Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010927_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:133818073:133822277:1 gene:Zm00001d010927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
Sequence	ATGAGCCCCCCGGCCCCGGCCGCCGCGGCGGCGGCGGCGCCGCGAACGGTCGCCTCGGCG GTGCTCCGCGTCCAGATGGCGCTCCTCGACGGCGCCGCGGTGTCCAGCGAGGCCCTCATC CACGCGGCCGCCTCCGCGCTCCTCTCCCGCGCCGACTACGACGACGTCGTCACCGAGCGC ACCATCTCGGACGTCTGCGGCAACCCCGCGTGCCCCAACCCTCTCTCCTCCTCCTCCGCC GCCGCCACGGGGCCCCGCTTCCACATCGCCCTCAGCGAGCACCGCGTCTACGACCTCGAG GAGGCGCGCAAGTTCTGCTCCGAGCGCTGCCTCGTCGCCTCCAAGGCCTTGGCCGCCTCG CTCCCGCACGACCGGCCCTACGGGGTCCCGCTCGACCGCCTCGCCGCGGTCGTCGCGCTC GTTGAGGGCGCCGCCGCAGGGGACGGGAGCGGGTTAGGGTTCCAGGGACTGGATGGGAAT GGGAAGGTGGAGGACGGGGGAAGGAAGGTGGAGATCAAGGAGAAGCAGGTCGCCGGGGCT GGCGAGGTCTTGCTGCAGGACTGGGTTGGGCCCTCCGATGCCATTGAGGGTTATGTGCCG CGCCATGACCGCAGTGCTCATGGACAAAAGCCACAGGTTCAGCAGAACGAAGGTGCTGGA CCTGAACTGTCCAGAACTGAGAATGTGGATTATGGTGCTGCTGCTCCTGGTGAAGATGGC ATGACAAGTTCACCTTCATTGGTTAAAACACACGTGAGCTCCGAAGTAATAGTTGAGAGA ATGGGCAGCCTGGTTCTTGGTGAGAATACAAGGACGCCTAGAAAGAAGAAAACTAAAACT CCATCAAAGATGTTAGAGCAAGAGGAAGATAACAGTATGCTGTCATCTTGCATATCTGAT TCCATTGCCAAGCAGCTTGAGGATGTAGTTTTGGAAGAGAGAAAAGGCAGTCAGAAAAAT AAAATGAGTAAAGCATCATCAAGAGCACAGAAGGGTAAGTCTACAAAAAGGCCTGCTTCG ACAAACATGGAGGAAAATGCTATGAATCAGTATAACTACTTGTCAAGTTCTGTATTGGTA GACAATCACCCCTCATCATCTCAATCTTCAGAAAAAGATTCAACACAGGCTTACTCTGAA CAACTGTGTGAAGAATTCAGTGAAGCAGTGAACATTGGAAATGATGAGACAAGTGATGAA AAGATGAGACCTGCATGGAAGTCTTCGTTGAAAGTTGCCGGGTCTAAGAGCAGTAGGCAG TCTGTTACATGGGCAGATGAGAATGGAAGTGTCCTAGAAACAAGCAAAGCATATGAAAGC CCTTCAAGTAGTATAAAACGACCTGAGGAAGGCATAGACAATTCACTAAGGCGTGCATCT GCTGAAGCGTGTGCTGCAGCACTTGTTGAGGCAGCAGAAGCTATTTCTTCAGGCACAGCA GAAGCAGAAGATGCAGTTTCAAATGCTGGAATCATCATTCTGCCTGACATGCTTAACCAG CAAGAACATGACAATGGCAAAAACAGTGGCGGAGATGATGACCCTGAGATAGATAGGGAT GTTATCAAGTGGCCTAAGAAACCTGTACTTCTGGATACAGACTTGTTTGAAGTTGATGAT TCTTGGCATGACATGCCTCCAGAAGGTTTTAGTCTAACTCTGTCTGCTTTCGGGACGATG TGGGCCGCGCTATTCGGATGGATATCCAGTTCGTCTTTGGCCTATGTGTATGGGCTTGAA AGGGGTTCAGTGGAGGAGTTGTTGATTGCCAATGGGAGGGAATGTCCTGAGAAGACAGTT CTGAAGGATGGGCTCTCATTGGAGATTAGAAGAGCTCTAGATTCTTGCGTTTGTAACGCC GTGCCAGTACTCATATCAAACTTGAGGTTGCAGATACCGGTTTCAAAACTGGAGATTACT CTGGGCTACTTGATTGACACAATGTCGTTTGTTGACGCCCTGCCTTCTCTGCGATCGAGG CAGTGGCAGGCTGTGGTTCTGATGTTGAACGCTGCTCAGGTTAGCAGAGAGGAGTATGAC TCCATGGTGGACCTGTTTCTACCGTTTGGAAGATCCGTCCAGGCGATCACGCCCATGTAA

Peptide Sequence

PEP ID	Zm00001d010927_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:133818073:133822277:1 gene:Zm00001d010927 transcript:Zm00001d010927_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
Sequence	MSPPAPAAAAAAAPRTVASAVLRVQMALLDGAAVSSEALIHAAASALLSRADYDDVVTER TISDVCGNPACPNPLSSSSAAATGPRFHIALSEHRVYDLEEARKFCSERCLVASKALAAS LPHDRPYGVPLDRLAAVVALVEGAAAGDGSGLGFQGLDGNGKVEDGGRKVEIKEKQVAGA GEVLLQDWVGPSDAIEGYVPRHDRSAHGQKPQVQQNEGAGPELSRTENVDYGAAAPGEDG MTSSPSLVKTHVSSEVIVERMGSLVLGENTRTPRKKKTKTPSKMLEQEEDNSMLSSCISD SIAKQLEDVVLEERKGSQKNKMSKASSRAQKGKSTKRPASTNMEENAMNQYNYLSSSVLV DNHPSSSQSSEKDSTQAYSEQLCEEFSEAVNIGNDETSDEKMRPAWKSSLKVAGSKSSRQ SVTWADENGSVLETSKAYESPSSSIKRPEEGIDNSLRRASAEACAAALVEAAEAISSGTA EAEDAVSNAGIIILPDMLNQQEHDNGKNSGGDDDPEIDRDVIKWPKKPVLLDTDLFEVDD SWHDMPPEGFSLTLSAFGTMWAALFGWISSSSLAYVYGLERGSVEELLIANGRECPEKTV LKDGLSLEIRRALDSCVCNAVPVLISNLRLQIPVSKLEITLGYLIDTMSFVDALPSLRSR QWQAVVLMLNAAQVSREEYDSMVDLFLPFGRSVQAITPM

Transcript Sequence

Transcript ID	Zm00001d010927_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:133818073:133822277:1 gene:Zm00001d010927 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
Sequence	GCTGCCACTTCGCTTGAACTCATTTGCAATTGCGAACGCTTCTTCTCCCAGTCCCAGCAC GCCCAACCCCGTCGCCGCCTTCTCGAACCTTCCGAAGATGAGCCCCCCGGCCCCGGCCGC CGCGGCGGCGGCGGCGCCGCGAACGGTCGCCTCGGCGGTGCTCCGCGTCCAGATGGCGCT CCTCGACGGCGCCGCGGTGTCCAGCGAGGCCCTCATCCACGCGGCCGCCTCCGCGCTCCT CTCCCGCGCCGACTACGACGACGTCGTCACCGAGCGCACCATCTCGGACGTCTGCGGCAA CCCCGCGTGCCCCAACCCTCTCTCCTCCTCCTCCGCCGCCGCCACGGGGCCCCGCTTCCA CATCGCCCTCAGCGAGCACCGCGTCTACGACCTCGAGGAGGCGCGCAAGTTCTGCTCCGA GCGCTGCCTCGTCGCCTCCAAGGCCTTGGCCGCCTCGCTCCCGCACGACCGGCCCTACGG GGTCCCGCTCGACCGCCTCGCCGCGGTCGTCGCGCTCGTTGAGGGCGCCGCCGCAGGGGA CGGGAGCGGGTTAGGGTTCCAGGGACTGGATGGGAATGGGAAGGTGGAGGACGGGGGAAG GAAGGTGGAGATCAAGGAGAAGCAGGTCGCCGGGGCTGGCGAGGTCTTGCTGCAGGACTG GGTTGGGCCCTCCGATGCCATTGAGGGTTATGTGCCGCGCCATGACCGCAGTGCTCATGG ACAAAAGCCACAGGTTCAGCAGAACGAAGGTGCTGGACCTGAACTGTCCAGAACTGAGAA TGTGGATTATGGTGCTGCTGCTCCTGGTGAAGATGGCATGACAAGTTCACCTTCATTGGT TAAAACACACGTGAGCTCCGAAGTAATAGTTGAGAGAATGGGCAGCCTGGTTCTTGGTGA GAATACAAGGACGCCTAGAAAGAAGAAAACTAAAACTCCATCAAAGATGTTAGAGCAAGA GGAAGATAACAGTATGCTGTCATCTTGCATATCTGATTCCATTGCCAAGCAGCTTGAGGA TGTAGTTTTGGAAGAGAGAAAAGGCAGTCAGAAAAATAAAATGAGTAAAGCATCATCAAG AGCACAGAAGGGTAAGTCTACAAAAAGGCCTGCTTCGACAAACATGGAGGAAAATGCTAT GAATCAGTATAACTACTTGTCAAGTTCTGTATTGGTAGACAATCACCCCTCATCATCTCA ATCTTCAGAAAAAGATTCAACACAGGCTTACTCTGAACAACTGTGTGAAGAATTCAGTGA AGCAGTGAACATTGGAAATGATGAGACAAGTGATGAAAAGATGAGACCTGCATGGAAGTC TTCGTTGAAAGTTGCCGGGTCTAAGAGCAGTAGGCAGTCTGTTACATGGGCAGATGAGAA TGGAAGTGTCCTAGAAACAAGCAAAGCATATGAAAGCCCTTCAAGTAGTATAAAACGACC TGAGGAAGGCATAGACAATTCACTAAGGCGTGCATCTGCTGAAGCGTGTGCTGCAGCACT TGTTGAGGCAGCAGAAGCTATTTCTTCAGGCACAGCAGAAGCAGAAGATGCAGTTTCAAA TGCTGGAATCATCATTCTGCCTGACATGCTTAACCAGCAAGAACATGACAATGGCAAAAA CAGTGGCGGAGATGATGACCCTGAGATAGATAGGGATGTTATCAAGTGGCCTAAGAAACC TGTACTTCTGGATACAGACTTGTTTGAAGTTGATGATTCTTGGCATGACATGCCTCCAGA AGGTTTTAGTCTAACTCTGTCTGCTTTCGGGACGATGTGGGCCGCGCTATTCGGATGGAT ATCCAGTTCGTCTTTGGCCTATGTGTATGGGCTTGAAAGGGGTTCAGTGGAGGAGTTGTT GATTGCCAATGGGAGGGAATGTCCTGAGAAGACAGTTCTGAAGGATGGGCTCTCATTGGA GATTAGAAGAGCTCTAGATTCTTGCGTTTGTAACGCCGTGCCAGTACTCATATCAAACTT GAGGTTGCAGATACCGGTTTCAAAACTGGAGATTACTCTGGGCTACTTGATTGACACAAT GTCGTTTGTTGACGCCCTGCCTTCTCTGCGATCGAGGCAGTGGCAGGCTGTGGTTCTGAT GTTGAACGCTGCTCAGGTTAGCAGAGAGGAGTATGACTCCATGGTGGACCTGTTTCTACC GTTTGGAAGATCCGTCCAGGCGATCACGCCCATGTAAACGAGAAGCCGTGTGAATCTGCA TTCCGGAAGCTGCGTGAATCGTAGGGTCTGATCTGATATTTAGTTTTACACAAGTCGCTG TCTAGAACGAGCCATGTATGTATGATTGATTGGTTATCTATTGAGCAAGATGCGCTCTGG CAATTTGTGGAAGCTGAAATACTTGCGACCATGACGCCTGCCTGTCAGTTTGCGATATTC TTTCAGGTTGTGAGAAATTGATTTGCTGTCGTTCTCAGCTA