Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010590_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:121144352:121148411:-1 gene:Zm00001d010590 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer membrane OMP85 family protein
Sequence	ATGGCAGCCGCCGCCGATTCTGCCTCCGACCAAAACCCTAAGGACGCCGAGCGGCACGTG CTCACCGCCGAATCCGACGCCGATTTCTCCGAGGAGGACTACGACGAGGATGGGGAGGAG GAATACGAGGAGGAGGAGGAGCTGGACGGGCCGGCGGCGGCGGCGGCGGAGCGGGAGCGG ATGCAGTCCGTGTTACGGAGGCTGTCATCCGACCCCGTGGGCATCCGCGTCCACGACGTG ATCATCAAGGGCAACACCAAGACGCAGGACGAGCTCATCGAGGCGGAGGTCGCCGAGCTG CTCCGCGCCGCCCCCACCGTGCAGGACCTGCTCCGCGCCGCCAGTGTCGCCACTGCGCGG CTGCACGATCTCGACATCTTCGACGCCGTCAAGATCACGCTCGACGCCGGGCCGCCCGAG CTGCCTGGCACCACCAACGTCGTCATCGAGGTCGTCGAGGTGGCCAACCCCCTCACTGGC ACCGCCGGCGTCTATTCGAAGCCCGAAGCAAGATCTTGGTCGCTGGAAGGGTCACTTAAG TTGAAGAACTTGTTTGGCTATGGTGACATCTGGGATGCATCAGGATCCTTTGGTTGGGAC CAAACAACAGAGGTTGGTGTTGGAGTCTGCCTACCGAGGTTTAAATCAATACCAACACCA TTGATGGCTCGGGCATCTTTGTCATCACAAGATTGGCTGAAGTTTTCATCATACAAGGAG CGCCTACTTGGCCTTTCATTTGGTTTGCTGTCAACAAGGAACCATGACTTGTCATACAAC CTTGCGTGGCGTACCTTAACTGATCCATCACGTGTCTCATCAAAGGCCATAAGGAGGCAG TTAGGGCATAACCTTCTTTCTGCATTGAAGTACACATACAAGATTGATAAGAGGGATTCA CATCTTAGGCCAACGAAAGGATATGCGTTTCAGTCAACTTCTCAAGTTGGTGGTCTATGG AATAGCAAAGGATTGAGATATTTCCGGCAGGAGTTCGATGTACGTGGTGCTGTGCCTTTG GGATTTTATAGTGCTGCTCTCAACGTTGGTGTAGGAGCGGGTGTCATTTTACCGCTTGCA GGGGGATTCATGAATTCGACTTCATCAGTGCCAGAGAGGTTTTATCTTGGAGGTAATTCT TCTCCAGTGTGCAGCTTGGGCGGACCGTCATCTCTGCTGGGTTTCAGATTAAGGGGAGTT GGCCCAACAGAGGCGCGGAGGCATGTCCTTAATAACTCGGAGAGTGGCTCGGCTGACCCT GGAAGGGATTACTTGGGAGGTGATCTGGCCGTGTCTGCCTTCGCTGACCTTTCTTTTGAT CTGCCCCTCAAGATATTCAGAGACGCTGGAATCCATGGCCACGCATTCCTTACTGCTGGA AACCTTGCGAAACTGTCGGAGGGTGAGTACAAGAACTTTTCGGCTTCTGAATTTCGGCAA ACGTTCCGGAGCTCTGCTGGCGTTGGGATTATTTTGCCTACCAAACTTTTCCGGGTAGAG GTGAACTATTGCCGCATCCTAAAGCAAGCTGAGCATGACAGCGCGAAGACTGGAATCCAG TTCAGCTTTTCCTCGCCCATGTAG

Peptide Sequence

PEP ID	Zm00001d010590_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:121144352:121148411:-1 gene:Zm00001d010590 transcript:Zm00001d010590_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer membrane OMP85 family protein
Sequence	MAAAADSASDQNPKDAERHVLTAESDADFSEEDYDEDGEEEYEEEEELDGPAAAAAERER MQSVLRRLSSDPVGIRVHDVIIKGNTKTQDELIEAEVAELLRAAPTVQDLLRAASVATAR LHDLDIFDAVKITLDAGPPELPGTTNVVIEVVEVANPLTGTAGVYSKPEARSWSLEGSLK LKNLFGYGDIWDASGSFGWDQTTEVGVGVCLPRFKSIPTPLMARASLSSQDWLKFSSYKE RLLGLSFGLLSTRNHDLSYNLAWRTLTDPSRVSSKAIRRQLGHNLLSALKYTYKIDKRDS HLRPTKGYAFQSTSQVGGLWNSKGLRYFRQEFDVRGAVPLGFYSAALNVGVGAGVILPLA GGFMNSTSSVPERFYLGGNSSPVCSLGGPSSLLGFRLRGVGPTEARRHVLNNSESGSADP GRDYLGGDLAVSAFADLSFDLPLKIFRDAGIHGHAFLTAGNLAKLSEGEYKNFSASEFRQ TFRSSAGVGIILPTKLFRVEVNYCRILKQAEHDSAKTGIQFSFSSPM

Transcript Sequence

Transcript ID	Zm00001d010590_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:121144352:121148411:-1 gene:Zm00001d010590 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer membrane OMP85 family protein
Sequence	AGCACGGCTTGCTAAACACGCAGAAAAGAAAAGCCGTTCTCCCTCCGTTTCCCCAAACCC CAAGGTCCCCAACCATGGCAGCCGCCGCCGATTCTGCCTCCGACCAAAACCCTAAGGACG CCGAGCGGCACGTGCTCACCGCCGAATCCGACGCCGATTTCTCCGAGGAGGACTACGACG AGGATGGGGAGGAGGAATACGAGGAGGAGGAGGAGCTGGACGGGCCGGCGGCGGCGGCGG CGGAGCGGGAGCGGATGCAGTCCGTGTTACGGAGGCTGTCATCCGACCCCGTGGGCATCC GCGTCCACGACGTGATCATCAAGGGCAACACCAAGACGCAGGACGAGCTCATCGAGGCGG AGGTCGCCGAGCTGCTCCGCGCCGCCCCCACCGTGCAGGACCTGCTCCGCGCCGCCAGTG TCGCCACTGCGCGGCTGCACGATCTCGACATCTTCGACGCCGTCAAGATCACGCTCGACG CCGGGCCGCCCGAGCTGCCTGGCACCACCAACGTCGTCATCGAGGTCGTCGAGGTGGCCA ACCCCCTCACTGGCACCGCCGGCGTCTATTCGAAGCCCGAAGCAAGATCTTGGTCGCTGG AAGGGTCACTTAAGTTGAAGAACTTGTTTGGCTATGGTGACATCTGGGATGCATCAGGAT CCTTTGGTTGGGACCAAACAACAGAGGTTGGTGTTGGAGTCTGCCTACCGAGGTTTAAAT CAATACCAACACCATTGATGGCTCGGGCATCTTTGTCATCACAAGATTGGCTGAAGTTTT CATCATACAAGGAGCGCCTACTTGGCCTTTCATTTGGTTTGCTGTCAACAAGGAACCATG ACTTGTCATACAACCTTGCGTGGCGTACCTTAACTGATCCATCACGTGTCTCATCAAAGG CCATAAGGAGGCAGTTAGGGCATAACCTTCTTTCTGCATTGAAGTACACATACAAGATTG ATAAGAGGGATTCACATCTTAGGCCAACGAAAGGATATGCGTTTCAGTCAACTTCTCAAG TTGGTGGTCTATGGAATAGCAAAGGATTGAGATATTTCCGGCAGGAGTTCGATGTACGTG GTGCTGTGCCTTTGGGATTTTATAGTGCTGCTCTCAACGTTGGTGTAGGAGCGGGTGTCA TTTTACCGCTTGCAGGGGGATTCATGAATTCGACTTCATCAGTGCCAGAGAGGTTTTATC TTGGAGGTAATTCTTCTCCAGTGTGCAGCTTGGGCGGACCGTCATCTCTGCTGGGTTTCA GATTAAGGGGAGTTGGCCCAACAGAGGCGCGGAGGCATGTCCTTAATAACTCGGAGAGTG GCTCGGCTGACCCTGGAAGGGATTACTTGGGAGGTGATCTGGCCGTGTCTGCCTTCGCTG ACCTTTCTTTTGATCTGCCCCTCAAGATATTCAGAGACGCTGGAATCCATGGCCACGCAT TCCTTACTGCTGGAAACCTTGCGAAACTGTCGGAGGGTGAGTACAAGAACTTTTCGGCTT CTGAATTTCGGCAAACGTTCCGGAGCTCTGCTGGCGTTGGGATTATTTTGCCTACCAAAC TTTTCCGGGTAGAGGTGAACTATTGCCGCATCCTAAAGCAAGCTGAGCATGACAGCGCGA AGACTGGAATCCAGTTCAGCTTTTCCTCGCCCATGTAGGAACTTGCCATGGCAGCCGAAA CAGCTGCACTTTCCTCTGTAGACTTGCATTTCTTCCCGTTCTTTTCATGCTGAAGCAATT GAAGAGGTTATTTACGTGCTCCCTTTTCTTGTGACGCTTGTTCATTGACACGAGGAGCTG CTCCTTTTTTTTGGTGTCTTCAGGAGATGGGTTTATTATTTGCTGTTTTTGACCTCACGA GGGATTTGTCCTCGCACAACTCAAATACCGATGCTGTGGCTACACAATGGTGGATAGAAT AATATTTTGGCCCATAATGTTGTATAATTCATACCACATCA