Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010758_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:8:127176772:127183341:1 gene:Zm00001d010758 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:homeobox1 description: homeobox1
Sequence

ATGGGAGATGAAGGATGGCTCTGCCCAGCATGTGATTGCAAGATAGATTGTATAGATCTA
ATAAATGAACTCCATGGGAGTAACATCTCCATTGAGGACTCTTGGGAGAAAGTTTTTCCA
GATGCAGCTGCTATGGCAAATGACTCTAAACAAGATGACGCATTTGATCTTCCATCAGAT
GACTCAGACGACAATGACTTTGACCCCAATATGCCTGAAGAGCATGTGGTTGGTAAGGAT
GAAGAATCGTCTGAAGAGGATGAGGATGGAGGATCAGACTCTGATGACTCAGACTTTTTG
ACATGTTCTGATGATTCGGAACCTTTGATAGACAAGAAGGTTGATGACCTCAGATTACCT
TCTGAAGATTCAGAGGATGATGACTATGATCCAGCAGGTCCTGATTCAGATAAAGATGTC
GAAAAGAAGTCAAGTTCTGATGAATCTGACTTCACATCTGACTCAGATGATTTTTGTAAG
GAGATTTCAAAATCTGGACATGATGAAGTTTCATCACCTCTATTACCCGATGCCAAGGTG
GGTGATATGGAAAAGATTACTGCTCAAGCTAAAACAACAAGTTCTGCTGACGACCCTATG
GAGACTGAAATAGACCAGGGTGTGGTTTTACCAGATTCAAGGAGACGGCAAGCTGAACGG
TTGGACTACAAAAAGTTGTATGATGAGGCATATGGTGAAGCATCATCTGATTCTAGTGAT
GATGAAGAATGGTCTGGGAAGAACACGCCAATAATAAAAAGCAATGAAGAGGGTGAAGCC
AATTCTCCTGCGGGAAAAGGCTCCAGAGTTGTGCACCATAATGATGAACTGACTACACAA
AGCACTAAAAAAAGCTTGCATTCTATTCATGGTTCAGTAGATGAGAAACCTGGAGACCTT
ACTTCTAATGGCAGCAACAGCACAGCCAGGAAAGGACATTTTGGCCCAGTAATTAATCAG
AAGCTACATGAACATTTTAAGACACAACCATACCCTAGTCGTTCTGTTAAAGAAAGTCTG
GCAGAAGAACTAGGGTTAACATTTCGTCAGGTTAACAAATGGTTTGAAACTAGGCGTCAT
TCCGCAAGGGTAGCTTCTTCCAGGAAAGGCATCAGTCTAGATAAGCATAGCCCCCAAAAT
ACTAATAGTCAAGTGACAGCTAGTATGGAACCTAAAGAACCTGAGGGGACTGTGGTGGAA
GAATCTAATGTATGCCTAAATGGGGGTACTACCATCTCTAAAGAAGCAGTGTCTTCAAAA
GTTGGATCAAGAACCCCTGGAAGTGATGTGGGAGGGTCAAAAGTTGATTCTGCTGAGGAT
CAGAATCCGGGGCCTGATCTTGCAGAGAAGGCAAGGCAAAAGGCAATACAGCAGGAGTTG
AGGAAGAAAAAAATGGGACGATGA

Peptide Sequence

PEP ID

Zm00001d010758_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:8:127176772:127183341:1 gene:Zm00001d010758 transcript:Zm00001d010758_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:homeobox1 description: homeobox1
Sequence

MGDEGWLCPACDCKIDCIDLINELHGSNISIEDSWEKVFPDAAAMANDSKQDDAFDLPSD
DSDDNDFDPNMPEEHVVGKDEESSEEDEDGGSDSDDSDFLTCSDDSEPLIDKKVDDLRLP
SEDSEDDDYDPAGPDSDKDVEKKSSSDESDFTSDSDDFCKEISKSGHDEVSSPLLPDAKV
GDMEKITAQAKTTSSADDPMETEIDQGVVLPDSRRRQAERLDYKKLYDEAYGEASSDSSD
DEEWSGKNTPIIKSNEEGEANSPAGKGSRVVHHNDELTTQSTKKSLHSIHGSVDEKPGDL
TSNGSNSTARKGHFGPVINQKLHEHFKTQPYPSRSVKESLAEELGLTFRQVNKWFETRRH
SARVASSRKGISLDKHSPQNTNSQVTASMEPKEPEGTVVEESNVCLNGGTTISKEAVSSK
VGSRTPGSDVGGSKVDSAEDQNPGPDLAEKARQKAIQQELRKKKMGR

Transcript Sequence

Transcript ID

Zm00001d010758_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:127176772:127183341:1 gene:Zm00001d010758 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:homeobox1 description: homeobox1
Sequence

GGGGAAAATTGACGAAACTTTATTTGATTCTGAAGGAGAAATATCTTGCGAAGATATCTT
TTGTTCCACTTGTGGTTCGAATGACGCTACATTGGGTAATGATATCATTCTCTGCGATGG
AGCTTGTGACAGAGGGTTCCACCAGAACTGTTTAAATCCTCCCCTGCGTACTGAAGATAT
CCCCATGGGAGATGAAGGATGGCTCTGCCCAGCATGTGATTGCAAGATAGATTGTATAGA
TCTAATAAATGAACTCCATGGGAGTAACATCTCCATTGAGGACTCTTGGGAGAAAGTTTT
TCCAGATGCAGCTGCTATGGCAAATGACTCTAAACAAGATGACGCATTTGATCTTCCATC
AGATGACTCAGACGACAATGACTTTGACCCCAATATGCCTGAAGAGCATGTGGTTGGTAA
GGATGAAGAATCGTCTGAAGAGGATGAGGATGGAGGATCAGACTCTGATGACTCAGACTT
TTTGACATGTTCTGATGATTCGGAACCTTTGATAGACAAGAAGGTTGATGACCTCAGATT
ACCTTCTGAAGATTCAGAGGATGATGACTATGATCCAGCAGGTCCTGATTCAGATAAAGA
TGTCGAAAAGAAGTCAAGTTCTGATGAATCTGACTTCACATCTGACTCAGATGATTTTTG
TAAGGAGATTTCAAAATCTGGACATGATGAAGTTTCATCACCTCTATTACCCGATGCCAA
GGTGGGTGATATGGAAAAGATTACTGCTCAAGCTAAAACAACAAGTTCTGCTGACGACCC
TATGGAGACTGAAATAGACCAGGGTGTGGTTTTACCAGATTCAAGGAGACGGCAAGCTGA
ACGGTTGGACTACAAAAAGTTGTATGATGAGGCATATGGTGAAGCATCATCTGATTCTAG
TGATGATGAAGAATGGTCTGGGAAGAACACGCCAATAATAAAAAGCAATGAAGAGGGTGA
AGCCAATTCTCCTGCGGGAAAAGGCTCCAGAGTTGTGCACCATAATGATGAACTGACTAC
ACAAAGCACTAAAAAAAGCTTGCATTCTATTCATGGTTCAGTAGATGAGAAACCTGGAGA
CCTTACTTCTAATGGCAGCAACAGCACAGCCAGGAAAGGACATTTTGGCCCAGTAATTAA
TCAGAAGCTACATGAACATTTTAAGACACAACCATACCCTAGTCGTTCTGTTAAAGAAAG
TCTGGCAGAAGAACTAGGGTTAACATTTCGTCAGGTTAACAAATGGTTTGAAACTAGGCG
TCATTCCGCAAGGGTAGCTTCTTCCAGGAAAGGCATCAGTCTAGATAAGCATAGCCCCCA
AAATACTAATAGTCAAGTGACAGCTAGTATGGAACCTAAAGAACCTGAGGGGACTGTGGT
GGAAGAATCTAATGTATGCCTAAATGGGGGTACTACCATCTCTAAAGAAGCAGTGTCTTC
AAAAGTTGGATCAAGAACCCCTGGAAGTGATGTGGGAGGGTCAAAAGTTGATTCTGCTGA
GGATCAGAATCCGGGGCCTGATCTTGCAGAGAAGGCAAGGCAAAAGGCAATACAGCAGGA
GTTGAGGAAGAAAAAAATGGGACGATGAAGTTTGTAGACAAAGATATGAGCCAGAATTTG
GACTGCTCCTGAAATTTCCAGGTGCTATGGACCTTGAAACTTTGGCTTTGTATGGCTCTA
TGTCGGCAGCCAAAAAACATAGATATACCATTACAACTTTACAAGTCAGCTAGCTCTCAT
TAGTTCGTGCCAGTCAACTAGCAAGCGCATCATTCAGTTTTTTTTTGTGGGGCCATTGCT
TTCCGTTCTTAGGCAACTGAGAGCTTCCTCTGATTTCTGGGGCGCTCTATAGGAATTAGT
TATCCTTCAGATTTGTTTGCAGCGACTCCTGGCATTGCAAAAGCGTACGGCTCCGTAACG
ACAGCAGTGTACTGCAGAAGATGTGTGTTGTTTTCATCGATGTTGAATTTTCTGGTAAGA
TGGAATGTTG