Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010558_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:120340485:120345629:1 gene:Zm00001d010558 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 2D
Sequence

ATGCTGCAGCGTGCGGCTAGCAACGCCTACTCCTGGTGGTGGGCATCACACATCCGCACC
ACCCAGTCCAAGTGGCTTGAAATAACTGTCGTTGAGATGGAGGACAGAGTAAAGGCCATG
CTCAACCTCATTGGGGCCGATGGCGATTCGTTCAGCAAGAAGGCAGAGCTCTATTTCAAA
AGCCGGCCAGAGCTCATCAATCACGTGGAGGAGATGTTCAGATCCTATCAGGCCCTTGCC
GACAGATATGACCGGATATCCAGTGAGCTGCACAAGGCCAACCACACCATTGCCACCGTG
TTTCCGGATCAGGTGCAGTTCTCAATGGAAGAGGGGGATAGTGAGGGGTTTTCTAAGGCA
ATAGGTGGGATTGATCTCAGCAACTTCAAGTTCCCTGCACTGGAAGGCTTGTCCGTGGGC
TCAGGCTCACAGAGCGCAAACAGGGGCACCAGTCCGGTCCCCAAGAGGGGGGCCCAGGCA
CACCGGAAGGTCACCCCCAACATGACCAAGGAGAAGGCACAGGAGGAGATAGACAAGCTG
CAGAAACAGATCCTGGCATTACAGACTGAGAAAGAGTTCTTGAAGACCTCTTACGACAGC
GCACTAGGAAAGTATCTAGACATTGAGAAACAGGTGGCCCAATTGCAGGATGAGGTCTGC
AATTTGCAGGATGCTTTCAGCACCGGTGTAGCCATTGAAGACAATGAAGCTCGGGCATTG
ATGGCTGCACAAGCCATTATGTCATGTGAGGATACGTTGGTGAATTTACAGGACCAGAAA
AACAAATTGACTGAAGAGGCGGAGGTGGAGCTCCGACGAGCCAATGAGGCAATTGAAAAG
CTGAAAACCTTCAAGAACGAATGTGGACTGCCTCATGTGCAAATGGATGGGCATGATCAC
CATGAAATAGAACTGGTCCATGCACTGCCCTTCGAGGATTCTGATGATTCTGCGCTGAAT
GGAAGCAGGCTTGACCTCCAGGAAATATGTCAAAGAGTCAAAGAAATAATTGAATCTTAC
CCTGAGCTATCAGTTGCGGAATTAGCAGATAAAGTTGACCGACTTGTGGAAAAGGTGATC
AGCCTTGAACTTGCCACTACTTCACAGAATGCTCAGATCGATAGAATGAAGACTGAGATA
GATGGCCTTCACGAGCGCCTGCATGCTTTGGAGCAAGACAAGGTGGCTTTGGTTGTTGAT
TCTAGTAACTTGGCTGACGGGTTGAGGAAAGTTGAAGAAATGCTGCAAGAAGTACAACAA
ATTTGGAAGTCCGTACAAAATGGTTTCGAGAACATTTGTAAACAAATGACTGAAGCCGCC
CATGAACTAACTGAATTCGTCGAAACATTACATGCTCCTGAGCAAGAAAGCAGTGACTTC
GTGGATTCATCGCGAGACTCCAAACACGATACTTCTCTGGAAGATTACTCGGGACTAACA
AGTCTGTCTGTGCAAAACGAGCCATCCAAATCTTTACATGACACTACAAATGAAACTGAT
AAACATGAAGAAACCTTAGAAGATCAAGCCCAAAAAGAGCTAGTTCCAAAAGAATCTGAA
GTTGAGGGTAAGATTCTATTAGAAGACTATGCATCTGTACTTCAGAGCTACAAAGATACA
GAGCAGAAGCTTTCAGAAATTGAGAAGATAAATAAAGATTACCATCTTGAGGCAATGTCA
GAACTGAAGGAACTTAAGAGTGCCAATGCAACAAAAGATGAGGAGATCCACTCGCTTAGG
CGCATGCTACGTTCTTTGCGGAAAAAGATGAGTGCTTCTATTATTGAGAGTATAGAGAAG
GCAGAAGAAACATCCAAGATAAGCAGCAGTCCTACTACAGAAGACATAGAGATTGCCAAG
TCAGAAGAAACATCCAAGATAAGCGCCACTCCAAGTACAGAAGACAAAGAGATTGCTGAG
ATAGAGGAATACATTAAGCAATGGCAAATTAATGACTCACTGGCTTCTTCGGTTGCAGAG
GAGAAATTTAGAGCAGAAATTGATAGGGTATTAGGGGAGAACTTGGACTTCTGGTTGAGA
TTTAGCACATCATATCATCAAATACGGAATTTCCAAATATGCTTTGACATGTTGAAAACT
GAGATGTACAGATTGACTGATGAACAGGAAGACGGGGGAAATTACGGCTTTGCTGGTAGT
TATCAGGTAGCAAAGCTGGAATCAGCAGTACTAGAAAAGAAATTCAGGGATCTAAATACA
GATCTTCAAGTTTGGATTGAAAAGAACGTGCTATTGAAAGGAGAGGTAGAAAACAGATTT
TCGTCACTATGCTGCATACAAGAAGATATATCAAAGATCACAACTCTGGATAAATGTGAT
GAAATTCACTTCAACCCTTTTCAAGCTGCAAAATTCCAAGGAGAGGTGCTTAATATGAAA
CAAGAGAACAACAAAGTTGCTAAGGAGCTAGAAGCTGGGCTGGATCATGTAAGAGGTCTC
CAAGTGGAGGTTGGAAGGGTGCTCTTGAAGCTCAGAGAGAATCTCGAGGTATCTCTAGAA
AGAAGCCATCGAGCCCAACAAAACTTCCGGAACCTGTCAACAAAAGCTGGAATTCCCCTT
AGAACTTTTCTGTTTGGCTCAAAGACAAGGAAATCATCATTCTTTTCGTGCATGAGTCCT
GGGGTGCATAAGTAA

Peptide Sequence

PEP ID

Zm00001d010558_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:120340485:120345629:1 gene:Zm00001d010558 transcript:Zm00001d010558_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 2D
Sequence

MLQRAASNAYSWWWASHIRTTQSKWLEITVVEMEDRVKAMLNLIGADGDSFSKKAELYFK
SRPELINHVEEMFRSYQALADRYDRISSELHKANHTIATVFPDQVQFSMEEGDSEGFSKA
IGGIDLSNFKFPALEGLSVGSGSQSANRGTSPVPKRGAQAHRKVTPNMTKEKAQEEIDKL
QKQILALQTEKEFLKTSYDSALGKYLDIEKQVAQLQDEVCNLQDAFSTGVAIEDNEARAL
MAAQAIMSCEDTLVNLQDQKNKLTEEAEVELRRANEAIEKLKTFKNECGLPHVQMDGHDH
HEIELVHALPFEDSDDSALNGSRLDLQEICQRVKEIIESYPELSVAELADKVDRLVEKVI
SLELATTSQNAQIDRMKTEIDGLHERLHALEQDKVALVVDSSNLADGLRKVEEMLQEVQQ
IWKSVQNGFENICKQMTEAAHELTEFVETLHAPEQESSDFVDSSRDSKHDTSLEDYSGLT
SLSVQNEPSKSLHDTTNETDKHEETLEDQAQKELVPKESEVEGKILLEDYASVLQSYKDT
EQKLSEIEKINKDYHLEAMSELKELKSANATKDEEIHSLRRMLRSLRKKMSASIIESIEK
AEETSKISSSPTTEDIEIAKSEETSKISATPSTEDKEIAEIEEYIKQWQINDSLASSVAE
EKFRAEIDRVLGENLDFWLRFSTSYHQIRNFQICFDMLKTEMYRLTDEQEDGGNYGFAGS
YQVAKLESAVLEKKFRDLNTDLQVWIEKNVLLKGEVENRFSSLCCIQEDISKITTLDKCD
EIHFNPFQAAKFQGEVLNMKQENNKVAKELEAGLDHVRGLQVEVGRVLLKLRENLEVSLE
RSHRAQQNFRNLSTKAGIPLRTFLFGSKTRKSSFFSCMSPGVHK

Transcript Sequence

Transcript ID

Zm00001d010558_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:120340485:120345629:1 gene:Zm00001d010558 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 2D
Sequence

CGGCCCTCTTCTCTTCCCCGGGCCCCCCACGGCTCGGCCTGACGCCACCACGATTTTCTC
CGCACGGCGCACCCTCGCCGCGTCTCCGCTCCACCCACCACGTTGCGGCAAGGGTGCGGC
CTACGACGCGGAGTAGGAAGAGGAGGGAGAAAGGGAGGCCGTGACGCCGGCTGGCTATGC
TGCAGCGTGCGGCTAGCAACGCCTACTCCTGGTGGTGGGCATCACACATCCGCACCACCC
AGTCCAAGTGGCTTGAAATAACTGTCGTTGAGATGGAGGACAGAGTAAAGGCCATGCTCA
ACCTCATTGGGGCCGATGGCGATTCGTTCAGCAAGAAGGCAGAGCTCTATTTCAAAAGCC
GGCCAGAGCTCATCAATCACGTGGAGGAGATGTTCAGATCCTATCAGGCCCTTGCCGACA
GATATGACCGGATATCCAGTGAGCTGCACAAGGCCAACCACACCATTGCCACCGTGTTTC
CGGATCAGGTGCAGTTCTCAATGGAAGAGGGGGATAGTGAGGGGTTTTCTAAGGCAATAG
GTGGGATTGATCTCAGCAACTTCAAGTTCCCTGCACTGGAAGGCTTGTCCGTGGGCTCAG
GCTCACAGAGCGCAAACAGGGGCACCAGTCCGGTCCCCAAGAGGGGGGCCCAGGCACACC
GGAAGGTCACCCCCAACATGACCAAGGAGAAGGCACAGGAGGAGATAGACAAGCTGCAGA
AACAGATCCTGGCATTACAGACTGAGAAAGAGTTCTTGAAGACCTCTTACGACAGCGCAC
TAGGAAAGTATCTAGACATTGAGAAACAGGTGGCCCAATTGCAGGATGAGGTCTGCAATT
TGCAGGATGCTTTCAGCACCGGTGTAGCCATTGAAGACAATGAAGCTCGGGCATTGATGG
CTGCACAAGCCATTATGTCATGTGAGGATACGTTGGTGAATTTACAGGACCAGAAAAACA
AATTGACTGAAGAGGCGGAGGTGGAGCTCCGACGAGCCAATGAGGCAATTGAAAAGCTGA
AAACCTTCAAGAACGAATGTGGACTGCCTCATGTGCAAATGGATGGGCATGATCACCATG
AAATAGAACTGGTCCATGCACTGCCCTTCGAGGATTCTGATGATTCTGCGCTGAATGGAA
GCAGGCTTGACCTCCAGGAAATATGTCAAAGAGTCAAAGAAATAATTGAATCTTACCCTG
AGCTATCAGTTGCGGAATTAGCAGATAAAGTTGACCGACTTGTGGAAAAGGTGATCAGCC
TTGAACTTGCCACTACTTCACAGAATGCTCAGATCGATAGAATGAAGACTGAGATAGATG
GCCTTCACGAGCGCCTGCATGCTTTGGAGCAAGACAAGGTGGCTTTGGTTGTTGATTCTA
GTAACTTGGCTGACGGGTTGAGGAAAGTTGAAGAAATGCTGCAAGAAGTACAACAAATTT
GGAAGTCCGTACAAAATGGTTTCGAGAACATTTGTAAACAAATGACTGAAGCCGCCCATG
AACTAACTGAATTCGTCGAAACATTACATGCTCCTGAGCAAGAAAGCAGTGACTTCGTGG
ATTCATCGCGAGACTCCAAACACGATACTTCTCTGGAAGATTACTCGGGACTAACAAGTC
TGTCTGTGCAAAACGAGCCATCCAAATCTTTACATGACACTACAAATGAAACTGATAAAC
ATGAAGAAACCTTAGAAGATCAAGCCCAAAAAGAGCTAGTTCCAAAAGAATCTGAAGTTG
AGGGTAAGATTCTATTAGAAGACTATGCATCTGTACTTCAGAGCTACAAAGATACAGAGC
AGAAGCTTTCAGAAATTGAGAAGATAAATAAAGATTACCATCTTGAGGCAATGTCAGAAC
TGAAGGAACTTAAGAGTGCCAATGCAACAAAAGATGAGGAGATCCACTCGCTTAGGCGCA
TGCTACGTTCTTTGCGGAAAAAGATGAGTGCTTCTATTATTGAGAGTATAGAGAAGGCAG
AAGAAACATCCAAGATAAGCAGCAGTCCTACTACAGAAGACATAGAGATTGCCAAGTCAG
AAGAAACATCCAAGATAAGCGCCACTCCAAGTACAGAAGACAAAGAGATTGCTGAGATAG
AGGAATACATTAAGCAATGGCAAATTAATGACTCACTGGCTTCTTCGGTTGCAGAGGAGA
AATTTAGAGCAGAAATTGATAGGGTATTAGGGGAGAACTTGGACTTCTGGTTGAGATTTA
GCACATCATATCATCAAATACGGAATTTCCAAATATGCTTTGACATGTTGAAAACTGAGA
TGTACAGATTGACTGATGAACAGGAAGACGGGGGAAATTACGGCTTTGCTGGTAGTTATC
AGGTAGCAAAGCTGGAATCAGCAGTACTAGAAAAGAAATTCAGGGATCTAAATACAGATC
TTCAAGTTTGGATTGAAAAGAACGTGCTATTGAAAGGAGAGGTAGAAAACAGATTTTCGT
CACTATGCTGCATACAAGAAGATATATCAAAGATCACAACTCTGGATAAATGTGATGAAA
TTCACTTCAACCCTTTTCAAGCTGCAAAATTCCAAGGAGAGGTGCTTAATATGAAACAAG
AGAACAACAAAGTTGCTAAGGAGCTAGAAGCTGGGCTGGATCATGTAAGAGGTCTCCAAG
TGGAGGTTGGAAGGGTGCTCTTGAAGCTCAGAGAGAATCTCGAGGTATCTCTAGAAAGAA
GCCATCGAGCCCAACAAAACTTCCGGAACCTGTCAACAAAAGCTGGAATTCCCCTTAGAA
CTTTTCTGTTTGGCTCAAAGACAAGGAAATCATCATTCTTTTCGTGCATGAGTCCTGGGG
TGCATAAGTAACACAGTGGTTCAAAGGTTGGGCGTAGATGATTACTGACAAATTGTTTTT
TGACATTTAATCATAAAGAGATCTCAGTGTACATGACAATTCATATGTGATAATTGCCTT
TAGGCCTTAAATGTAAAAGATCCTCATCTCCTAAATCTTATTTGATTTGTGATTGTCCAC
TTATTCTTGCTTTGGTACATTGTCTATATGATATTCATTTCGGAACTAAATTTGATGGAA
ATATTATAATGTATTAATATGAAATTGTTTACATTGTTGAAGGTATGGGAAGAAACTCTG
TTTGTGCCCATGTTTCTCAATATCTTCAGTTGACAAAACTACTGAACTGGTATTGCATTG
ATGATGAGTACTCATTTATAGACATGGTGCTGCAACTGTTTTGTAGTTGATCTACTAAGA
CAAAGTCGCATCTTGTCGTTTGAACCTTTTGGGATCTTTAATGATATGGTGGGAGAGAAC
ATAACTAACAATGTTATGGATAAAATGAAACCTCATGTTGTTTGTTCTGGTGCAAAACCT
AAATCTTTCTAAAATAAGAAGTGCTGGTATGCATAATATGTTTTTCAGTTGGTGAGATTC
TTTTCAATAACCATAGAAAAGTCTTTTCAGGTAATACAATCTTGTAGAAGCATAATGGTC
CCAACAGCAATCTTACTTTCAGATTGCATTGCATTTCTGTGCATGGCGTCGATAGAATGG
CAAGATGCAAGTGGTGTTGGTTCCAATTTCTTTTGAGTTTTTATGATTTTATCTATGTCT
ACTAACAGATTTGATTTAATTTTACACTTGGTTATTGTAATAAGGTAAAGTTTCTCCACT
TATAGCCTTGAGCTTTCAACACTGGAAACACTATTTTTGAGATTGGAAAGATAGGACTGC
TGCCGTCAGGGCTTTCGTGGAAGGAGGTTACCAATATCTTACATTAGACACACTTGATCA
GGCATGTTTTATATTAACGCTTTAGAAAGAAATAAAAAACAAGTATTACTTCGGTTCTTG
AATATTTGTTGCCCGCTAGTTCATTTTTTTTAAGTAAAGGTACTGTAGGAAGCTCCTACA
GTAATATTATTAAATCAAAGAACTGAGTTTGGGGAGAGAGGAAAAATACAAAGAAATGGA
AGTAGGGGGAGCAGAGGGGGAAGAGTTACAGCCCTAAATTGAGTAACCAAGCTGTAATAT
CTTCCTTAAGATTAGGCTTGACTCGATGGCATAATAAGTCAATTTCACTCCTAAACATAG
CCTTGCACTCAGAAACCAAAGGGGGGATTTCGCTGAAGATCCAATTGTTTCTGCACCTCC
AGATGCACCACGTCATGATGGTAATAATTTCCAACCTCCAAGGAACTTGCAAGCGTCTTC
TAATTCTCATTAAGGTATGTAGAAGATCCGTAGAACACGGCGGCAGGAAGCCCAAAAGTA
GCCAACATCTCCTAGCAAAGTTGCATCTGAAGAAGAGATGAATATGCGTTTCTTCAATCT
GGAGTATACAGTTGTCGCAGGTGAAGGAGTCTAAAGGCATTGAACGTCGTCTGAGAAGGG
AGCGGGTATTCAATCTATTTTTGAGCAATAACCAGAAGAATACTTTGTGTTTAGGTTGAC
ATTTAGATTTCCAAAACCAAGAGAAGAGAGAGAGCGACTGATGGGTGCCAATCAAGTGGG
CATAGACCTTCTGAGAAGAAAACCGATTGGAAGAGGCACTGCATCGCCAAATATCATTGT
GATCAAGCAACTGTAGATTACCAAGGGTGTCCTGAAGTGAGAGAAGTTGCTCGAACGCTT
CAGCAGAAAGGGGAATGTGGAACAGTTCATTCGGGGAAGCCAGCCGCGCTTGACTAATGT
TGATCTCCTTGACAGAGGCAAAAGACGAAAGCTCCGGGAATTTTTCAGATATTCGCTGCC
CATTCCATCGATCATGCCAAAGGAGAGTAGATTTACCATTTCCAATCTCCACTTGGGCAA
TTTCCTTAAAAGAATCTTGGATTTTGAGAATATCTTTCCACCAAAATGAGCCAACTGGTT
TAGCTGGGGGCAGAGAGTTGTTGTAGTGATTGTCCCAGATAATGTTAACCCATGGGATGT
TGACTCTATTAAAGAATTTATAGAAACATTTCATAAGGAGCGCTTTATTCTGCCACTCAA
GGTTGATGACTCCAAGTCCCCCTGAGTTTTTGGCCTGCAGACAGATTTCCAAGCAACTTG
AGGAGG