Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010899_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:132496390:132499200:1 gene:Zm00001d010899 gene_biotype:protein_coding transcript_biotype:protein_coding description:Os05g0140333 protein
Sequence

ATGTCGAGCCCGACGACGACGGAGCAGCAGCGTGTCAGCTTCATCGTCGACGGAGAGGAG
CATGAGCAGCAGCAGAAGCATGACGACCTTGTTAGCCGCGCCGCCGTGGTGGCGAGGGAG
GTGAGCAAGCGGGTGTCTCGCCTGGCCGTCGAGGGAGGAGAAGGCGACGCCGACCGCAAG
GCCAACTTCGACGCCGGGGTGGCGGCAGCGCGGCGCTCGTTCGGTGGCACGCGGACGCTG
CCGCCGCCGCACGCGTGGCTGGCGATCGAGGACACGAGGAGGAGGCAGAAGCAACAGCAG
CAGCCGGAGGAGCACGGCGACAGCGACGACCCGGAGGCGGAGCAGTGGGCGCGTCTCTTC
CGGGGCGGCGGGATGCAGCAGCAGCAGCAGCAAAGGCGGAGCAGCTTCAGCGTGGTGCGG
CGCGAGCGCGCGGCGCGGGAGGCGTGGCTGGACCACGCGTGGGAGGCGAAGCGGAGCTGG
CACCAGCGCAACGGCGGCGCCCCCGACGCGGACACCCCCGTGGTGGTGGTGGTCGGCACG
TCGCCGAGGTCGTCGTCATCGTCCCACTCCCAGCATCAGCAGGCCGGTGGCGGGGTGGCC
ATGGACGTGGAGGAGGTCCGCGCGTGCCGGGACCTCGGGCTGGAGCTGCCCTCCGACTGC
ACCGTGGAGATCCAGTGCTACGGGCTGTCCGGAGGCGCCGGCAGCCCCGGCAGCGGCCCC
GACTCACCGTGCGACGGCGCCGACTCCTGCCCTGATGCAGCAGGAGGAGGAGCGGATCCG
ATGGACGTGAAGGCTCGGCTCAAGGTGTGGGCGCAGGCGGTGGCGCTTGCATCCACCACC
ACCCATCTCGCCTCATGA

Peptide Sequence

PEP ID

Zm00001d010899_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:132496390:132499200:1 gene:Zm00001d010899 transcript:Zm00001d010899_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Os05g0140333 protein
Sequence

MSSPTTTEQQRVSFIVDGEEHEQQQKHDDLVSRAAVVAREVSKRVSRLAVEGGEGDADRK
ANFDAGVAAARRSFGGTRTLPPPHAWLAIEDTRRRQKQQQQPEEHGDSDDPEAEQWARLF
RGGGMQQQQQQRRSSFSVVRRERAAREAWLDHAWEAKRSWHQRNGGAPDADTPVVVVVGT
SPRSSSSSHSQHQQAGGGVAMDVEEVRACRDLGLELPSDCTVEIQCYGLSGGAGSPGSGP
DSPCDGADSCPDAAGGGADPMDVKARLKVWAQAVALASTTTHLAS

Transcript Sequence

Transcript ID

Zm00001d010899_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:132496390:132499200:1 gene:Zm00001d010899 gene_biotype:protein_coding transcript_biotype:protein_coding description:Os05g0140333 protein
Sequence

CCCACCCAAAGCAACCACTGATCCCTCGCTTTCTCTCTCTCTCGCTCACCTGCTCCACTT
TTCGTCTCCGATCCCTCGCGATCCACACATAACTAGCTAGTTTGACTATCTAGCTTGTAG
GTGCAGTGTAGGTCAGGCATGTCGAGCCCGACGACGACGGAGCAGCAGCGTGTCAGCTTC
ATCGTCGACGGAGAGGAGCATGAGCAGCAGCAGAAGCATGACGACCTTGTTAGCCGCGCC
GCCGTGGTGGCGAGGGAGGTGAGCAAGCGGGTGTCTCGCCTGGCCGTCGAGGGAGGAGAA
GGCGACGCCGACCGCAAGGCCAACTTCGACGCCGGGGTGGCGGCAGCGCGGCGCTCGTTC
GGTGGCACGCGGACGCTGCCGCCGCCGCACGCGTGGCTGGCGATCGAGGACACGAGGAGG
AGGCAGAAGCAACAGCAGCAGCCGGAGGAGCACGGCGACAGCGACGACCCGGAGGCGGAG
CAGTGGGCGCGTCTCTTCCGGGGCGGCGGGATGCAGCAGCAGCAGCAGCAAAGGCGGAGC
AGCTTCAGCGTGGTGCGGCGCGAGCGCGCGGCGCGGGAGGCGTGGCTGGACCACGCGTGG
GAGGCGAAGCGGAGCTGGCACCAGCGCAACGGCGGCGCCCCCGACGCGGACACCCCCGTG
GTGGTGGTGGTCGGCACGTCGCCGAGGTCGTCGTCATCGTCCCACTCCCAGCATCAGCAG
GCCGGTGGCGGGGTGGCCATGGACGTGGAGGAGGTCCGCGCGTGCCGGGACCTCGGGCTG
GAGCTGCCCTCCGACTGCACCGTGGAGATCCAGTGCTACGGGCTGTCCGGAGGCGCCGGC
AGCCCCGGCAGCGGCCCCGACTCACCGTGCGACGGCGCCGACTCCTGCCCTGATGCAGCA
GGAGGAGGAGCGGATCCGATGGACGTGAAGGCTCGGCTCAAGGTGTGGGCGCAGGCGGTG
GCGCTTGCATCCACCACCACCCATCTCGCCTCATGACTCCATATACCGCCGCAACCTCCA
GCTCGGCCGGGACAGCACTGCACTCAAACGAATCGAAGCAAAGTAGCCGAGAAAACAGGA
GTGTCGTCTCTAGCTATAACGAATCAAATGTAGACTCCCATTTTATATCCATATACACTA
CTAAGTACTTACTCTTCGATTTCGAATAATGTAAACCCCTAGTGTGAGAGATATCTAAGC
GTCTGTAGCTTGTGTGTGCAAGGAATTGTATCAATGTGAGGTTGCCTTTTTAACAAAGCT
ATATATAGAGATAGGACTGGGCGTTCGGTTCTTCGGTTCAGTTCAGTTCGGTT