Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010755_T025
CDS Infomation	cds chromosome:B73_RefGen_v4:8:126969688:126978061:1 gene:Zm00001d010755 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase1 description: trehalose-6-phosphate synthase1
Sequence	ATGCCAACCTCATCGCCCTTTGTCGGCGACAGCGGCGGCGCGGGCTCCCCGATCCGCGTC GAGCGAATGGTCCGCGAGCGTAGCCGCCGCTACGACATCTTCGCGTCGGACGCGATGGAT ACCGACGCCGAGGCGGCCTTCGCGCTGGATGGGGTCCAGTCGCCTGGACGTGCGTCACCC GCCAACATGGAGGATGCTGGCGGCGCGGCCGCAGCGCGACCGCCGCTCGCCGGCTCCCGC AGCGGTTTCCGCCGCCTAGGCCTCCGTGGCATGAAGCAGCGCCTCCTCGTCGTGGCCAAC CGCCTGCCTGTATCCGCCAACCGCCGCGGAGAGGACCACTGGTCGCTTGAGATCAGCGCC GGCGGCCTTGTGAGCGCCCTCCTTGGCGTGAAGGACGTCGACGCGAAGTGGATTGGCTGG GCAGGCGTCAACGTACCGGACGAGGTTGGTCAGCGAGCCCTCACTAAAGCTCTTGCGGAG AAGAGATGCATACCAGTGTTCCTGGACGAGGAGATTGTGCACCAGTACTACAATGGATAC TGCAACAACATCCTGTGGCCACTGTTCCACTACCTAGGACTACCACAGGAGGACAGGCTG GCAACAACGAGGAACTTTGAGTCACAGTTCGACGCGTACAAGCGTGCTAACCAGATGTTC GCTGATGTCGTGTACGAGCACTACCAGGACGGGGATGTGATCTGGTGCCATGACTACCAC CTCATGTTTCTGCCCAAGTGCCTCAAGGACCATGACATCAATATGAAGGTCGGGTGGTTC CTGCACACGCCGTTCCCGTCATCAGAGATTTACCGGACACTGCCGTCCCGCTTGGAGCTG CTTCGGTCGGTGCTGTGTGCCGATTTAGTTGGATTTCATACTTACGACTATGCGAGGCAT TTTGTGAGTGCTTGCACTAGAATACTTGGACTTGAGGGTACCCCTGAGGGCGTTGAAGAT CAAGGAAGGCTAACCAGGGTTGCAGCGTTTCCTATTGGGATAGACTCTGATCGTTTCAAG CGAGCATTGGAGCTTCCAGCAGTGAAAAGGCACGTCAGTGAATTGACAGAACGTTTTGCC GGTCGAAAGGTAATGCTTGGTGTTGACCGACTTGACATGATTAAGGGAATTCCGCAAAAG ATTTTGGCCTTTGAAAAGTTTCTTGAGGAAAACCCAGACTGGAACAACAAAGTTGTTCTA CTGCAGATTGCTGTGCCAACAAGAACTGACGTCCCTGAATATCAAAAGCTAACGAGCCAA GTGCATGAAATTGTTGGGCGCATAAACGGTCGATTTGGAACGTTGACTGCTGTCCCTATT CATCATCTGGACCGATCTCTTGATTTCCATGCCTTGTGTGCTCTTTATGCAGTCACTGAT GTTGCTCTTGTAACATCACTGAGAGATGGGATGAACCTTGTGAGCTATGAATATGTTGCA TGCCAAGGGTCTAAGAAAGGAGTTCTGATACTTAGCGAGTTTGCTGGGGCAGCACAATCA CTTGGAGCTGGTGCCATTCTAGTAAACCCTTGGAATATTACAGAAGTTGCAGACTCAATA CGGCATGCTTTAACGATGCCATCCGATGAGAGAGAGAAACGACACAGACACAACTACGCA CATGTCACAACTCACACGGCTCAAGATTGGGCTGAAACTTTTGTATTTGAGCTAAATGAC ACGGTTGCTGAAGCACTACTGAGGACAAGACAAGTTCCTCCTGGTCTTCCTAGTCAAATG GCAATTCAGCAATATTTGCGCTCTAAAAATCGTCTGCTCATATTGGGTTTCAATTCGACA TTGACTGAGCCAGTCGAATCCTCTGGGAGAAGGGGTGGTGACCAAATCAAGGAAATGGAA CTCAAGTTGCATCCTGACTTAAAGGGTCCTCTGAGAGCCCTCTGTGAGGATGAGCGCACT ACAGTTATTGTTCTTAGCGGCAGTGACAGGAGTGTTCTTGATGAAAATTTTGGAGAATTT AAAATGTGGTTGGCGGCAGAGCATGGGATGTTTTTACGCCCGACTTACGGAGAATGGATG ACAACAATGCCTGAGCATCTGAACATGGATTGGGTTGACAGCGTAAAGCATGTTTTTGAA TACTTTACAGAAAGAACCCCAAGATCCCATTTCGAACATCGTGAAACATCATTTGTGTGG AACTATAAGTATGCTGATGTTGAGTTCGGAAGGCTACAAGCAAGAGATATGCTGCAGCAC TTGTGGACAGGTCCGATCTCAAATGCAGCTGTTGATGTTGTTCAAGGGAGTCGATCAGTT GAAGTTCGGTCTGTTGGAGTTACCAAGGGTGCTGCAATTGATCGTATTTTAGGGGAGATA GTTCACAGCGAAAACATGATTACTCCAATTGACTATGTCCTGTGCATAGGGCATTTCCTT GGGAAGGATGAGGACATCTACGTCTTCTTTGATCCCGAGTACCCTTCTGAATCCAAAGTA AAGCCAGAGGGCGGCTCAGCATCACTTGACCGGAGGCCGAACGGGAGGCCACCATCGAAT GGCAGGAGTAACTCCAGGAACCCACAGTCCAGGACACAGAAGGCGCAGCAGGCTGCATCC GAGAGGTCATCCTCATCAAGTCACAGCAGCACGAGCAGCAACCACGACTGGCGCGAAGGG TCCTCGGTCCTTGATCTCAAGGGCGAGAACTACTTCTCCTGCGCCGTCGGGAGGAAGCGG TCCAACGCCCGCTACCTGCTGAGCTCGTCGGAGGAGGTTGTCTCCTTCCTCAAAGAGTTG GCGACAGCGACAGCTGGCTTCCAGGCCACCTGTGCTGACTACATGCATGTTCTTGGATAG

Peptide Sequence

PEP ID	Zm00001d010755_P025
PEP Infomation	pep chromosome:B73_RefGen_v4:8:126969688:126978061:1 gene:Zm00001d010755 transcript:Zm00001d010755_T025 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase1 description: trehalose-6-phosphate synthase1
Sequence	MPTSSPFVGDSGGAGSPIRVERMVRERSRRYDIFASDAMDTDAEAAFALDGVQSPGRASP ANMEDAGGAAAARPPLAGSRSGFRRLGLRGMKQRLLVVANRLPVSANRRGEDHWSLEISA GGLVSALLGVKDVDAKWIGWAGVNVPDEVGQRALTKALAEKRCIPVFLDEEIVHQYYNGY CNNILWPLFHYLGLPQEDRLATTRNFESQFDAYKRANQMFADVVYEHYQDGDVIWCHDYH LMFLPKCLKDHDINMKVGWFLHTPFPSSEIYRTLPSRLELLRSVLCADLVGFHTYDYARH FVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFKRALELPAVKRHVSELTERFA GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWNNKVVLLQIAVPTRTDVPEYQKLTSQ VHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVA CQGSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVADSIRHALTMPSDEREKRHRHNYA HVTTHTAQDWAETFVFELNDTVAEALLRTRQVPPGLPSQMAIQQYLRSKNRLLILGFNST LTEPVESSGRRGGDQIKEMELKLHPDLKGPLRALCEDERTTVIVLSGSDRSVLDENFGEF KMWLAAEHGMFLRPTYGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFEHRETSFVW NYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRSVGVTKGAAIDRILGEI VHSENMITPIDYVLCIGHFLGKDEDIYVFFDPEYPSESKVKPEGGSASLDRRPNGRPPSN GRSNSRNPQSRTQKAQQAASERSSSSSHSSTSSNHDWREGSSVLDLKGENYFSCAVGRKR SNARYLLSSSEEVVSFLKELATATAGFQATCADYMHVLG

Transcript Sequence

Transcript ID	Zm00001d010755_T025
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:126969688:126978061:1 gene:Zm00001d010755 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase1 description: trehalose-6-phosphate synthase1
Sequence	CACTCGTGTGCTCGCAAACAAGCGTCCGAGTTGGAGGCGTGGCGGCCCGTTTTGCATGCC GTAGCTCTCCCGGTGTTCCTCCCCTTCCGAACCCCTCGCCGCCTCTCCGTCTCGTGATTC GAATCACTGCCCCATTGCGAACGAGCCGCCACAGCTGCTGCCAGCCTCAAGGAAGGGCCC CGGTTCCCAATCCCAGACGGGCCAGCGGATCGATCGAACAGGCGGCCGGCCACTCGGGAT CGGGTGGGGGGCAGCGCGGCATCAACTGCACGAGGGGCGACGCGGCGGCGATGCCAACCT CATCGCCCTTTGTCGGCGACAGCGGCGGCGCGGGCTCCCCGATCCGCGTCGAGCGAATGG TCCGCGAGCGTAGCCGCCGCTACGACATCTTCGCGTCGGACGCGATGGATACCGACGCCG AGGCGGCCTTCGCGCTGGATGGGGTCCAGTCGCCTGGACGTGCGTCACCCGCCAACATGG AGGATGCTGGCGGCGCGGCCGCAGCGCGACCGCCGCTCGCCGGCTCCCGCAGCGGTTTCC GCCGCCTAGGCCTCCGTGGCATGAAGCAGCGCCTCCTCGTCGTGGCCAACCGCCTGCCTG TATCCGCCAACCGCCGCGGAGAGGACCACTGGTCGCTTGAGATCAGCGCCGGCGGCCTTG TGAGCGCCCTCCTTGGCGTGAAGGACGTCGACGCGAAGTGGATTGGCTGGGCAGGCGTCA ACGTACCGGACGAGGTTGGTCAGCGAGCCCTCACTAAAGCTCTTGCGGAGAAGAGATGCA TACCAGTGTTCCTGGACGAGGAGATTGTGCACCAGTACTACAATGGATACTGCAACAACA TCCTGTGGCCACTGTTCCACTACCTAGGACTACCACAGGAGGACAGGCTGGCAACAACGA GGAACTTTGAGTCACAGTTCGACGCGTACAAGCGTGCTAACCAGATGTTCGCTGATGTCG TGTACGAGCACTACCAGGACGGGGATGTGATCTGGTGCCATGACTACCACCTCATGTTTC TGCCCAAGTGCCTCAAGGACCATGACATCAATATGAAGGTCGGGTGGTTCCTGCACACGC CGTTCCCGTCATCAGAGATTTACCGGACACTGCCGTCCCGCTTGGAGCTGCTTCGGTCGG TGCTGTGTGCCGATTTAGTTGGATTTCATACTTACGACTATGCGAGGCATTTTGTGAGTG CTTGCACTAGAATACTTGGACTTGAGGGTACCCCTGAGGGCGTTGAAGATCAAGGAAGGC TAACCAGGGTTGCAGCGTTTCCTATTGGGATAGACTCTGATCGTTTCAAGCGAGCATTGG AGCTTCCAGCAGTGAAAAGGCACGTCAGTGAATTGACAGAACGTTTTGCCGGTCGAAAGG TAATGCTTGGTGTTGACCGACTTGACATGATTAAGGGAATTCCGCAAAAGATTTTGGCCT TTGAAAAGTTTCTTGAGGAAAACCCAGACTGGAACAACAAAGTTGTTCTACTGCAGATTG CTGTGCCAACAAGAACTGACGTCCCTGAATATCAAAAGCTAACGAGCCAAGTGCATGAAA TTGTTGGGCGCATAAACGGTCGATTTGGAACGTTGACTGCTGTCCCTATTCATCATCTGG ACCGATCTCTTGATTTCCATGCCTTGTGTGCTCTTTATGCAGTCACTGATGTTGCTCTTG TAACATCACTGAGAGATGGGATGAACCTTGTGAGCTATGAATATGTTGCATGCCAAGGGT CTAAGAAAGGAGTTCTGATACTTAGCGAGTTTGCTGGGGCAGCACAATCACTTGGAGCTG GTGCCATTCTAGTAAACCCTTGGAATATTACAGAAGTTGCAGACTCAATACGGCATGCTT TAACGATGCCATCCGATGAGAGAGAGAAACGACACAGACACAACTACGCACATGTCACAA CTCACACGGCTCAAGATTGGGCTGAAACTTTTGTATTTGAGCTAAATGACACGGTTGCTG AAGCACTACTGAGGACAAGACAAGTTCCTCCTGGTCTTCCTAGTCAAATGGCAATTCAGC AATATTTGCGCTCTAAAAATCGTCTGCTCATATTGGGTTTCAATTCGACATTGACTGAGC CAGTCGAATCCTCTGGGAGAAGGGGTGGTGACCAAATCAAGGAAATGGAACTCAAGTTGC ATCCTGACTTAAAGGGTCCTCTGAGAGCCCTCTGTGAGGATGAGCGCACTACAGTTATTG TTCTTAGCGGCAGTGACAGGAGTGTTCTTGATGAAAATTTTGGAGAATTTAAAATGTGGT TGGCGGCAGAGCATGGGATGTTTTTACGCCCGACTTACGGAGAATGGATGACAACAATGC CTGAGCATCTGAACATGGATTGGGTTGACAGCGTAAAGCATGTTTTTGAATACTTTACAG AAAGAACCCCAAGATCCCATTTCGAACATCGTGAAACATCATTTGTGTGGAACTATAAGT ATGCTGATGTTGAGTTCGGAAGGCTACAAGCAAGAGATATGCTGCAGCACTTGTGGACAG GTCCGATCTCAAATGCAGCTGTTGATGTTGTTCAAGGGAGTCGATCAGTTGAAGTTCGGT CTGTTGGAGTTACCAAGGGTGCTGCAATTGATCGTATTTTAGGGGAGATAGTTCACAGCG AAAACATGATTACTCCAATTGACTATGTCCTGTGCATAGGGCATTTCCTTGGGAAGGATG AGGACATCTACGTCTTCTTTGATCCCGAGTACCCTTCTGAATCCAAAGTAAAGCCAGAGG GCGGCTCAGCATCACTTGACCGGAGGCCGAACGGGAGGCCACCATCGAATGGCAGGAGTA ACTCCAGGAACCCACAGTCCAGGACACAGAAGGCGCAGCAGGCTGCATCCGAGAGGTCAT CCTCATCAAGTCACAGCAGCACGAGCAGCAACCACGACTGGCGCGAAGGGTCCTCGGTCC TTGATCTCAAGGGCGAGAACTACTTCTCCTGCGCCGTCGGGAGGAAGCGGTCCAACGCCC GCTACCTGCTGAGCTCGTCGGAGGAGGTTGTCTCCTTCCTCAAAGAGTTGGCGACAGCGA CAGCTGGCTTCCAGGCCACCTGTGCTGACTACATGCATGTTCTTGGATAGGCAGTAAATA GACTGAAGTTGAAGCCTCCGTGCTTTACCAGAGACAGAGAGAAGAAGAATATTCATTCCT CGTATGCGCGACAGAGCTACACCCGTAGCTAGTCAGCGTGCTGTACAATCATGTACAAAA TTTATGCTCGTGATAAAACTGCGAGAGGGGAGCTAGCAAATGGGAAAGGATAAAGGAGTT TAGTTGCTTCTGGTACGAGACACAATCGCCTGATTTTGAGTTCTCTTCGATTTGTTGTCC TTTAAATTGCGCTTTTGAACTGGTTTGGGTGCACCTGAAATACGCCTGCGC