Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010880_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:8:131986542:131992085:1 gene:Zm00001d010880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGCAACTTTCTGGTAATTTCTTGCTGATAACATCAGAGTTGGTGTCTTTAGTGTCTAGG GTATGGTTGCCAGGTAGGCCTCTCAGCTGTGCTATTTGTGAACACATTTGTAGTTTACCC TCAGCTGTGAACACCTTCTGGTTTATCTATTTACTTGCACGAGAAACTTATATGACAAGA ATTTGTTTTGATAGTTATGCCATAGTTAGTGATATGAGTGCTGCTGGACTTGGATTAAAC AAGTTTTGTTATGCTGGATTGATAACTGCATTCAAGAACAAGACACCAACCGCTGAGGAA ACTATGGCGAAGATTCTTGACTTCGTCGGGCAGTCGAAAGGTTGGCAATATGTTGAAAGA GTATCAAAGGACATTGCTGAGAATATAATGATGAATGTGTCAGAGGAAGAACTGTACAAC CTCCCAACAGCAGAATATGTAAATAGGCGAGGAGGATTTGTCTTTAAACAACATACAGTT TATCATGTTGCTCTCCAAGCTTGTGCAGAATTGCGAAGCAAAGAGACACTTGAAGCACTT CTGGAAATGTTCAATAAGGATAATAGAGATGGATCTACTTATGATGCCTACATGGTGATG CAAGCTATGAGGTGTTACCTACGATGTGGAGATATTGATTCTGCTGTTAAGATGTTTGAA GAGTATTCAAGCTCGAGGTCCCCACCCGCTGAGTTGTATGCGACACTTGCTGAGGGAGCT ATGATTGGGTACACTCCAAGAGGAATGCAACTTGCTCAAGAAACTATAGAGAAGATGACT TCAAGAAATTTTTTCTTGAATGCCAAGATGGGAACTGATCTCCTACTTGCAGCTGCCGGT GAAACGGCTGGTGGATATACGACTGCAAATTATGTCTGGGATCTCCTGCAAAGCCGTAAA ATCACTCCAACACTTCCTGCTGTTGAGGCATACCACAAGGGTCTGACGGCGCGAGAGATT CCTTCTGACGATCCACGACTTCTCAATGTTACCCGTGTTTTGGACAACCTGAAGCTCCGA TTTGGACCAAGAAGAAACACTCAGTAA

Peptide Sequence

PEP ID	Zm00001d010880_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:8:131986542:131992085:1 gene:Zm00001d010880 transcript:Zm00001d010880_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MQLSGNFLLITSELVSLVSRVWLPGRPLSCAICEHICSLPSAVNTFWFIYLLARETYMTR ICFDSYAIVSDMSAAGLGLNKFCYAGLITAFKNKTPTAEETMAKILDFVGQSKGWQYVER VSKDIAENIMMNVSEEELYNLPTAEYVNRRGGFVFKQHTVYHVALQACAELRSKETLEAL LEMFNKDNRDGSTYDAYMVMQAMRCYLRCGDIDSAVKMFEEYSSSRSPPAELYATLAEGA MIGYTPRGMQLAQETIEKMTSRNFFLNAKMGTDLLLAAAGETAGGYTTANYVWDLLQSRK ITPTLPAVEAYHKGLTAREIPSDDPRLLNVTRVLDNLKLRFGPRRNTQ

Transcript Sequence

Transcript ID	Zm00001d010880_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:131986542:131992085:1 gene:Zm00001d010880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	CTCCGCAGTCGCAGTGCCGCAGCATCGTCGCCATGGCTCTCCTCAAGAACTCCCTCATGC TCCCGGGGCGGTTGCGCCATGCGGCGGCGGCGCTCACTGCGCGGCGCCACGCGGCGACGT TGACGGAAGAGTACGCGCGCCGGAACTACGCCGATAACAACTCCGAGTACAACACGGTCA TCGGATCGCTCGTCGCTCAGCGCAGGCCCTACCTTCTGCGTGATGCTTACGACGACATGA TGCTTGATGGCGTGAAGCCTGAGCGGGAAACGTTCCACACACTCATAGTCGGTACCATGA AAGGCAGCCGGCTACAAGATGCGCTTTACTTCCGTGATCAGATGAAAGAAATGGGTTTGA AGCCTGATGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGAAAATGCAAGAACTCAG ATGCAGCAATCATGGTTAGTTTTTCTGTGTACCTGAATGCTAACTGTGCTTTTATCATTA TGATATCATTCTCATGCTTGAACTGCTTTATTTTGTTCTTCATGCTCACTGATGCTCCTG TCCTTTACCTGTAACAAAGCTTTTAGAAGAAATGAAGGCACATGATGTTAAGTTGAAAGG AGAAACCTACATTTGTCTACTGAATGCACTTGCATCAACAGGGCAAACTGATCAAGTGTA AGGCACAATTCTTGACAGTATTTATATGCTCCAACAGATATAACAATGCAACTATTGAAA TTGAAATATAACATCACTTGTTGCTTGCCACAGTGCTACTGCCATTTATGGTGGTTCTCG CCACTCTTAGCATAATGACTTGAAGTTTATCAACACAAACCAGCAAAACAGTTTAGCGGA ATTTTGTCAGTCGTACTTGTTCTCTACCCAAAGTTATAGGCTTGAATAGGAGCGAATGAA AAAAAGATACCACGTGCCTGAAACTTTATTTGTGGCTTCTGTTCGGTTTCAACTCTATCC TACACCAACTTGCTTGGGACTAAAAGGCTTTGTTGTCATTGTTGTACTTATTCTCTATGC ATTTTGTTTGTTAAAGGTTCATCCACACTTCTAACAGTTAGCTATCATTTGAGAATATGA GATATGTAAGTACTGATCTCATGGATTTGAAGGTTTAGAGTAATGCAACTTTCTGGTAAT TTCTTGCTGATAACATCAGAGTTGGTGTCTTTAGTGTCTAGGGTATGGTTGCCAGGTAGG CCTCTCAGCTGTGCTATTTGTGAACACATTTGTAGTTTACCCTCAGCTGTGAACACCTTC TGGTTTATCTATTTACTTGCACGAGAAACTTATATGACAAGAATTTGTTTTGATAGTTAT GCCATAGTTAGTGATATGAGTGCTGCTGGACTTGGATTAAACAAGTTTTGTTATGCTGGA TTGATAACTGCATTCAAGAACAAGACACCAACCGCTGAGGAAACTATGGCGAAGATTCTT GACTTCGTCGGGCAGTCGAAAGGTTGGCAATATGTTGAAAGAGTATCAAAGGACATTGCT GAGAATATAATGATGAATGTGTCAGAGGAAGAACTGTACAACCTCCCAACAGCAGAATAT GTAAATAGGCGAGGAGGATTTGTCTTTAAACAACATACAGTTTATCATGTTGCTCTCCAA GCTTGTGCAGAATTGCGAAGCAAAGAGACACTTGAAGCACTTCTGGAAATGTTCAATAAG GATAATAGAGATGGATCTACTTATGATGCCTACATGGTGATGCAAGCTATGAGGTGTTAC CTACGATGTGGAGATATTGATTCTGCTGTTAAGATGTTTGAAGAGTATTCAAGCTCGAGG TCCCCACCCGCTGAGTTGTATGCGACACTTGCTGAGGGAGCTATGATTGGGTACACTCCA AGAGGAATGCAACTTGCTCAAGAAACTATAGAGAAGATGACTTCAAGAAATTTTTTCTTG AATGCCAAGATGGGAACTGATCTCCTACTTGCAGCTGCCGGTGAAACGGCTGGTGGATAT ACGACTGCAAATTATGTCTGGGATCTCCTGCAAAGCCGTAAAATCACTCCAACACTTCCT GCTGTTGAGGCATACCACAAGGGTCTGACGGCGCGAGAGATTCCTTCTGACGATCCACGA CTTCTCAATGTTACCCGTGTTTTGGACAACCTGAAGCTCCGATTTGGACCAAGAAGAAAC ACTCAGTAACTTAGAAACAATATTGTCCCTGATACGATGCAATCAGTAATTTGTCTTTGT TAGGTTTCTGGATGCGAAGGCATGTTTACAGTCCGAAAAACCAAGGAAGTTCATCAGGAT GACGTAAAGCAGAACCACCAGGCATTTGAGGGGCATGGCAGGTGTGGGAATCAAGGTCCG GAAACGGAAGCCAGTTGTTTCCAGGGTTTTCTCGAGAAATCTTCACCTGCCAAGCCTGAA GACCTGAACTCGGATGCACTGGGTTTTGATTTGAAATTTAATGTATCCTATGTTGCCTAC CATTGTTTGACAACCATTTATCCGAACTTTTGATCTAGAAGACAGCGGGAATATAGTTGT GCGCGAGTCAAGCTGTAGGTCGTTCGTTTTGACGCTTCCTCTATGTACTATCTATTAGTA CTAGTCTAATACCCGTGTAATGATATT