Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010620_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:122053017:122057278:-1 gene:Zm00001d010620 gene_biotype:protein_coding transcript_biotype:protein_coding description:proline-rich family protein
Sequence	ATGGAGGACCTGTTGGGTTCGGAGATCGGGAAGAACGACTACGATTGGCTTCTAACTCCT CCTGGGACCCCACGTGTTCCTGCACTGGAGTTTGCTGAGGAAACACCATCCTCAAATATA TTACTGAAGCGCACTGCAACTAGATCGTCCTCAACTACTAGAGCATCTAGGCTTCCAGTA TCTCAAACAGAGAATGGGCATTCGATGGTTCCCACTAGACCAACAAGAAGTAACAGCCGA CCATCTATCCAATCGGCTCTCATGAATGGCAACAACAGGACATCAGTTCCGAACACAAGC ATTTCTTCAGTGACTTCAAGACCTACAACCCCTAGTAGGCGAAGCAGCACAGTTGTCGCA CCAAAACAATCAGTTCCAGCTGCACGTACAGTGCCTGCAAGATCCTCTACACCTGTTAAA ACTCGTCTATCTACACCAGCAAAAACCCGCCCATCTACTCCTACAAGTACTCGCCCAACA GCACCAAACTCTTCAACTGATTCGTCTGCTGCCAAGACCACATCCACACATAATGTGAGG CCATCGACTCCAAATTCCCGACCCCGTATTGTTCCCAATTCATCTTCAGGTGCAGCTCAT ACAATAAGCCGCCCGAGCGCCTCCTCGAGTACAACAAGCAGATCAGGGTCTTCCTCAGGT AATGTTCCTGGGATAAGCCGTGCCACCTCGTTGTCCTCAAGTTCGATTCCTTCCATGAGC CATTCCAGCTCACGATCATCTACACCTACACGCCAACCTGCAATTCGTTCATCGGCTCCA GCTATTGGTCGTTCTCCTTCTGTTGGACGGAGTTCTAGCATCAACAGCTTTACATCTGTG TCCCAGTCTGCAGCCAGTAGTGGTCGGAACTCAGCACCTTCATCAGCTCCATCATCTCGT CCAAGTTCTCCGAATCCACGACCCCGAGCTCCAGTGCGACCACTTAATATCCCTGATTTC CCAAATGAAGCTCCACCAAATCTAAGGACAAAATTACCTGAAAGACCACTATCTGCTGGC AGATCACGGCCTGGAATGGCTTTAGGCATAAGATCAACCCCAAATACTGAACCTTCAGCC GCCTCAGCTCCTATGAAGAAGGTCTCTGTGTCTGCTGTTAGTCGAAGTAAATTTTCTGAT GCATCATCAAAGACCTCTACTCCCACAAATGGGCACCAAAATCGACAGGCTGAAAGGTCC ACTGTTGACAGCCAAGCTAATAGACCCTCAAGACCTGTCACAGGCACAGATAATGGATTT GGGAGGTCGATATCAAAGAGGTCACTTGACATGGCTATCAGGCACATGGACATTCGGCAG AACTTGGGTGGCATTCGAGGCGCATCCCTGTTTCCCCAGAGCACCCGCTCGGCTGCTGCC AAGGTCCGTCCAGCTCGGACATCAGACCCAGGGCATGGCATCTCAAAAGGCGACCAGCAC CGCACTGACAATGGAAACAGCTTGAACGGGCACCTCTATGTCTCTGGGGACTCTCCTTTT GTGCTGCAAAATGTGTATGATTTGGTC

Peptide Sequence

PEP ID	Zm00001d010620_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:122053017:122057278:-1 gene:Zm00001d010620 transcript:Zm00001d010620_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:proline-rich family protein
Sequence	MEDLLGSEIGKNDYDWLLTPPGTPRVPALEFAEETPSSNILLKRTATRSSSTTRASRLPV SQTENGHSMVPTRPTRSNSRPSIQSALMNGNNRTSVPNTSISSVTSRPTTPSRRSSTVVA PKQSVPAARTVPARSSTPVKTRLSTPAKTRPSTPTSTRPTAPNSSTDSSAAKTTSTHNVR PSTPNSRPRIVPNSSSGAAHTISRPSASSSTTSRSGSSSGNVPGISRATSLSSSSIPSMS HSSSRSSTPTRQPAIRSSAPAIGRSPSVGRSSSINSFTSVSQSAASSGRNSAPSSAPSSR PSSPNPRPRAPVRPLNIPDFPNEAPPNLRTKLPERPLSAGRSRPGMALGIRSTPNTEPSA ASAPMKKVSVSAVSRSKFSDASSKTSTPTNGHQNRQAERSTVDSQANRPSRPVTGTDNGF GRSISKRSLDMAIRHMDIRQNLGGIRGASLFPQSTRSAAAKVRPARTSDPGHGISKGDQH RTDNGNSLNGHLYVSGDSPFVLQNVYDLV

Transcript Sequence

Transcript ID	Zm00001d010620_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:122053017:122057278:-1 gene:Zm00001d010620 gene_biotype:protein_coding transcript_biotype:protein_coding description:proline-rich family protein
Sequence	CGCAGAGCTTCACGCTCTCCCACGCAGCCCTCCTCCAGACCTCCACCACTACCGCTACCA GCGGCAGCAGCGTCGCCCCCCTCCGCCTCTCCGCTTCCTTCTAGCCCTCTCATCGGCATC TCTAGCGCGGCGCATCTGTAGCGGAGGAGGAAGAGCGGAGCGTCGTCTCGCCCCGCCCGC GGCATTGGCTGCGGGAACTGGGAAAGGAGGAATTGAATAGGTACAAGCTTCGGGAACCTG CCTGATCCGGATCCGAATCCGCGCTGCCGACCGGCGGAGTTTTTCCTTTTCATAGTTTGG GGGCAACATAGCTTGCTCGAGAGATGGAGGACCTGTTGGGTTCGGAGATCGGGAAGAACG ACTACGATTGGCTTCTAACTCCTCCTGGGACCCCACGTGTTCCTGCACTGGAGTTTGCTG AGGAAACACCATCCTCAAATATATTACTGAAGCGCACTGCAACTAGATCGTCCTCAACTA CTAGAGCATCTAGGCTTCCAGTATCTCAAACAGAGAATGGGCATTCGATGGTTCCCACTA GACCAACAAGAAGTAACAGCCGACCATCTATCCAATCGGCTCTCATGAATGGCAACAACA GGACATCAGTTCCGAACACAAGCATTTCTTCAGTGACTTCAAGACCTACAACCCCTAGTA GGCGAAGCAGCACAGTTGTCGCACCAAAACAATCAGTTCCAGCTGCACGTACAGTGCCTG CAAGATCCTCTACACCTGTTAAAACTCGTCTATCTACACCAGCAAAAACCCGCCCATCTA CTCCTACAAGTACTCGCCCAACAGCACCAAACTCTTCAACTGATTCGTCTGCTGCCAAGA CCACATCCACACATAATGTGAGGCCATCGACTCCAAATTCCCGACCCCGTATTGTTCCCA ATTCATCTTCAGGTGCAGCTCATACAATAAGCCGCCCGAGCGCCTCCTCGAGTACAACAA GCAGATCAGGGTCTTCCTCAGGTAATGTTCCTGGGATAAGCCGTGCCACCTCGTTGTCCT CAAGTTCGATTCCTTCCATGAGCCATTCCAGCTCACGATCATCTACACCTACACGCCAAC CTGCAATTCGTTCATCGGCTCCAGCTATTGGTCGTTCTCCTTCTGTTGGACGGAGTTCTA GCATCAACAGCTTTACATCTGTGTCCCAGTCTGCAGCCAGTAGTGGTCGGAACTCAGCAC CTTCATCAGCTCCATCATCTCGTCCAAGTTCTCCGAATCCACGACCCCGAGCTCCAGTGC GACCACTTAATATCCCTGATTTCCCAAATGAAGCTCCACCAAATCTAAGGACAAAATTAC CTGAAAGACCACTATCTGCTGGCAGATCACGGCCTGGAATGGCTTTAGGCATAAGATCAA CCCCAAATACTGAACCTTCAGCCGCCTCAGCTCCTATGAAGAAGGTCTCTGTGTCTGCTG TTAGTCGAAGTAAATTTTCTGATGCATCATCAAAGACCTCTACTCCCACAAATGGGCACC AAAATCGACAGGCTGAAAGGTCCACTGTTGACAGCCAAGCTAATAGACCCTCAAGACCTG TCACAGGCACAGATAATGGATTTGGGAGGTCGATATCAAAGAGGTCACTTGACATGGCTA TCAGGCACATGGACATTCGGCAGAACTTGGGTGGCATTCGAGGCGCATCCCTGTTTCCCC AGAGCACCCGCTCGGCTGCTGCCAAGGTCCGTCCAGCTCGGACATCAGACCCAGGGCATG GCATCTCAAAAGGCGACCAGCACCGCACTGACAATGGAAACAGCTTGAACGGGCACCTCT ATGTCTCTGGGGACTCTCCTTTTGTGCTGCAAAATGTGTATGATTTGGTCTG