Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010711_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:8:125265030:125271121:1 gene:Zm00001d010711 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIF beta subunit
Sequence

ATGGATGAGGAAGCCGAGTACCTGGAGACGGCTCGGGCCGACCGCTCCGTGTGGCTCATG
AAGTGCCCCCCGGTCGTTTCCCGCGCCTGGCAGGCCGCCTCCGCCTCTTCCTCCGATGCT
GCCAACGCCAACCCCGTCGTTGCCAAGGTCGTCCTTTCCCTTGACCTGTTGCGCCAAGAA
GAACGCCCGGAAGAGCCTACGCTCCAGGCAAGTACCCACAATCCTCTCCACCCTGCTGGT
CCCTTCCCCTTCAAGATGGAATTGGCTCAAACTAACACCGGGAATACACCTAAGAGCTAC
TCTTTGAATATGTTCAAAGATTTCGTTCCTATGTGTGTTTTCTCCGAATCTAACCAAGGG
AAACTTTCATGTGAAGGAAAAGTCGAGCATAAATTTGACATGGAACCTCACAGCGATAAT
TTGGCGAACTATGGAAAGTTATGCCGTGAAAGAACACAAAAGTACATGGTTAAATCTAGA
CAAGTGCAGGTACTTGACAATGACCATGGAATGAGCATGAGGCCAATGCCTGGCATTGTT
GGTCTCATATCTTCTAGTTCAAAGGAAAAGAAGAAGCAAGCACCAGTGAAACCATCTGAT
GCCAAAAGAACTCGTAGGGATCGCACGGAGATGGAAAACGTTATATTCAAGCTTTTTGAA
AGGCAGCCCAATTGGGCCCTAAAGGCACTCGTGCAAGAAACTGACCAGCCAGAGCAATTC
CTGAAGGAGATATTGAACGATCTGTGTGTGTATAATAAACGAGGTCCAAACCAGGGAACG
CATGAGCTCAAGCCTGAGTACAAGAAATCCACAGGGGACACTGATACTGCTTGA

Peptide Sequence

PEP ID

Zm00001d010711_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:8:125265030:125271121:1 gene:Zm00001d010711 transcript:Zm00001d010711_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIF beta subunit
Sequence

MDEEAEYLETARADRSVWLMKCPPVVSRAWQAASASSSDAANANPVVAKVVLSLDLLRQE
ERPEEPTLQASTHNPLHPAGPFPFKMELAQTNTGNTPKSYSLNMFKDFVPMCVFSESNQG
KLSCEGKVEHKFDMEPHSDNLANYGKLCRERTQKYMVKSRQVQVLDNDHGMSMRPMPGIV
GLISSSSKEKKKQAPVKPSDAKRTRRDRTEMENVIFKLFERQPNWALKALVQETDQPEQF
LKEILNDLCVYNKRGPNQGTHELKPEYKKSTGDTDTA

Transcript Sequence

Transcript ID

Zm00001d010711_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:125265030:125271121:1 gene:Zm00001d010711 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIF beta subunit
Sequence

ATGGATGAGGAAGCCGAGTACCTGGAGACGGCTCGGGCCGACCGCTCCGTGTGGCTCATG
AAGTGCCCCCCGGTCGTTTCCCGCGCCTGGCAGGCCGCCTCCGCCTCTTCCTCCGATGCT
GCCAACGCCAACCCCGTCGTTGCCAAGGTCGTCCTTTCCCTTGACCTGTTGCGCCAAGAA
GAACGCCCGGAAGAGCCTACGCTCCAGGCAAGTACCCACAATCCTCTCCACCCTGCTGGT
CCCTTCCCCTTCAAGATGGAATTGGCTCAAACTAACACCGGGAATACACCTAAGAGCTAC
TCTTTGAATATGTTCAAAGATTTCGTTCCTATGTGTGTTTTCTCCGAATCTAACCAAGGG
AAACTTTCATGTGAAGGAAAAGTCGAGCATAAATTTGACATGGAACCTCACAGCGATAAT
TTGGCGAACTATGGAAAGTTATGCCGTGAAAGAACACAAAAGTACATGGTTAAATCTAGA
CAAGTGCAGGTACTTGACAATGACCATGGAATGAGCATGAGGCCAATGCCTGGCATTGTT
GGTCTCATATCTTCTAGTTCAAAGGAAAAGAAGAAGCAAGCACCAGTGAAACCATCTGAT
GCCAAAAGAACTCGTAGGGATCGCACGGAGATGGAAAACGTTATATTCAAGCTTTTTGAA
AGGCAGCCCAATTGGGCCCTAAAGGCACTCGTGCAAGAAACTGACCAGCCAGAGCAATTC
CTGAAGGAGATATTGAACGATCTGTGTGTGTATAATAAACGAGGTCCAAACCAGGGAACG
CATGAGCTCAAGCCTGAGTACAAGAAATCCACAGGGGACACTGATACTGCTTGAAGATGA
GAGACGACTTGGTCAAGGATACCATCAATGCTAAAGGAAGATCATCGCCTCTTTAAAAAG
CTTATGAACATGTGAACAAGCCGATGGTACACAAAGTCAAAGATATGCAACGTGTTCGTT
TTGTTTTAATCCGTACTGACTTGTACTGCTTGTAGAATGTTTTATCTTTATGGATTGCAG
TTGCAGCAGTCTGAACACCTGGTTTTAATCTAAAGCGAATAGATTGGAAGACAAAGCTTC
AATGTCGATGAGAGGACTTTAGAGGAGAGAAGAAATAAGAAGCTTCTACGAATAGAAGAG
AAGGCGTGTGTGACAAGTCTGTGGAGCAAAATGATATTATTGTACTCTCTTGGATACAAA
GAGTGACTATGTAATAGCTAGAGAAGAGTGTAATTTTATAGAAATGTGTAAAGGACTCGA
CTCATATATAGATGAACAATATAATCACTATAGGAGTCAGCTACTTGTAAACATCACACT
TGTTACATTCTTACCAGAGAGCTTTCGAAGAC