Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010714_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:8:125357325:125362877:-1 gene:Zm00001d010714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	ATGGGTAGTTCTGATTGGAGAGATGGTAGGCCATTTGATAGTAGAGGGTCAAGTAATTGG CCAGATAATGTTGGGAAGTTCCTGAGGTTTCACCTGTACAAAGAGAACAAGGACACCCAA GAAGCATTAGGAGTAATAGGAAAAATGCTAGGACTTCAGCCACGGTCATTTGGGTTTGCA GGTACAAAGGATAAGCGTGCTGTTACTACACAGCAGGTAACTGTATTCAAGGTGCAAGCC AGTAAGTTGCTTGCTCTTAACAAGCGGCTGTTTGGGATTAAAGTTGGAAATTTCTGTTAC GTGAAGGAGGGACTTGTTCTTGGTCAGCTCACAGGAAATCGATTTACAATTACTCTGAGG GGTGTTACTGCAGAATCTGAAGACATGATAAAAATTGCAGTAGATGGCCTAGGAAAGAAT GGATTTATCAACTACTATGGTTTGCAGCGGTTTGGAAGTGGTTCAATACCAACACATCTT GTTGGGGCTGCTTTGCTTAGAGGAGAGTGGAAGGTTGCTGTAAACTTGATTCTTGATCCA AGGGAAGGAGAGCGTGATGACATCAATGAGGTGCGCAAACGTTACAAAGAACATGGTGAC ATTGATATGGCACTGAGAAACTTCCCTCGACACCTCGTAGCTGAGAGGGCCATACTTCAA TGTCTGAAGAAATGCCCTGGTAACCATCTACAAGCACTCAAGGGTATACCAAGAACACTG AGAATGATGTACGTACATAGTTACCAAAGTTATCTGTGGAATCATGCTGCCAGTATGAGA GTGGAAAAGTATGGCATCTCACAGGTTGTAGAAGGTGACTTAGTGTATAACAAAGAATGC CCTTCAGAAGAATCAACTTCCGTAGATATTCTGGAAACTGATGATGACCATACAAATTCA ATTGAAATCGATCTATGTTCTGAAGCACAACCAGAAGAAAGCATCCAGTCTGCGAAGATA GTTGATTCTGGAGATTTTACTAAGGGGATATACACTTTTGATGATGTTGTCCTACCTTTG CCTGGTTCACAAGCATTGTTTCCTGGGAATGAAATTGCCGAGATTTACCATGAAATGGCT AGAAAGGATGGCATTAGCTTGACGGAGAATGCTCATGGTGTCAAGGAGTTTTCGATTACA AGCATGAAAGGTGGTTACCGCCGAGTGTTCCAGCGGCCTATTGGTTTTGAGTGGGAACTC ATAACTTACACAGATGATACTTCATCTTTAGCAGAAACTGATTTGGATGTTCTGTCCAGA ACCAAGCCTAAAGAAGCAAACGAGCTTATTTCTAAGCAGGAATCGCAGGATAAGTTGGAA AAGGCTCCTGATACCTCTGTGCCAACTAATGGGAATAGCTCCCAAGAAAAGCTTATTGGC AGCCCAGATATACGACCAAAGAAATTGGCCTTAAAATTAGCATTTACTTTACCAACATCA TGCTACGCTACAATGGCTATCCGGGAGCTTCTGAAGACTTCCACCTCAGTTGCATATCAG AAAACACTCAGCTGCTAG

Peptide Sequence

PEP ID	Zm00001d010714_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:8:125357325:125362877:-1 gene:Zm00001d010714 transcript:Zm00001d010714_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	MGSSDWRDGRPFDSRGSSNWPDNVGKFLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFA GTKDKRAVTTQQVTVFKVQASKLLALNKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLR GVTAESEDMIKIAVDGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDP REGERDDINEVRKRYKEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTL RMMYVHSYQSYLWNHAASMRVEKYGISQVVEGDLVYNKECPSEESTSVDILETDDDHTNS IEIDLCSEAQPEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMA RKDGISLTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSR TKPKEANELISKQESQDKLEKAPDTSVPTNGNSSQEKLIGSPDIRPKKLALKLAFTLPTS CYATMAIRELLKTSTSVAYQKTLSC

Transcript Sequence

Transcript ID	Zm00001d010714_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:125357325:125362877:-1 gene:Zm00001d010714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	TAGGAGGTGCATAACTTCTTTAAGAAGACCTTCAAGTTCCTGGTCACGGACACGGTGGAA CACAGTGATGGGGTCCAGAAGTGCATCAGGGTGCGGTTCGGGTCAGAAGCAGGTGTCGGA AGGGGTGCTGGCGGCCGTGGGAGAGGAAGGAAACGGAAGAACATGGGTAGTTCTGATTGG AGAGATGGTAGGCCATTTGATAGTAGAGGGTCAAGTAATTGGCCAGATAATGTTGGGAAG TTCCTGAGGTTTCACCTGTACAAAGAGAACAAGGACACCCAAGAAGCATTAGGAGTAATA GGAAAAATGCTAGGACTTCAGCCACGGTCATTTGGGTTTGCAGGTACAAAGGATAAGCGT GCTGTTACTACACAGCAGGTAACTGTATTCAAGGTGCAAGCCAGTAAGTTGCTTGCTCTT AACAAGCGGCTGTTTGGGATTAAAGTTGGAAATTTCTGTTACGTGAAGGAGGGACTTGTT CTTGGTCAGCTCACAGGAAATCGATTTACAATTACTCTGAGGGGTGTTACTGCAGAATCT GAAGACATGATAAAAATTGCAGTAGATGGCCTAGGAAAGAATGGATTTATCAACTACTAT GGTTTGCAGCGGTTTGGAAGTGGTTCAATACCAACACATCTTGTTGGGGCTGCTTTGCTT AGAGGAGAGTGGAAGGTTGCTGTAAACTTGATTCTTGATCCAAGGGAAGGAGAGCGTGAT GACATCAATGAGGTGCGCAAACGTTACAAAGAACATGGTGACATTGATATGGCACTGAGA AACTTCCCTCGACACCTCGTAGCTGAGAGGGCCATACTTCAATGTCTGAAGAAATGCCCT GGTAACCATCTACAAGCACTCAAGGGTATACCAAGAACACTGAGAATGATGTACGTACAT AGTTACCAAAGTTATCTGTGGAATCATGCTGCCAGTATGAGAGTGGAAAAGTATGGCATC TCACAGGTTGTAGAAGGTGACTTAGTGTATAACAAAGAATGCCCTTCAGAAGAATCAACT TCCGTAGATATTCTGGAAACTGATGATGACCATACAAATTCAATTGAAATCGATCTATGT TCTGAAGCACAACCAGAAGAAAGCATCCAGTCTGCGAAGATAGTTGATTCTGGAGATTTT ACTAAGGGGATATACACTTTTGATGATGTTGTCCTACCTTTGCCTGGTTCACAAGCATTG TTTCCTGGGAATGAAATTGCCGAGATTTACCATGAAATGGCTAGAAAGGATGGCATTAGC TTGACGGAGAATGCTCATGGTGTCAAGGAGTTTTCGATTACAAGCATGAAAGGTGGTTAC CGCCGAGTGTTCCAGCGGCCTATTGGTTTTGAGTGGGAACTCATAACTTACACAGATGAT ACTTCATCTTTAGCAGAAACTGATTTGGATGTTCTGTCCAGAACCAAGCCTAAAGAAGCA AACGAGCTTATTTCTAAGCAGGAATCGCAGGATAAGTTGGAAAAGGCTCCTGATACCTCT GTGCCAACTAATGGGAATAGCTCCCAAGAAAAGCTTATTGGCAGCCCAGATATACGACCA AAGAAATTGGCCTTAAAATTAGCATTTACTTTACCAACATCATGCTACGCTACAATGGCT ATCCGGGAGCTTCTGAAGACTTCCACCTCAGTTGCATATCAGAAAACACTCAGCTGCTAG ATTCTGTTTGGAAGACATTCCTTCATAGGAGTATCTCTTAATTACATGGCTGCTGCCTGT CTTCACGGCAGTTAGAATACCTGGAGGACTGATGAATCCACAAAAATGATGCATTCTGCA CATGAGGCATAACAAACAATATGTCCTAATAAGTGTTTCTTAGGGGAAGACCGTGAGGAT GATGTATTGGGATATCTATTCCGCGACATGCTTTGTATAACATAAACTCCATTTGCAATA ATGGAATCAACTTGGGTTAGC