Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010842_T027
CDS Infomation	cds chromosome:B73_RefGen_v4:8:129923624:129926378:-1 gene:Zm00001d010842 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2H2-transcription factor 21 description:Pentatricopeptide repeat-containing protein
Sequence	ATGAATAGAAGCATTTGCCACCACCTCCTTGCCCACTGCAAAAAGCTAAGAGAGCTCCAG AGAATCCACGCTCTGGCTGTTACCCATGGTCTCCACCCCAACCATCAGTCTGTTTCCTGC AAAATCTTCCGCTGCTACGCTGATTTTGGCCATGTAGCTGATGCTCGCAAGCTGTTCGAT GAGATCCCACACCCTGACCTTATCTTCTTTACTAGCCTCATGTCCCTCCATCTCAAGTTA GATCACCAACGCGAAGCTATATCCTTGTTTGCTCGTGTTGTTGCCGCTGGCCACCACCTT GATGGCTTTGCGGTTGTTGGTGCCCTGTCTGCCTCTAGTGGTGCTGGTGATCTAGTGGTT GGTAGGGCAGTCCATGGCCTTATTTTTCGGCTTGGATTGGATCACGAGGTCGTCGTTGGC AATGCATTAATAGATATGTATAGCCAGTGTGGGGAGTTTGAGTCTGCGGTAAAGGTGTTT GATAGGATGTTTCTGAAAGATGAGGTCACATGGGGTAGCATGCTGCATGGTCATATCAAA TGTGCTGGTCTGGATTCTGCACTGTCGTTCTTTGATCTGGTTCCTGTGAGGAGTGCAGTT GCTTGGACAACACTGATAACTGGTCATGTGCAAGGCAGGCAGCCTGTACGGGCTCTAGAG CTTTTTGGTAGGATGGTACTGGAGGGCCATCGCCCTACCCATGTTACAATCGTAGGTGTA CTCTCAGCTTGTGCTGACATTGGTGCTCTGGATCTAGGGAGTGTCATTCATGGGTATGGA AGCAAATGCAATGCCAGCTCGAATATAATTGTTAGCAATGCTCTGATGGATATGTATGCA AAGAGTGGGCGCATTGAGATGTCATTTTCTGTGTTCCAAGAAATCCAGTCAAAGGATTTT TTTACATGGACGACTATGATCTCATGCTGTACAGTCCAGGGAGATGGGAGGAAAGCTCTT GAGCTCTTTCAGGACATGCTTAGAGCTGGAATAGTTCCAAACAGTGTAACCTTTGTTTCT GTTTTGTCAGCATGCAGCCATGCTGGCTTGATAGAAGAAGGTAGAGAATTGTTCAACAGA ATGCGTCAAGTATACAAAATTGATCCCCGACTTGAGCACTATGGTTGCATGATTGATCTG TTAGGACGGGGAGGATTACTAGAGGAAGCAGAAGATCTAATAGCTGATATGAATCTGGTG CCTGATATTGTTATATGGAGGTCACTTCTTAGTGCATGTCTGGTTCATGGCAATAATAGG CTGGCTGAGATTGCTGGAAAGGAAATTATAAAGATAGAGCCTGGAGATGATGGAGTTTAT GTGCTACTTTGGAACATGTATGCATCATCAAATAAATGGAGAGAAGCTCAAGAGTTGAGG CAGCAAATGTTGACTCTTGAAATCTTCAAAAAACCAGGGTGTAGTTGGATAGAACTTGAT GGTGTTGTCCATGAATTCTTGGTAGAGGACAAGACACATGATGATCGAAGGGAAATTTAT GAAACCTTGGAATACATGACAAGGCAGCTCAAGACACATATCAGATTATCCTCATGGGAG CAACATGGTTCATCCATTTCTGTTGATGAAGAAATCATAGAATCATATACTGCTCATTTG TTGCATGATTGA

Peptide Sequence

PEP ID	Zm00001d010842_P027
PEP Infomation	pep chromosome:B73_RefGen_v4:8:129923624:129926378:-1 gene:Zm00001d010842 transcript:Zm00001d010842_T027 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2H2-transcription factor 21 description:Pentatricopeptide repeat-containing protein
Sequence	MNRSICHHLLAHCKKLRELQRIHALAVTHGLHPNHQSVSCKIFRCYADFGHVADARKLFD EIPHPDLIFFTSLMSLHLKLDHQREAISLFARVVAAGHHLDGFAVVGALSASSGAGDLVV GRAVHGLIFRLGLDHEVVVGNALIDMYSQCGEFESAVKVFDRMFLKDEVTWGSMLHGHIK CAGLDSALSFFDLVPVRSAVAWTTLITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGV LSACADIGALDLGSVIHGYGSKCNASSNIIVSNALMDMYAKSGRIEMSFSVFQEIQSKDF FTWTTMISCCTVQGDGRKALELFQDMLRAGIVPNSVTFVSVLSACSHAGLIEEGRELFNR MRQVYKIDPRLEHYGCMIDLLGRGGLLEEAEDLIADMNLVPDIVIWRSLLSACLVHGNNR LAEIAGKEIIKIEPGDDGVYVLLWNMYASSNKWREAQELRQQMLTLEIFKKPGCSWIELD GVVHEFLVEDKTHDDRREIYETLEYMTRQLKTHIRLSSWEQHGSSISVDEEIIESYTAHL LHD

Transcript Sequence

Transcript ID	Zm00001d010842_T027
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:129923624:129926378:-1 gene:Zm00001d010842 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2H2-transcription factor 21 description:Pentatricopeptide repeat-containing protein
Sequence	ACTCACCACAGGTGCGGCGGCGCACACTGCTGCACACTGCACTCCCTCCGTCCCGCGTCC CCGTTCGGCGCTCTCGGCACGACCGCCGGTAGCCCGGGACGCACGTCGCACGGCCCCATC CCTCCTAGCGGCCGGTGACGGCACCGGCGGCCCTTTGCTCGGCTGTGCCCAAGCTGCGAG GGCGAGATCTACCCCCGCGTCCGTGCATCTTCGTCAGGCCCTTCTCCGGACGAGCACTCA CAGGGTGTCAACATTCAAGGTATCAAGGAACGCAAACCTCCAGATTTTGTTACCTCAAGG AGAAGATACATGAATAGAAGCATTTGCCACCACCTCCTTGCCCACTGCAAAAAGCTAAGA GAGCTCCAGAGAATCCACGCTCTGGCTGTTACCCATGGTCTCCACCCCAACCATCAGTCT GTTTCCTGCAAAATCTTCCGCTGCTACGCTGATTTTGGCCATGTAGCTGATGCTCGCAAG CTGTTCGATGAGATCCCACACCCTGACCTTATCTTCTTTACTAGCCTCATGTCCCTCCAT CTCAAGTTAGATCACCAACGCGAAGCTATATCCTTGTTTGCTCGTGTTGTTGCCGCTGGC CACCACCTTGATGGCTTTGCGGTTGTTGGTGCCCTGTCTGCCTCTAGTGGTGCTGGTGAT CTAGTGGTTGGTAGGGCAGTCCATGGCCTTATTTTTCGGCTTGGATTGGATCACGAGGTC GTCGTTGGCAATGCATTAATAGATATGTATAGCCAGTGTGGGGAGTTTGAGTCTGCGGTA AAGGTGTTTGATAGGATGTTTCTGAAAGATGAGGTCACATGGGGTAGCATGCTGCATGGT CATATCAAATGTGCTGGTCTGGATTCTGCACTGTCGTTCTTTGATCTGGTTCCTGTGAGG AGTGCAGTTGCTTGGACAACACTGATAACTGGTCATGTGCAAGGCAGGCAGCCTGTACGG GCTCTAGAGCTTTTTGGTAGGATGGTACTGGAGGGCCATCGCCCTACCCATGTTACAATC GTAGGTGTACTCTCAGCTTGTGCTGACATTGGTGCTCTGGATCTAGGGAGTGTCATTCAT GGGTATGGAAGCAAATGCAATGCCAGCTCGAATATAATTGTTAGCAATGCTCTGATGGAT ATGTATGCAAAGAGTGGGCGCATTGAGATGTCATTTTCTGTGTTCCAAGAAATCCAGTCA AAGGATTTTTTTACATGGACGACTATGATCTCATGCTGTACAGTCCAGGGAGATGGGAGG AAAGCTCTTGAGCTCTTTCAGGACATGCTTAGAGCTGGAATAGTTCCAAACAGTGTAACC TTTGTTTCTGTTTTGTCAGCATGCAGCCATGCTGGCTTGATAGAAGAAGGTAGAGAATTG TTCAACAGAATGCGTCAAGTATACAAAATTGATCCCCGACTTGAGCACTATGGTTGCATG ATTGATCTGTTAGGACGGGGAGGATTACTAGAGGAAGCAGAAGATCTAATAGCTGATATG AATCTGGTGCCTGATATTGTTATATGGAGGTCACTTCTTAGTGCATGTCTGGTTCATGGC AATAATAGGCTGGCTGAGATTGCTGGAAAGGAAATTATAAAGATAGAGCCTGGAGATGAT GGAGTTTATGTGCTACTTTGGAACATGTATGCATCATCAAATAAATGGAGAGAAGCTCAA GAGTTGAGGCAGCAAATGTTGACTCTTGAAATCTTCAAAAAACCAGGGTGTAGTTGGATA GAACTTGATGGTGTTGTCCATGAATTCTTGGTAGAGGACAAGACACATGATGATCGAAGG GAAATTTATGAAACCTTGGAATACATGACAAGGCAGCTCAAGACACATATCAGATTATCC TCATGGGAGCAACATGGTTCATCCATTTCTGTTGATGAAGAAATCATAGAATCATATACT GCTCATTTGTTGCATGATTGATTCACATGAGTCTTCCCATTAAATAGCCTTTTTTGTGCC GAAATCAAATTCGATGATCTCATTGTAATTTATTTATTATTAGTCTTATCTTGCAGCGTC TCTAGATCAAGATTATAGTGTAGAAATCCACTGCTGTAAGTTGGTGGCAAGAAATTATTA GATATATGTTGAGGTTGGTTTTACTTTTACCAGTCACTTAATAAAGGTTTTAGTTG