Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010720_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:8:125872082:125880170:1 gene:Zm00001d010720 gene_biotype:protein_coding transcript_biotype:protein_coding description:AGC (cAMP-dependent cGMP-dependent and protein kinase C) kinase family protein
Sequence

ATGTTGGAGAGAAAATTACAAGATGCCGAAGTTCCTGTAGAAGAGCAAAATAATATTCTT
AAGCATTTGGAGAAAAAAGAGACTGAATATATGCGCTTGCAGAGACACAAGATGGGAGTT
GAAGATTTTGAACTTCTGACTATTATTGGGAGAGGTGCATTTGGAGAGGTGCGTCTTTGT
AGAGAGAAGACATCTAAGAATGTTTACGCAATGAAAAAACTCAAGAAATCTGAAATGCTT
CGTAGGGGCCAGGTAGAACATGTCAAAGCTGAAAGGAACCTTCTTGCTGAAGTTGATAGT
GCTTACATAGTTAAGCTCTATTATTCTTTCCAAGACGAAGAGTTCTTATATCTCATCATG
GAATACCTTCCTGGCGGGGACATGATGACTTTACTTATGCGCAAGGACATACTAACAGAA
GATGAAGCTAGATTTTATATTGCAGAAACTGTGCTTGCCATTGAGTCTATTCACAAGCAC
AACTATATTCATCGGGATATCAAACCAGATAATCTTCTATTAGATCGCAGTGGTCACCTG
AAGCTTTCTGACTTCGGTTTGTGTAAACCTTTGGACAGCAGTAATTTTCCAAATTTGAAT
GAACCAGATTATACATCTGGAAAAGTTACCAAGCCTTTGCCTGATACCACTTGGTTAAGC
AACCCTTCTGCACCGAGGCGTACACAGCAGGAGCAATTGTCACACTGGCAAAAGAACCGC
AGAATGTTGGCATACTCAACAGTCGGCACACCTGATTATATTGCTCCAGAAGTTCTACTG
AAGAAGGGATATGGAATGGAGTGTGACTGGTGGTCCCTTGGTGCTATCATGTATGAAATG
CTTGTTGGTTACCCTCCATTTTATTCAGAGGATCCAATGTCTACTTGCAGAAAGATTGTG
AACTGGAGAAGTCACTTGAAATTCCCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGAT
CTCATCAGCAAGCTTTTGTGTAATGTTGAGCAGAGACTTGGCACAAAAGGAGCCCATGAA
ATAAAAGCACATCCATGGTTTAGAGGTGTTCAGTGGGAGAAGTTGTATCAGATGAAAGCT
GCTTTCATACCAGAAGTTAATGGCGAATTGGATACTCAGAATTTTGAGAAATTTGAGGAG
ACTGGAACTCAAATTCAAAGTTCATCCAAGTCAGGCCCATGGAGAAAGATGCTTCCATCC
AAAGATGCAAACTTTGTTGGGTATACGTACAAGAACTTTGAAATTGTAAATGATGATGAA
GTGGCAGGAATTGCGGAGTTGAAGAAAAAGAGTTCCAAATCAAAGCGACCAACCATCAAG
ACATTGTTTGAGAGTATGGACGAAGAGGAACCTGTTCAAGGAAGTTTCTTAGGTATGTTG
CCCCCAAAGGAAGGGCAACCTTCGTCCCACTCCAGCGTTCCACAAGAAAGACACCAACCT
CGACGTAAATAG

Peptide Sequence

PEP ID

Zm00001d010720_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:8:125872082:125880170:1 gene:Zm00001d010720 transcript:Zm00001d010720_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:AGC (cAMP-dependent cGMP-dependent and protein kinase C) kinase family protein
Sequence

MLERKLQDAEVPVEEQNNILKHLEKKETEYMRLQRHKMGVEDFELLTIIGRGAFGEVRLC
REKTSKNVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYYSFQDEEFLYLIM
EYLPGGDMMTLLMRKDILTEDEARFYIAETVLAIESIHKHNYIHRDIKPDNLLLDRSGHL
KLSDFGLCKPLDSSNFPNLNEPDYTSGKVTKPLPDTTWLSNPSAPRRTQQEQLSHWQKNR
RMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIV
NWRSHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAHEIKAHPWFRGVQWEKLYQMKA
AFIPEVNGELDTQNFEKFEETGTQIQSSSKSGPWRKMLPSKDANFVGYTYKNFEIVNDDE
VAGIAELKKKSSKSKRPTIKTLFESMDEEEPVQGSFLGMLPPKEGQPSSHSSVPQERHQP
RRK

Transcript Sequence

Transcript ID

Zm00001d010720_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:125872082:125880170:1 gene:Zm00001d010720 gene_biotype:protein_coding transcript_biotype:protein_coding description:AGC (cAMP-dependent cGMP-dependent and protein kinase C) kinase family protein
Sequence

CTAGGCGCTGGATGTTGGAGAGAAAATTACAAGATGCCGAAGTTCCTGTAGAAGAGCAAA
ATAATATTCTTAAGCATTTGGAGAAAAAAGAGACTGAATATATGCGCTTGCAGAGACACA
AGATGGGAGTTGAAGATTTTGAACTTCTGACTATTATTGGGAGAGGTGCATTTGGAGAGG
TGCGTCTTTGTAGAGAGAAGACATCTAAGAATGTTTACGCAATGAAAAAACTCAAGAAAT
CTGAAATGCTTCGTAGGGGCCAGGTAGAACATGTCAAAGCTGAAAGGAACCTTCTTGCTG
AAGTTGATAGTGCTTACATAGTTAAGCTCTATTATTCTTTCCAAGACGAAGAGTTCTTAT
ATCTCATCATGGAATACCTTCCTGGCGGGGACATGATGACTTTACTTATGCGCAAGGACA
TACTAACAGAAGATGAAGCTAGATTTTATATTGCAGAAACTGTGCTTGCCATTGAGTCTA
TTCACAAGCACAACTATATTCATCGGGATATCAAACCAGATAATCTTCTATTAGATCGCA
GTGGTCACCTGAAGCTTTCTGACTTCGGTTTGTGTAAACCTTTGGACAGCAGTAATTTTC
CAAATTTGAATGAACCAGATTATACATCTGGAAAAGTTACCAAGCCTTTGCCTGATACCA
CTTGGTTAAGCAACCCTTCTGCACCGAGGCGTACACAGCAGGAGCAATTGTCACACTGGC
AAAAGAACCGCAGAATGTTGGCATACTCAACAGTCGGCACACCTGATTATATTGCTCCAG
AAGTTCTACTGAAGAAGGGATATGGAATGGAGTGTGACTGGTGGTCCCTTGGTGCTATCA
TGTATGAAATGCTTGTTGGTTACCCTCCATTTTATTCAGAGGATCCAATGTCTACTTGCA
GAAAGATTGTGAACTGGAGAAGTCACTTGAAATTCCCTGAAGAGGCAAAGCTTTCTCCTG
AAGCTAAGGATCTCATCAGCAAGCTTTTGTGTAATGTTGAGCAGAGACTTGGCACAAAAG
GAGCCCATGAAATAAAAGCACATCCATGGTTTAGAGGTGTTCAGTGGGAGAAGTTGTATC
AGATGAAAGCTGCTTTCATACCAGAAGTTAATGGCGAATTGGATACTCAGAATTTTGAGA
AATTTGAGGAGACTGGAACTCAAATTCAAAGTTCATCCAAGTCAGGCCCATGGAGAAAGA
TGCTTCCATCCAAAGATGCAAACTTTGTTGGGTATACGTACAAGAACTTTGAAATTGTAA
ATGATGATGAAGTGGCAGGAATTGCGGAGTTGAAGAAAAAGAGTTCCAAATCAAAGCGAC
CAACCATCAAGACATTGTTTGAGAGTATGGACGAAGAGGAACCTGTTCAAGGAAGTTTCT
TAGGTATGTTGCCCCCAAAGGAAGGGCAACCTTCGTCCCACTCCAGCGTTCCACAAGAAA
GACACCAACCTCGACGTAAATAGGATATGGAGGTTCAAAACGTAAAGCATAGGAAAGTAA
AACAAGTGGGAAAAAAAAAATCTTCTGCTGCCTTTTGATATGCTCCCTGTCTAAGTTTTG
TAAATCCTAACCATTGCGTTCTTTAGCCAAATGTTTAAAACAAAAAAGATCACCGGCCAA
ATAGTGTATGGCATTGGCATCTGATGTGAGCATCAGTGTTCGCTGTATATTGTGTTACCG
TTCTAAC