Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010716_T052
CDS Infomation	cds chromosome:B73_RefGen_v4:8:125525044:125537761:-1 gene:Zm00001d010716 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence	ATGGCAGGTTCTGCAGTAACAGATGATTCAGCTGCTAGCACAACTGGAATGAGGGATGAT GAACGCAGTCTCTCTGGCGAGTCCTTCTCCGAGTGGAGGTCCTGTGAGCGGGCAGACAGT GACACCCCTTCAACATCCCCACCCTTCTGGGATAGCGATGGTGATGATGATGATCCTGGC CCCAAGCCTTCAGAATTGTTTGGACGTTACACTTGGAGGATTGAAAACTTCTCGAAGGAG AAGAAAAGAGAAATGAAAAGTGAGCCATTTGAAGCTGGTGGTTACAAATGGTATATTCTT GTATATCCTCAAGGATGTGATGTCTCTAATCATCTTTCATTATTCCTTTGCGTTGCTAAT CATGACAAACTTCTCCCAGGATGGAGTCATTTTGCACAGTTCACTATAGCTGTAGCCAAT ATAGATCCTAAAAAGATGAAGTACTCAGATACTTTGCATAGGTTCTGGAAGAAGGAGCAT GATTGGGGATGGAAAAAATTTATGGAGCTATCAAAGATTCAGGATGGTTTTCTTGTTGAT GATGTTCTTGAAATCATAGCTCAAGTTCAGGTTATCAGGGAGAAAGTGGATAGACCTTTT CGTTGCCTTGATCGTCCTTACCGGAGAGAATTGATCCGCATCTATATGACAAATGTGGAA CAAATATACCGACGTTTTATTGAGGAGCGAAGAAGTAAATTAAGCAAGCTCATTGAGGAC AAAATAAAATGGTCCAGTTTTCGTGCTTTCTGGTCAGCAATTGACCCAAACACCAGGCAT CGCATGTCCAGGGAAAAGACTGACACCATATTGAAAATGTTAGTGAAGCAATTCTTTGTA GAGAAAGAAGTTACTTCCACATTAGTGATGGACTCCTTGTATACGAGTCTGAAGGCACTT GAATACCAGATGAAGGGCAGGAAAGGCAAAACAAAATTAGCAGATTTGGAAGAACTACCT GCGCCTATGGTCCATGTTGACATGGACATGTTTATTTTGGCTGATGATGTCATAGCTTTG CTTGAGAGAGCTGCCTTAGAACCCTTGCCTTGTCAACCTTTAGCCCCCAAGGATGATAAA ACTTCCCAACCCCGCATGAAGGGAAGTTCTGGTGAGGTTTACAATGTTTCTATGGAGCGT GAGGAAAGACGTCTAACTGAGCTTGGTCAGAAGATACTAGAGACATTTGTGCTATCTCAT ATATTTAGTGGAATTGAAGTTGCGTACCAAGAAGCTGTTGCATTGAAAAGGCAAGAGGAG CTTATTCGTGAGGAGGAGGAGGAGGCTGGGCTTCTTGAACATCAGATGAAGGGGAAGCGT GGTGGTGGTGTAAATGAAAAGGACAAGCGTGCCAAGAAAAAGCAGACCAAGCAAAAGAAG AACCGTAAGGCTAAAGACAAGGAAAGAGATGAGAAATGCGAGGTTAAAATTCTGGAAAGG CTTCGTGATGAAACTGCCATTGATAATAGTGATGGCTTACCATCTCAGGTGGAAGTGATA GCAAAGATTGATGCCTTGGAAGAAGGTTCTTCAGATGGGTCAGACATGTCAAATAGAGGG AAAAATCAGCGTAACAAGGGCTTAAGCATTATTAGCTTTGCCGAGGAAGGTGATGGTCTT CCCTCCACCTCTAATGTCACTGGTGGTTTAGGCCGCAATAGTTCTGGCTGCTGCACAGCT CCAAAACTGGATCAGGATACTGTTCTACTTACCTTGAGAGATAGACTTCGTAAGTTGGGG CAGCGTCTGCATGAGAAAAACATTGAGGGGCAGAAACTTCTCAAAAAACATTTTGAAGCT AGGGACGCAAAAGCGAAGGAAGAACCTTCTGACTCATCTAATTCTTTGGATAAGCCACCT GATGTTCCAGAGATCCCGGTGCATTCATCAGAAGATACCGTTGATCTTAAAGTGAATGGA ACACCAAAGAAGGATGCATCTGTGGTCAACCCTGTTCTGGAGGATTCTGTTTCAGGCATA CCAGTCACTGCAAACAATGAACCTGTGCCTTCTCCCACCACAACAAAAATGGACCCAGTT TCAAACAAAGTTAATGGATCAAGTTTGAAAATGAAAGTCACCATGGCATCTCCTTGCTCC AAATCACATCCAGCTGATATGGATAAAGATGCCTCTCTTCCTTCTAAATCACCACGAACC AATAGAGCTGCTCCAGTTCCTCCTAAGCTGCCTTCAGCTGATAAAGCAACGCTAGTTCCC TCAAAGCTACCTTCGGTTGATAAAGCTACTCCAGTTCCTCAAAAATCTCCGTTGGTAAAC AAAGTAGCTCAGGCCCGTCCCAAATCTCCAGCAGTTGACAAAGCAACTCCACATCGTCCC AAATCTCCAGCAGTTGACAAAGCAACTCCAGTTCGTTCTCAATCTCCAGCAGTTGACAAA GCCACTCTAGTTCGCCCTCAATCTCCAGCAGTTGACAAAGCAACTCCAGTTCGTCCTCAA TCCGCAGCAGTTGACAAAGCAACTCCAGTTCGCCCAAAATCTCCAGCCATTGATAAAGCA ACTCCAATTGCTCCCAAATCTCCACCAGTTGATAAAGCCTCTCCAGCTCTGCCAAAATCA TTATCAGGTGCTAAAGATGCGCTTTTTCCTTCTAGGTCGCTGCAGATTGATAAGTTTACT CCAGCCGCCCCAAGGTTATCACAAGATGATAAGGCTGCTCTGCCTTCTTCAGAACAGTCA CATATATCTCCAGCTACTAGTTCTGAAGCTCAAGGGGCAACTACTAGGAAGGTCACAACT ACCACCTCACTTTCAGAGGCTGCTGCAGCATGGAGGCCTTCAAGTGCTCCTGTGTTACCC ACACCAAGATCAACCGGGCCAGCTGCTTCACATATTCAAACTTCCACATTGCTTTCCCGC TCGATGAGTGAAGCAGCTGGGAGAAGGCCAGTAAATGATCCTTCATTTTCTGCCCCATCT TATACTCCACAGACCTACCGGAATGCAATAATTGGTAAGTCTGGTCTGTCTATGACCTCC GCAAGCCTTGCGTATCAGCCGTCTTCTCTGGATCAAGACACTGCTCCTTCACGGCCTCTA TCAGCATATGCATCAAGTACAGTCATGATGCCTCCTGCAGGAAGATCTGATCAGTCATCA GCTAGGCATGGATTCAAGTCTGGGCCTGGTAAGTTAGAAGCACATGACGGCTGGCAGCAG TGGAAAGGTGACAGTAATGTTGATATGCATCTCTGGAGGGACCACGCTCCTTACCAACAA ATGACCAACAGTCAAGCATATGAGCAGTCTCGGAGGGACGATACTTATCAGCAAGCATGC AGCAGAGGAACAGAAAAGTTCAGCAGGCATGCAGGACTGCAAGCTAGGCAGCAGTTCCAA ACCGAGACACCCGCCAGTCATGTATGGCATCAACCGCAGGGGCCAGTGGCAGAAGAATTT CCACACCTTGACATCATAAACGACTTGCTTGAGGAGGACCAGATCAACGGCAGTATACCG GAGTCGTTTCGTCAAGACTACAACGTGTTTGGCCTGCCGTTTTCACCGAGAGGAAACTTG TCAGACATGGAAATGGCTTCTGTTAGAAGTCCCGCTCGGTTCAATTCACCCAAGTACGAT GGTGGATTGTCGGGGGCTTATGACATGAATGCTGTCAATGGGTTGAGGGAACGGCAGTTT CCCTCGTTGGATATCTACTCTAATGGCCTGTCTGACGTGAGTGCTTCTAAGCCTTGGCTG AATGGCTCTGCCAGTCCATCGGTGAGCCTTGGGGTCAACACAAATGGATACCACCCCCAG GTGGGTGAGTACCTGGGAGGTGGGGTGAACGGGGTCTCCTTGTGGCGCCGCCATGCCAAC GGCCGCTGGTAA

Peptide Sequence

PEP ID	Zm00001d010716_P052
PEP Infomation	pep chromosome:B73_RefGen_v4:8:125525044:125537761:-1 gene:Zm00001d010716 transcript:Zm00001d010716_T052 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence	MAGSAVTDDSAASTTGMRDDERSLSGESFSEWRSCERADSDTPSTSPPFWDSDGDDDDPG PKPSELFGRYTWRIENFSKEKKREMKSEPFEAGGYKWYILVYPQGCDVSNHLSLFLCVAN HDKLLPGWSHFAQFTIAVANIDPKKMKYSDTLHRFWKKEHDWGWKKFMELSKIQDGFLVD DVLEIIAQVQVIREKVDRPFRCLDRPYRRELIRIYMTNVEQIYRRFIEERRSKLSKLIED KIKWSSFRAFWSAIDPNTRHRMSREKTDTILKMLVKQFFVEKEVTSTLVMDSLYTSLKAL EYQMKGRKGKTKLADLEELPAPMVHVDMDMFILADDVIALLERAALEPLPCQPLAPKDDK TSQPRMKGSSGEVYNVSMEREERRLTELGQKILETFVLSHIFSGIEVAYQEAVALKRQEE LIREEEEEAGLLEHQMKGKRGGGVNEKDKRAKKKQTKQKKNRKAKDKERDEKCEVKILER LRDETAIDNSDGLPSQVEVIAKIDALEEGSSDGSDMSNRGKNQRNKGLSIISFAEEGDGL PSTSNVTGGLGRNSSGCCTAPKLDQDTVLLTLRDRLRKLGQRLHEKNIEGQKLLKKHFEA RDAKAKEEPSDSSNSLDKPPDVPEIPVHSSEDTVDLKVNGTPKKDASVVNPVLEDSVSGI PVTANNEPVPSPTTTKMDPVSNKVNGSSLKMKVTMASPCSKSHPADMDKDASLPSKSPRT NRAAPVPPKLPSADKATLVPSKLPSVDKATPVPQKSPLVNKVAQARPKSPAVDKATPHRP KSPAVDKATPVRSQSPAVDKATLVRPQSPAVDKATPVRPQSAAVDKATPVRPKSPAIDKA TPIAPKSPPVDKASPALPKSLSGAKDALFPSRSLQIDKFTPAAPRLSQDDKAALPSSEQS HISPATSSEAQGATTRKVTTTTSLSEAAAAWRPSSAPVLPTPRSTGPAASHIQTSTLLSR SMSEAAGRRPVNDPSFSAPSYTPQTYRNAIIGKSGLSMTSASLAYQPSSLDQDTAPSRPL SAYASSTVMMPPAGRSDQSSARHGFKSGPGKLEAHDGWQQWKGDSNVDMHLWRDHAPYQQ MTNSQAYEQSRRDDTYQQACSRGTEKFSRHAGLQARQQFQTETPASHVWHQPQGPVAEEF PHLDIINDLLEEDQINGSIPESFRQDYNVFGLPFSPRGNLSDMEMASVRSPARFNSPKYD GGLSGAYDMNAVNGLRERQFPSLDIYSNGLSDVSASKPWLNGSASPSVSLGVNTNGYHPQ VGEYLGGGVNGVSLWRRHANGRW

Transcript Sequence

Transcript ID	Zm00001d010716_T052
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:125525044:125537761:-1 gene:Zm00001d010716 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence	CAGCTGCGAATAAGGTTGTCTGGAGCGGTCGTGGATTTTGTGGATGGCAGGTTCTGCAGT AACAGATGATTCAGCTGCTAGCACAACTGGAATGAGGGATGATGAACGCAGTCTCTCTGG CGAGTCCTTCTCCGAGTGGAGGTCCTGTGAGCGGGCAGACAGTGACACCCCTTCAACATC CCCACCCTTCTGGGATAGCGATGGTGATGATGATGATCCTGGCCCCAAGCCTTCAGAATT GTTTGGACGTTACACTTGGAGGATTGAAAACTTCTCGAAGGAGAAGAAAAGAGAAATGAA AAGTGAGCCATTTGAAGCTGGTGGTTACAAATGGTATATTCTTGTATATCCTCAAGGATG TGATGTCTCTAATCATCTTTCATTATTCCTTTGCGTTGCTAATCATGACAAACTTCTCCC AGGATGGAGTCATTTTGCACAGTTCACTATAGCTGTAGCCAATATAGATCCTAAAAAGAT GAAGTACTCAGATACTTTGCATAGGTTCTGGAAGAAGGAGCATGATTGGGGATGGAAAAA ATTTATGGAGCTATCAAAGATTCAGGATGGTTTTCTTGTTGATGATGTTCTTGAAATCAT AGCTCAAGTTCAGGTTATCAGGGAGAAAGTGGATAGACCTTTTCGTTGCCTTGATCGTCC TTACCGGAGAGAATTGATCCGCATCTATATGACAAATGTGGAACAAATATACCGACGTTT TATTGAGGAGCGAAGAAGTAAATTAAGCAAGCTCATTGAGGACAAAATAAAATGGTCCAG TTTTCGTGCTTTCTGGTCAGCAATTGACCCAAACACCAGGCATCGCATGTCCAGGGAAAA GACTGACACCATATTGAAAATGTTAGTGAAGCAATTCTTTGTAGAGAAAGAAGTTACTTC CACATTAGTGATGGACTCCTTGTATACGAGTCTGAAGGCACTTGAATACCAGATGAAGGG CAGGAAAGGCAAAACAAAATTAGCAGATTTGGAAGAACTACCTGCGCCTATGGTCCATGT TGACATGGACATGTTTATTTTGGCTGATGATGTCATAGCTTTGCTTGAGAGAGCTGCCTT AGAACCCTTGCCTTGTCAACCTTTAGCCCCCAAGGATGATAAAACTTCCCAACCCCGCAT GAAGGGAAGTTCTGGTGAGGTTTACAATGTTTCTATGGAGCGTGAGGAAAGACGTCTAAC TGAGCTTGGTCAGAAGATACTAGAGACATTTGTGCTATCTCATATATTTAGTGGAATTGA AGTTGCGTACCAAGAAGCTGTTGCATTGAAAAGGCAAGAGGAGCTTATTCGTGAGGAGGA GGAGGAGGCTGGGCTTCTTGAACATCAGATGAAGGGGAAGCGTGGTGGTGGTGTAAATGA AAAGGACAAGCGTGCCAAGAAAAAGCAGACCAAGCAAAAGAAGAACCGTAAGGCTAAAGA CAAGGAAAGAGATGAGAAATGCGAGGTTAAAATTCTGGAAAGGCTTCGTGATGAAACTGC CATTGATAATAGTGATGGCTTACCATCTCAGGTGGAAGTGATAGCAAAGATTGATGCCTT GGAAGAAGGTTCTTCAGATGGGTCAGACATGTCAAATAGAGGGAAAAATCAGCGTAACAA GGGCTTAAGCATTATTAGCTTTGCCGAGGAAGGTGATGGTCTTCCCTCCACCTCTAATGT CACTGGTGGTTTAGGCCGCAATAGTTCTGGCTGCTGCACAGCTCCAAAACTGGATCAGGA TACTGTTCTACTTACCTTGAGAGATAGACTTCGTAAGTTGGGGCAGCGTCTGCATGAGAA AAACATTGAGGGGCAGAAACTTCTCAAAAAACATTTTGAAGCTAGGGACGCAAAAGCGAA GGAAGAACCTTCTGACTCATCTAATTCTTTGGATAAGCCACCTGATGTTCCAGAGATCCC GGTGCATTCATCAGAAGATACCGTTGATCTTAAAGTGAATGGAACACCAAAGAAGGATGC ATCTGTGGTCAACCCTGTTCTGGAGGATTCTGTTTCAGGCATACCAGTCACTGCAAACAA TGAACCTGTGCCTTCTCCCACCACAACAAAAATGGACCCAGTTTCAAACAAAGTTAATGG ATCAAGTTTGAAAATGAAAGTCACCATGGCATCTCCTTGCTCCAAATCACATCCAGCTGA TATGGATAAAGATGCCTCTCTTCCTTCTAAATCACCACGAACCAATAGAGCTGCTCCAGT TCCTCCTAAGCTGCCTTCAGCTGATAAAGCAACGCTAGTTCCCTCAAAGCTACCTTCGGT TGATAAAGCTACTCCAGTTCCTCAAAAATCTCCGTTGGTAAACAAAGTAGCTCAGGCCCG TCCCAAATCTCCAGCAGTTGACAAAGCAACTCCACATCGTCCCAAATCTCCAGCAGTTGA CAAAGCAACTCCAGTTCGTTCTCAATCTCCAGCAGTTGACAAAGCCACTCTAGTTCGCCC TCAATCTCCAGCAGTTGACAAAGCAACTCCAGTTCGTCCTCAATCCGCAGCAGTTGACAA AGCAACTCCAGTTCGCCCAAAATCTCCAGCCATTGATAAAGCAACTCCAATTGCTCCCAA ATCTCCACCAGTTGATAAAGCCTCTCCAGCTCTGCCAAAATCATTATCAGGTGCTAAAGA TGCGCTTTTTCCTTCTAGGTCGCTGCAGATTGATAAGTTTACTCCAGCCGCCCCAAGGTT ATCACAAGATGATAAGGCTGCTCTGCCTTCTTCAGAACAGTCACATATATCTCCAGCTAC TAGTTCTGAAGCTCAAGGGGCAACTACTAGGAAGGTCACAACTACCACCTCACTTTCAGA GGCTGCTGCAGCATGGAGGCCTTCAAGTGCTCCTGTGTTACCCACACCAAGATCAACCGG GCCAGCTGCTTCACATATTCAAACTTCCACATTGCTTTCCCGCTCGATGAGTGAAGCAGC TGGGAGAAGGCCAGTAAATGATCCTTCATTTTCTGCCCCATCTTATACTCCACAGACCTA CCGGAATGCAATAATTGGTAAGTCTGGTCTGTCTATGACCTCCGCAAGCCTTGCGTATCA GCCGTCTTCTCTGGATCAAGACACTGCTCCTTCACGGCCTCTATCAGCATATGCATCAAG TACAGTCATGATGCCTCCTGCAGGAAGATCTGATCAGTCATCAGCTAGGCATGGATTCAA GTCTGGGCCTGGTAAGTTAGAAGCACATGACGGCTGGCAGCAGTGGAAAGGTGACAGTAA TGTTGATATGCATCTCTGGAGGGACCACGCTCCTTACCAACAAATGACCAACAGTCAAGC ATATGAGCAGTCTCGGAGGGACGATACTTATCAGCAAGCATGCAGCAGAGGAACAGAAAA GTTCAGCAGGCATGCAGGACTGCAAGCTAGGCAGCAGTTCCAAACCGAGACACCCGCCAG TCATGTATGGCATCAACCGCAGGGGCCAGTGGCAGAAGAATTTCCACACCTTGACATCAT AAACGACTTGCTTGAGGAGGACCAGATCAACGGCAGTATACCGGAGTCGTTTCGTCAAGA CTACAACGTGTTTGGCCTGCCGTTTTCACCGAGAGGAAACTTGTCAGACATGGAAATGGC TTCTGTTAGAAGTCCCGCTCGGTTCAATTCACCCAAGTACGATGGTGGATTGTCGGGGGC TTATGACATGAATGCTGTCAATGGGTTGAGGGAACGGCAGTTTCCCTCGTTGGATATCTA CTCTAATGGCCTGTCTGACGTGAGTGCTTCTAAGCCTTGGCTGAATGGCTCTGCCAGTCC ATCGGTGAGCCTTGGGGTCAACACAAATGGATACCACCCCCAGGTGGGTGAGTACCTGGG AGGTGGGGTGAACGGGGTCTCCTTGTGGCGCCGCCATGCCAACGGCCGCTGGTAATGCGA GGTGCCTGTATACAATCATACAGTCGGAATAATGTTTTGTTGTAACAGATGGTTTCGGGC CTGAGCTGATGCGCCATGTAATTAAAAGTTTTTAAGTT