Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010800_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:128212334:128215465:-1 gene:Zm00001d010800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 54
Sequence	ATGGCGGCCGCCGGGGCGTCGAGGAGCGCGGAGGAGGGCAAGAGCGACCAAACGAGGCCC CTCGCGCTGCCTTCCCCAACAGTCTACCCGGCGCCGTCGGCCAGCGACGCCGCCGCCAGG GCCAGGTGGCGGTCCACGCAGTACCTCCGCAAGCGCCGGTGCGCGCTCTGCTGCGGCGGC TGCTGCGTGAGCGCCATCGTGGTCGTCGGCGTCATCATCCTGGCGCTGGCGCTCACCGTG TTCAGGGTCAAGCAGCCGCGCCTGGCCGTCAACAACGTCTGGCTCACGGCCATCAGCGCC GGGCCCGGGACGGGGCCGGGGGCCGCCGCCCCCGTGGCCGCCAACGCCACGCTCACCGCC GACGTCTCCGTGGACAACCCCAACGCCGCGGCGTTCAGGTTCTCGCGGACCGAGACGGAC GTCTACTACGAGGGCCGGACGGTGAGCGTGGCGTACGCGCCCGCCGGCCGCGTCGGCGCG CGCGGGAGCGTCCGGATGAACGTCACGGTCGACCTCCTCGCCGACCGCCTCGCGCGCGCC GTCAACGGCACCGGCCTCGTGTTCGGCCAGGAGTACCAACTCCACACCTACACGGCGATC AACGGCACGGTCAATGTGCTGGGGATCGTCAAGAAGCACATCCAGATCAGGCTCAACTGC TCCACCGTCATCCAGTCCTCTCTTTCCCCGGCACCACCACCACCCAGGCTAACCGGACTG GACCGAGTGTTGAACAACACTGAGGGCGAGGCAGATAGAGCGACGGCAGGCATGGTGAGC CGTGAAAATTTGCACCTGGTGCTGGACCCGGCGTCTCTGGGCGCGCCGTGGGCCGACCCG TCCGCCGCAGAGATCCCGCCGCAGCTCCTCGCCGCGCTGGGAGAGTACCTCTCCTCCACC CGCGCCGAGGGCGGCGACGTCGCGACGGAGGCGGACGACGAGTTCATGATGCACGAGTTC AAGGTGCGGCGGTGCGCGCGCGCGCGGAGCCACGACTGGACGGCGTGCCCCTACGCGCAC CCGGGGGAGGCCGCGCGGCGGCGGGACCCGCGCCGCGTGGCCTACGCGGGGGAGCCGTGC CCGGACTTCCGGCGCCGCCCGGGCGCGGGCGCCGCGTGCCCGCGCGGGGCCGCCTGCCCG CTCGCGCACGGCACCTTCGAGCTGTGGCTCCACCCGTCCCGCTACCGCACGCGCCCCTGC CGCGCGGGCGCTGCCTGCCGCCGCCGCGTCTGCTTCTTCGCGCACGCCGCGGCCGAGCTC CGCGCCGGCGCCGGCGCCGGCGCCGGCGCCGCCAAGGACGGCTGCTCGCCGCTCGCGCTG TCGCTCTCGCCCAAGTCGACGCTGGCGCCGCCCTGGGAGTCGCCGCCGGTGTCGCCGGTG GAGGGCCGGAGGTGGGTCGACGAGCCGGCGGACGCCGAGGTGGAGGAGCTGTTGCTCGCG ATGCGGGAGCTCGGATTCAGGAAGGCCAAGGCGTCGTCGTCGGCGCCGGTCCTGCCTGCG GCTGCGGTCACGGAGGACGACGGGCCGGACTTGGGATGGGTGTCGGAGCTGGTGATGTAG

Peptide Sequence

PEP ID	Zm00001d010800_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:128212334:128215465:-1 gene:Zm00001d010800 transcript:Zm00001d010800_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 54
Sequence	MAAAGASRSAEEGKSDQTRPLALPSPTVYPAPSASDAAARARWRSTQYLRKRRCALCCGG CCVSAIVVVGVIILALALTVFRVKQPRLAVNNVWLTAISAGPGTGPGAAAPVAANATLTA DVSVDNPNAAAFRFSRTETDVYYEGRTVSVAYAPAGRVGARGSVRMNVTVDLLADRLARA VNGTGLVFGQEYQLHTYTAINGTVNVLGIVKKHIQIRLNCSTVIQSSLSPAPPPPRLTGL DRVLNNTEGEADRATAGMVSRENLHLVLDPASLGAPWADPSAAEIPPQLLAALGEYLSST RAEGGDVATEADDEFMMHEFKVRRCARARSHDWTACPYAHPGEAARRRDPRRVAYAGEPC PDFRRRPGAGAACPRGAACPLAHGTFELWLHPSRYRTRPCRAGAACRRRVCFFAHAAAEL RAGAGAGAGAAKDGCSPLALSLSPKSTLAPPWESPPVSPVEGRRWVDEPADAEVEELLLA MRELGFRKAKASSSAPVLPAAAVTEDDGPDLGWVSELVM

Transcript Sequence

Transcript ID	Zm00001d010800_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:128212334:128215465:-1 gene:Zm00001d010800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 54
Sequence	ATGGCGGCCGCCGGGGCGTCGAGGAGCGCGGAGGAGGGCAAGAGCGACCAAACGAGGCCC CTCGCGCTGCCTTCCCCAACAGTCTACCCGGCGCCGTCGGCCAGCGACGCCGCCGCCAGG GCCAGGTGGCGGTCCACGCAGTACCTCCGCAAGCGCCGGTGCGCGCTCTGCTGCGGCGGC TGCTGCGTGAGCGCCATCGTGGTCGTCGGCGTCATCATCCTGGCGCTGGCGCTCACCGTG TTCAGGGTCAAGCAGCCGCGCCTGGCCGTCAACAACGTCTGGCTCACGGCCATCAGCGCC GGGCCCGGGACGGGGCCGGGGGCCGCCGCCCCCGTGGCCGCCAACGCCACGCTCACCGCC GACGTCTCCGTGGACAACCCCAACGCCGCGGCGTTCAGGTTCTCGCGGACCGAGACGGAC GTCTACTACGAGGGCCGGACGGTGAGCGTGGCGTACGCGCCCGCCGGCCGCGTCGGCGCG CGCGGGAGCGTCCGGATGAACGTCACGGTCGACCTCCTCGCCGACCGCCTCGCGCGCGCC GTCAACGGCACCGGCCTCGTGTTCGGCCAGGAGTACCAACTCCACACCTACACGGCGATC AACGGCACGGTCAATGTGCTGGGGATCGTCAAGAAGCACATCCAGATCAGGCTCAACTGC TCCACCGTCATCCAGTCCTCTCTTTCCCCGGCACCACCACCACCCAGGCTAACCGGACTG GACCGAGTGTTGAACAACACTGAGGGCGAGGCAGATAGAGCGACGGCAGGCATGGTGAGC CGTGAAAATTTGCACCTGGTGCTGGACCCGGCGTCTCTGGGCGCGCCGTGGGCCGACCCG TCCGCCGCAGAGATCCCGCCGCAGCTCCTCGCCGCGCTGGGAGAGTACCTCTCCTCCACC CGCGCCGAGGGCGGCGACGTCGCGACGGAGGCGGACGACGAGTTCATGATGCACGAGTTC AAGGTGCGGCGGTGCGCGCGCGCGCGGAGCCACGACTGGACGGCGTGCCCCTACGCGCAC CCGGGGGAGGCCGCGCGGCGGCGGGACCCGCGCCGCGTGGCCTACGCGGGGGAGCCGTGC CCGGACTTCCGGCGCCGCCCGGGCGCGGGCGCCGCGTGCCCGCGCGGGGCCGCCTGCCCG CTCGCGCACGGCACCTTCGAGCTGTGGCTCCACCCGTCCCGCTACCGCACGCGCCCCTGC CGCGCGGGCGCTGCCTGCCGCCGCCGCGTCTGCTTCTTCGCGCACGCCGCGGCCGAGCTC CGCGCCGGCGCCGGCGCCGGCGCCGGCGCCGCCAAGGACGGCTGCTCGCCGCTCGCGCTG TCGCTCTCGCCCAAGTCGACGCTGGCGCCGCCCTGGGAGTCGCCGCCGGTGTCGCCGGTG GAGGGCCGGAGGTGGGTCGACGAGCCGGCGGACGCCGAGGTGGAGGAGCTGTTGCTCGCG ATGCGGGAGCTCGGATTCAGGAAGGCCAAGGCGTCGTCGTCGGCGCCGGTCCTGCCTGCG GCTGCGGTCACGGAGGACGACGGGCCGGACTTGGGATGGGTGTCGGAGCTGGTGATGTAG