Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010596_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:121427947:121428690:1 gene:Zm00001d010596 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence

ATGGATCCCTCGGGGCCAGCCGGCGCCGGGGCCGGGCCGTCCTCGGCGGCGGGGGCGGGC
GGCGACGACGCGCACGCGCACGCGCCGCCGCAGCAGCACCAGATCCAGCCGCTTGCTCAG
GCGCAGGCGCAGCCGCAGCCGCATCAGCTGAGCAGGTACGAGTCGCAGAAGCGGCGGGAC
TGGAACACGTTCCTGCAGTACCTGCAGAACCACCGGCCGCCGCTGACGCTGGCGCGGTGC
AGCGGCGCGCACGTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGCAAGACCAAGGTG
CACGCCGCCGGGTGCGCCCACTTCGGCCAGCCCAGCCCGCCGGCGCCGTGCCCGTGCCCG
CTGCACCAGGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTGCGCGCCGCGTACGAG
GAGAGCGGCCACGCGCCCGAGTCCAACCCCTTCGCCGCCCGCGCCGTGCGGATCTACCTC
CGCGACGTCCGCGACGCGCAGGCCAAGGCGCGGGGCATACCCTACGAGAAGAAGAGCCGC
AAGCGCAAGCAGCCGCCGCCGGCCGCCGCTGCGGGGGAGGCGGCGGCGGCGTCGTCGTCT
TCGGCCGCGGCAGCACGGGTGGCCGCCGGGAGCGCCGGGGACGGGTCGTCCGCCAGTGGC
AGCGCGGCGGCGAAAGCTGCACCGACCACCGCCCAGGGAAGCGCCGCTGCTGATGCAGCG
ACCAGCACATCCCGAGTACAGTAG

Peptide Sequence

PEP ID

Zm00001d010596_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:121427947:121428690:1 gene:Zm00001d010596 transcript:Zm00001d010596_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence

MDPSGPAGAGAGPSSAAGAGGDDAHAHAPPQQHQIQPLAQAQAQPQPHQLSRYESQKRRD
WNTFLQYLQNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHAAGCAHFGQPSPPAPCPCP
LHQAWGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLRDVRDAQAKARGIPYEKKSR
KRKQPPPAAAAGEAAAASSSSAAAARVAAGSAGDGSSASGSAAAKAAPTTAQGSAAADAA
TSTSRVQ

Transcript Sequence

Transcript ID

Zm00001d010596_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:121427947:121428690:1 gene:Zm00001d010596 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence

ATGGATCCCTCGGGGCCAGCCGGCGCCGGGGCCGGGCCGTCCTCGGCGGCGGGGGCGGGC
GGCGACGACGCGCACGCGCACGCGCCGCCGCAGCAGCACCAGATCCAGCCGCTTGCTCAG
GCGCAGGCGCAGCCGCAGCCGCATCAGCTGAGCAGGTACGAGTCGCAGAAGCGGCGGGAC
TGGAACACGTTCCTGCAGTACCTGCAGAACCACCGGCCGCCGCTGACGCTGGCGCGGTGC
AGCGGCGCGCACGTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGCAAGACCAAGGTG
CACGCCGCCGGGTGCGCCCACTTCGGCCAGCCCAGCCCGCCGGCGCCGTGCCCGTGCCCG
CTGCACCAGGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTGCGCGCCGCGTACGAG
GAGAGCGGCCACGCGCCCGAGTCCAACCCCTTCGCCGCCCGCGCCGTGCGGATCTACCTC
CGCGACGTCCGCGACGCGCAGGCCAAGGCGCGGGGCATACCCTACGAGAAGAAGAGCCGC
AAGCGCAAGCAGCCGCCGCCGGCCGCCGCTGCGGGGGAGGCGGCGGCGGCGTCGTCGTCT
TCGGCCGCGGCAGCACGGGTGGCCGCCGGGAGCGCCGGGGACGGGTCGTCCGCCAGTGGC
AGCGCGGCGGCGAAAGCTGCACCGACCACCGCCCAGGGAAGCGCCGCTGCTGATGCAGCG
ACCAGCACATCCCGAGTACAGTAG