Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010868_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:131402311:131405968:-1 gene:Zm00001d010868 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine--tRNA ligase cytoplasmic
Sequence

ATGGCGTCCACCGCCGCCACTGTCACGTTTGGCGGCAAGGGCGCCGCCCTATCGCCGGCC
GCCGTCTACGCGCTCTCCATCGGCCTCGCCGCCCCGGGCATCGACCCTTCGGCGCACAAG
GCGCTCTCCACCCGCGCGCCCTCGCCACAGGAGACCCCCGCGCCCCTTGCCGCCGCGCTC
CCGGCGCTGGCGCCCGCCGAGTCCCGCGCCGCCGCGGCCGTGTTGCTGAACAAGCTGGTC
CTCACTGCGTCCGACTCTGCCTCCGCGCTCGTCACCGCCGCCACGGCCGTCGGCCTCGCA
GGCTCGCTCGACCTCGCCGCCGCGCTGCCGCTCGGCTCCCGGGACGAGGTCGCGGTGGCA
GCGGCTTCCGCGCCTGTCGCGGTCGGGCTCGCAGCGCTGGTCGACTGCTGCGCCGCGCCG
CTCGCCCGCGTTGCCGACGCCGTCGCCGCGCTGTCGTGCGAAGCCGTGCGCGGGGACGCC
GCGGCCTTCGACGTGCAGGCCTCCGGCGACGGGCTCTCCTCCAAGGACGAGGCCGACGTC
GCTGCCGACATCAAGGTGCTCGTCTTCGGGTCCAAGCTTGTCGGCGCTGCCGGGGGCGCC
CCCGCCGCCGCCACGTTCGCCAAGGTGCCCGCGCTGAACGGGATCTTCCGCCAGGCGGTT
CGGGCGCTGCACGCCCAAGTGCGCATCGAGCTCAACGCGCCTGTGAAATTGGGGAAGAAG
GATGCCGGTCAAACCGGTGAGGGAAAGGAGGAGGCATTGGTGGTGCTGGCCACACAGCTC
GCTAGAGCAGTGCAGGCACTGTGCAGGTTGAGTGTCGCCCGGGCAAGGCTCTGTGCCGAG
AGATTTGCTGATGCTGAGCTTCGGGATAAGCTTACTGCTGGCATTAGCGTCGATGATTTG
AGGGGGATGCTTGACAAGGTTTTGATTGATTCAGATGCTGTGTCAGTCTTGAAGGGGGTG
TACAACCACTTGCTCAAGTTCAGGGACTTTCTCTCCTGGGAAGCAGCTATGGCCATGGCA
GTAATTGAAACAGACAGTTCAATTGAGAAGCCGCAATCTGCTGTTGACAACGAAGCAGCT
GGTTCAAGTGAAAAGGCACAGGCTGGTGGGGACAAAGCAAAGGGTGACAAGAAGAGCAAG
AAGAAGAAAACTTTGGGGAAGGGTACATCTGCTGTGCTGATGCTGCTTAGGGACCATGTG
ACAAATGGAAGTACTGTTGCTTCCGTGAATTCTGTGCTTGTTGCAGAGTGGGCAGCCTCT
CTCTCATTGCTCTTTGATCCTAAATGTCCCGGATTGGTGTCCCTTGTGGAGAAAGTGAAG
GAGATTGTTGAGAGCAATGAAGTCAGGAGATTGCCTAAAATTCCTAAGGGTACACGTGAC
TTTGGGAAAGAGCAAATGGCGATAAGAGAGCGAGCATTTTCAATTATAACTAGTGTATTC
AAGATGCACGGTGCTACTGCACTTGATACCCCTGTATTTGAGCTGAGAGAAACCCTTATG
GGAAAATATGGTGAAGACTCAAAATTGATATATGACCTGGCTGATCAGGGTGGTGAGCTT
TGCTCTTTGCGTTATGATCTGACTGTTCCATTTGCCCGGTACGTTGCCATGAATAGCATA
AGCGCACTGAAGAGATACCAGATTGCAAAAGTATATAGGAGAGATAATCCATCAAAGGGA
AGGTACCGAGAATTCTACCAATGTGATTTCGACATTGCTGGTGTATATGAACCTATGGAA
CCGGATTTTGAGGTCATCAAAGTTTTGACTGAGTTGCTGAATCAACTGGATATAGGCACG
TATGAGATAAAATTAAATCACAGAAAGTTGCTGGATGGAATGTTGGAGATTTGTGGTGTG
CCTCCTCAAAAGTTCAGAACCGTTTGCTCGAGTATTGACAAGCTGGACAAGCAAACATTC
GAACAGGTGAAGAAAGAACTGGTGGATGAGAAAGGTATATCAAATGAAACTGCAGATGAA
ATTGGCAATTTAGTGAAGACTAGAGGAGCCCCCTTGGAAGTTTTGATGGAGTTGAGAAAG
GATAGCAGCAAGTTTATGAATAATGAAGGGTCTGTTGCTGCACTGAATGAGCTGGAGATA
TTATTCAAGGCTCTGGATAAAGCAAATGCAATAGACAAGATAGTTTTTGATTTAAGTTTG
GCCAGGGGGCTTGATTACTACACTGGTGTTATATATGAAGCCGTTTTTAAGGGTTCAGCT
CAGGTTGGCTCCATTGCAGCTGGTGGTCGGTACGACAACCTTGTGGGTATGTTCAGCGGG
AAGCAAATCCCCGCTGTTGGTGTGAGCCTTGGAATTGAGAGAGTCTTTGCAATCATGGAG
CAACAGGAGAAAGAAAGAAATGAGAAGATCCGGCCTACAGAGACACAGGTGCTGGTGTCA
ATCCTGGGAAAGGACCTTACACTAGCTGCAGAGCTCGCGAGCGAGCTGTGGAATGCTGGG
TTAAAGGCAGAATTCAAGCTCACTACTAGGGTGGCGAACCACATCAAGTATGCCTTGCAA
TCAGGCATTCCGTGGATGGTGCTAGTCGGTGAGTCTGAGTTGCAGAAGGGAAGTGTTAAA
TTGAAGGATGTTGAAGCCAACCAGGAAGAAGAGGTTGATAGGAAGGATTTTGTTCAAGAG
CTGAAGAAGAGATTGAGTAAACCCAACATTCATTTGAGGCAAAATCAATTACGGCAGAGG
CGGAGAATGATACTGCAGCATTGTAGTTTAAAGTGCTGGGGATGTTTTTGTTAG

Peptide Sequence

PEP ID

Zm00001d010868_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:131402311:131405968:-1 gene:Zm00001d010868 transcript:Zm00001d010868_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine--tRNA ligase cytoplasmic
Sequence

MASTAATVTFGGKGAALSPAAVYALSIGLAAPGIDPSAHKALSTRAPSPQETPAPLAAAL
PALAPAESRAAAAVLLNKLVLTASDSASALVTAATAVGLAGSLDLAAALPLGSRDEVAVA
AASAPVAVGLAALVDCCAAPLARVADAVAALSCEAVRGDAAAFDVQASGDGLSSKDEADV
AADIKVLVFGSKLVGAAGGAPAAATFAKVPALNGIFRQAVRALHAQVRIELNAPVKLGKK
DAGQTGEGKEEALVVLATQLARAVQALCRLSVARARLCAERFADAELRDKLTAGISVDDL
RGMLDKVLIDSDAVSVLKGVYNHLLKFRDFLSWEAAMAMAVIETDSSIEKPQSAVDNEAA
GSSEKAQAGGDKAKGDKKSKKKKTLGKGTSAVLMLLRDHVTNGSTVASVNSVLVAEWAAS
LSLLFDPKCPGLVSLVEKVKEIVESNEVRRLPKIPKGTRDFGKEQMAIRERAFSIITSVF
KMHGATALDTPVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNSI
SALKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMEPDFEVIKVLTELLNQLDIGT
YEIKLNHRKLLDGMLEICGVPPQKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADE
IGNLVKTRGAPLEVLMELRKDSSKFMNNEGSVAALNELEILFKALDKANAIDKIVFDLSL
ARGLDYYTGVIYEAVFKGSAQVGSIAAGGRYDNLVGMFSGKQIPAVGVSLGIERVFAIME
QQEKERNEKIRPTETQVLVSILGKDLTLAAELASELWNAGLKAEFKLTTRVANHIKYALQ
SGIPWMVLVGESELQKGSVKLKDVEANQEEEVDRKDFVQELKKRLSKPNIHLRQNQLRQR
RRMILQHCSLKCWGCFC

Transcript Sequence

Transcript ID

Zm00001d010868_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:131402311:131405968:-1 gene:Zm00001d010868 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine--tRNA ligase cytoplasmic
Sequence

ATGGCGTCCACCGCCGCCACTGTCACGTTTGGCGGCAAGGGCGCCGCCCTATCGCCGGCC
GCCGTCTACGCGCTCTCCATCGGCCTCGCCGCCCCGGGCATCGACCCTTCGGCGCACAAG
GCGCTCTCCACCCGCGCGCCCTCGCCACAGGAGACCCCCGCGCCCCTTGCCGCCGCGCTC
CCGGCGCTGGCGCCCGCCGAGTCCCGCGCCGCCGCGGCCGTGTTGCTGAACAAGCTGGTC
CTCACTGCGTCCGACTCTGCCTCCGCGCTCGTCACCGCCGCCACGGCCGTCGGCCTCGCA
GGCTCGCTCGACCTCGCCGCCGCGCTGCCGCTCGGCTCCCGGGACGAGGTCGCGGTGGCA
GCGGCTTCCGCGCCTGTCGCGGTCGGGCTCGCAGCGCTGGTCGACTGCTGCGCCGCGCCG
CTCGCCCGCGTTGCCGACGCCGTCGCCGCGCTGTCGTGCGAAGCCGTGCGCGGGGACGCC
GCGGCCTTCGACGTGCAGGCCTCCGGCGACGGGCTCTCCTCCAAGGACGAGGCCGACGTC
GCTGCCGACATCAAGGTGCTCGTCTTCGGGTCCAAGCTTGTCGGCGCTGCCGGGGGCGCC
CCCGCCGCCGCCACGTTCGCCAAGGTGCCCGCGCTGAACGGGATCTTCCGCCAGGCGGTT
CGGGCGCTGCACGCCCAAGTGCGCATCGAGCTCAACGCGCCTGTGAAATTGGGGAAGAAG
GATGCCGGTCAAACCGGTGAGGGAAAGGAGGAGGCATTGGTGGTGCTGGCCACACAGCTC
GCTAGAGCAGTGCAGGCACTGTGCAGGTTGAGTGTCGCCCGGGCAAGGCTCTGTGCCGAG
AGATTTGCTGATGCTGAGCTTCGGGATAAGCTTACTGCTGGCATTAGCGTCGATGATTTG
AGGGGGATGCTTGACAAGGTTTTGATTGATTCAGATGCTGTGTCAGTCTTGAAGGGGGTG
TACAACCACTTGCTCAAGTTCAGGGACTTTCTCTCCTGGGAAGCAGCTATGGCCATGGCA
GTAATTGAAACAGACAGTTCAATTGAGAAGCCGCAATCTGCTGTTGACAACGAAGCAGCT
GGTTCAAGTGAAAAGGCACAGGCTGGTGGGGACAAAGCAAAGGGTGACAAGAAGAGCAAG
AAGAAGAAAACTTTGGGGAAGGGTACATCTGCTGTGCTGATGCTGCTTAGGGACCATGTG
ACAAATGGAAGTACTGTTGCTTCCGTGAATTCTGTGCTTGTTGCAGAGTGGGCAGCCTCT
CTCTCATTGCTCTTTGATCCTAAATGTCCCGGATTGGTGTCCCTTGTGGAGAAAGTGAAG
GAGATTGTTGAGAGCAATGAAGTCAGGAGATTGCCTAAAATTCCTAAGGGTACACGTGAC
TTTGGGAAAGAGCAAATGGCGATAAGAGAGCGAGCATTTTCAATTATAACTAGTGTATTC
AAGATGCACGGTGCTACTGCACTTGATACCCCTGTATTTGAGCTGAGAGAAACCCTTATG
GGAAAATATGGTGAAGACTCAAAATTGATATATGACCTGGCTGATCAGGGTGGTGAGCTT
TGCTCTTTGCGTTATGATCTGACTGTTCCATTTGCCCGGTACGTTGCCATGAATAGCATA
AGCGCACTGAAGAGATACCAGATTGCAAAAGTATATAGGAGAGATAATCCATCAAAGGGA
AGGTACCGAGAATTCTACCAATGTGATTTCGACATTGCTGGTGTATATGAACCTATGGAA
CCGGATTTTGAGGTCATCAAAGTTTTGACTGAGTTGCTGAATCAACTGGATATAGGCACG
TATGAGATAAAATTAAATCACAGAAAGTTGCTGGATGGAATGTTGGAGATTTGTGGTGTG
CCTCCTCAAAAGTTCAGAACCGTTTGCTCGAGTATTGACAAGCTGGACAAGCAAACATTC
GAACAGGTGAAGAAAGAACTGGTGGATGAGAAAGGTATATCAAATGAAACTGCAGATGAA
ATTGGCAATTTAGTGAAGACTAGAGGAGCCCCCTTGGAAGTTTTGATGGAGTTGAGAAAG
GATAGCAGCAAGTTTATGAATAATGAAGGGTCTGTTGCTGCACTGAATGAGCTGGAGATA
TTATTCAAGGCTCTGGATAAAGCAAATGCAATAGACAAGATAGTTTTTGATTTAAGTTTG
GCCAGGGGGCTTGATTACTACACTGGTGTTATATATGAAGCCGTTTTTAAGGGTTCAGCT
CAGGTTGGCTCCATTGCAGCTGGTGGTCGGTACGACAACCTTGTGGGTATGTTCAGCGGG
AAGCAAATCCCCGCTGTTGGTGTGAGCCTTGGAATTGAGAGAGTCTTTGCAATCATGGAG
CAACAGGAGAAAGAAAGAAATGAGAAGATCCGGCCTACAGAGACACAGGTGCTGGTGTCA
ATCCTGGGAAAGGACCTTACACTAGCTGCAGAGCTCGCGAGCGAGCTGTGGAATGCTGGG
TTAAAGGCAGAATTCAAGCTCACTACTAGGGTGGCGAACCACATCAAGTATGCCTTGCAA
TCAGGCATTCCGTGGATGGTGCTAGTCGGTGAGTCTGAGTTGCAGAAGGGAAGTGTTAAA
TTGAAGGATGTTGAAGCCAACCAGGAAGAAGAGGTTGATAGGAAGGATTTTGTTCAAGAG
CTGAAGAAGAGATTGAGTAAACCCAACATTCATTTGAGGCAAAATCAATTACGGCAGAGG
CGGAGAATGATACTGCAGCATTGTAGTTTAAAGTGCTGGGGATGTTTTTGTTAGATTACC
CGTCTAGGGTTTGGTGTCTTCCCCATGTAATTACCTTCTCACCCCTTTGTAATGGACCAG
CCCCAATTACCTAAGT