Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010821_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:8:128736706:128743522:1 gene:Zm00001d010821 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch synthase4 description: starch synthase4
Sequence	ATGGAGCATTATGCAGAAGGCATGCCATCAGAGTTCTGGAGTAGGATCTCTCTTCTGATT GATGGGTGGTCGCTTGAGAAGAAAATATCCATTAATGATGCAAGTATGTTGAGAGAAATG GCTTGGAAAAGGGATAATCGCCTCCGGGAAGCTTACTTGTCATCCAGAGGAATGGAAGAG AGGGAACTGATAGATAGTTTTCTAAAGATGGCACTACCAGGAACAAGTTCTGGTTTGCAC ATTGTCCACATAGCAGCAGAGATGGCTCCTGTCGCAAAGGTTGGTGGTCTGGCAGATGTG ATCTCTGGTCTTGGGAAGGCACTTCAAAAAAAGGGGCACCTTGTAGAGATTATTCTTCCC AAATATGATTGCATGCAGCATAACCAAATAAATAATCTTAAGGTTCTAGATGTTGTGGTG AAGTCTTACTTTGAAGGAAATATGTTTGCCAACAAGATATGGACTGGAACTGTTGAAGGT CTTCCGGTCTACTTTATTGAACCGCAACATCCAGGTAAGTTCTTCTGGAGGGCACAATAC TACGGAGAGCATGATGACTTCAAACGTTTTTCGTACTTTAGCCGTGTTGCACTGGAATTG CTTTACCAATCTGGGAAGAAAGTTGACATAATTCACTGCCATGACTGGCAGACTGCATTT GTTGCACCTCTTTACTGGGATGTATATGCAAACCTGGGCTTCAACTCAGCTAGAATTTGT TTTACCTGTCACAATTTTGAATATCAAGGAATCGCTCCAGCTCAGGACTTAGCATATTGT GGTCTTGATGTTGATCACCTGGATAGACCAGACAGAATGCGGGATAATTCACATGGCAGA ATAAATGTTGTTAAGGGTGCAGTTGTATATTCCAACATTGTGACAACTGTATCACCAACA TATGCACAAGAGGTTCGCTCAGAGGGTGGGCGTGGGCTCCAAGATACACTCAAAGTGCAC TCCAAGAAATTTGTTGGAATACTTAATGGCATTGACACAGATACTTGGAATCCGTCTACG GATAGGTTTCTCAAGGTTCAATACAGTGCTAATGATCTATATGGAAAGTCAGCAAACAAA GCAGCTCTTAGGAAGCAGTTGAAGCTTGCTTCCACACAAGCTTCTCAACCATTAGTTGGT TGCATTACGAGGCTAGTTCCTCAAAAGGGTGTACATCTCATCAGGCATGCAATATATAAA ATAACTGAGTTGGGTGGTCAATTTGTTCTGCTGGGTTCAAGTCCAGTACAGCATATCCAG AGAGAGTTCGAGGGTATTGCGGACCAATTTCAGAACAACAACAATGTCAGGCTGCTTTTG AAGTATGATGATGCTCTGGCACATATGATCTTTGCAGCATCAGACATGTTCATTGTTCCT TCTATGTTTGAACCATGTGGCCTCACTCAGATGGTAGCTATGCGATATGGTTCTGTGCCA GTTGTTCGGAGAACCGGCGGTTTGAATGACAGTGTCTTCGATTTGGACGATGAAACGATA CCCATGGAGGTGCGAAATGGCTTCACCTTTTTGAAGGCTGATGAGCAGGATTTTGGTAAT GCACTGGAAAGAGCTTTCAACTACTACCACAGAAAACCTGAAGTTTGGAAACAGTTGGTG CAGAAAGACATGAAGATAGATTTCAGCTGGGATACTTCAGTTTCTCAATACGAAGAAATC TATCAGAAAACAGCCACTCGAGCCAGGGCAGCGGCATAA

Peptide Sequence

PEP ID	Zm00001d010821_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:8:128736706:128743522:1 gene:Zm00001d010821 transcript:Zm00001d010821_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch synthase4 description: starch synthase4
Sequence	MEHYAEGMPSEFWSRISLLIDGWSLEKKISINDASMLREMAWKRDNRLREAYLSSRGMEE RELIDSFLKMALPGTSSGLHIVHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILP KYDCMQHNQINNLKVLDVVVKSYFEGNMFANKIWTGTVEGLPVYFIEPQHPGKFFWRAQY YGEHDDFKRFSYFSRVALELLYQSGKKVDIIHCHDWQTAFVAPLYWDVYANLGFNSARIC FTCHNFEYQGIAPAQDLAYCGLDVDHLDRPDRMRDNSHGRINVVKGAVVYSNIVTTVSPT YAQEVRSEGGRGLQDTLKVHSKKFVGILNGIDTDTWNPSTDRFLKVQYSANDLYGKSANK AALRKQLKLASTQASQPLVGCITRLVPQKGVHLIRHAIYKITELGGQFVLLGSSPVQHIQ REFEGIADQFQNNNNVRLLLKYDDALAHMIFAASDMFIVPSMFEPCGLTQMVAMRYGSVP VVRRTGGLNDSVFDLDDETIPMEVRNGFTFLKADEQDFGNALERAFNYYHRKPEVWKQLV QKDMKIDFSWDTSVSQYEEIYQKTATRARAAA

Transcript Sequence

Transcript ID	Zm00001d010821_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:128736706:128743522:1 gene:Zm00001d010821 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch synthase4 description: starch synthase4
Sequence	CACTCAATAGTGGAGTTTCATGGTACTCTCAGCAAACTAATAAATGAAAGTGAGAAAAAG TCAATGGAGCATTATGCAGAAGGCATGCCATCAGAGTTCTGGAGTAGGATCTCTCTTCTG ATTGATGGGTGGTCGCTTGAGAAGAAAATATCCATTAATGATGCAAGTATGTTGAGAGAA ATGGCTTGGAAAAGGGATAATCGCCTCCGGGAAGCTTACTTGTCATCCAGAGGAATGGAA GAGAGGGAACTGATAGATAGTTTTCTAAAGATGGCACTACCAGGAACAAGTTCTGGTTTG CACATTGTCCACATAGCAGCAGAGATGGCTCCTGTCGCAAAGGTTGGTGGTCTGGCAGAT GTGATCTCTGGTCTTGGGAAGGCACTTCAAAAAAAGGGGCACCTTGTAGAGATTATTCTT CCCAAATATGATTGCATGCAGCATAACCAAATAAATAATCTTAAGGTTCTAGATGTTGTG GTGAAGTCTTACTTTGAAGGAAATATGTTTGCCAACAAGATATGGACTGGAACTGTTGAA GGTCTTCCGGTCTACTTTATTGAACCGCAACATCCAGGTAAGTTCTTCTGGAGGGCACAA TACTACGGAGAGCATGATGACTTCAAACGTTTTTCGTACTTTAGCCGTGTTGCACTGGAA TTGCTTTACCAATCTGGGAAGAAAGTTGACATAATTCACTGCCATGACTGGCAGACTGCA TTTGTTGCACCTCTTTACTGGGATGTATATGCAAACCTGGGCTTCAACTCAGCTAGAATT TGTTTTACCTGTCACAATTTTGAATATCAAGGAATCGCTCCAGCTCAGGACTTAGCATAT TGTGGTCTTGATGTTGATCACCTGGATAGACCAGACAGAATGCGGGATAATTCACATGGC AGAATAAATGTTGTTAAGGGTGCAGTTGTATATTCCAACATTGTGACAACTGTATCACCA ACATATGCACAAGAGGTTCGCTCAGAGGGTGGGCGTGGGCTCCAAGATACACTCAAAGTG CACTCCAAGAAATTTGTTGGAATACTTAATGGCATTGACACAGATACTTGGAATCCGTCT ACGGATAGGTTTCTCAAGGTTCAATACAGTGCTAATGATCTATATGGAAAGTCAGCAAAC AAAGCAGCTCTTAGGAAGCAGTTGAAGCTTGCTTCCACACAAGCTTCTCAACCATTAGTT GGTTGCATTACGAGGCTAGTTCCTCAAAAGGGTGTACATCTCATCAGGCATGCAATATAT AAAATAACTGAGTTGGGTGGTCAATTTGTTCTGCTGGGTTCAAGTCCAGTACAGCATATC CAGAGAGAGTTCGAGGGTATTGCGGACCAATTTCAGAACAACAACAATGTCAGGCTGCTT TTGAAGTATGATGATGCTCTGGCACATATGATCTTTGCAGCATCAGACATGTTCATTGTT CCTTCTATGTTTGAACCATGTGGCCTCACTCAGATGGTAGCTATGCGATATGGTTCTGTG CCAGTTGTTCGGAGAACCGGCGGTTTGAATGACAGTGTCTTCGATTTGGACGATGAAACG ATACCCATGGAGGTGCGAAATGGCTTCACCTTTTTGAAGGCTGATGAGCAGGATTTTGGT AATGCACTGGAAAGAGCTTTCAACTACTACCACAGAAAACCTGAAGTTTGGAAACAGTTG GTGCAGAAAGACATGAAGATAGATTTCAGCTGGGATACTTCAGTTTCTCAATACGAAGAA ATCTATCAGAAAACAGCCACTCGAGCCAGGGCAGCGGCATAAACAGCAGAGACATTGAGA CAGTTCCCTGCTGTCTCCATGAAGTCTCCTAGATGCTGTGCTTAACCGTATGGTAAAGAA ATATGGTCTGTATCAGCTCAGAATTAAGCATCTGCCGAGGAAGCGCGGTGCATCCGGACT CGGGTGTACAAGGGGCGACGTGGCGTTACGTGCAGTCCCCAACGAAGCAAAGAGACAGAA GTACAGCTGTACAGAACGGATATCTTGTGAAGCACACATTGGGATCAGGACGTTTGGTGC TGCAGCTACTTTCGGTGCAGAAGCACATATATACGAGACCTGCCAGGGCGAGCAAATACC CAGTTATACACGCGATTGCTCAGCTCTATCAAGCTGTGAATTGAAAGATTTCTATAGTGT ATTCACGCGACGTTTTCATAAACTAGTGTGAGTTATGTACTCTGACCAGTGACCAGTGCG AAGTCTGTGTTGTCTCAACAATGTTGCTTGGTATAAAATGCTAAAATGACGTTTAAGACG AGAGGGGTTTT