGAGTTGTAATTAAACATGTTGAACTTCAATGCCCTATGAAATA AAAATGAAGTTGAC