Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010556_T016
CDS Infomation	cds chromosome:B73_RefGen_v4:8:120216214:120222701:1 gene:Zm00001d010556 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tudor/PWWP/MBT superfamily protein
Sequence	ATGGTTGAGGAACCTGTGATTAATGAAGTGCATCCTACTCAAGATAAGCCCAAAAGGGGC AGGGGGAGACCTCGGAAACAAAAACCTGGTGGTGACCAGGTGGTGATGGAGAAAAGGAGC ATATCTAATCAGGTCAATGATACTAGCTACAATGAGAAACAAGTGGGTATGGACTTTGAT AACTATGGCAACCTACAGAACAAGAACAAAAGAAACTTTGAATCATTTGAAGATTCAGAG AAGTCATCAGCTCCAACTGGTGGTAGTTCTTTCAAGATTGGTGAGTGTATTCGGCGAGCT GCAAGCCAGCTGACAGGATCTCCGTCCATTATGAAGGCTCAGAATGCTGCTGAAGGAGAG AATGGGGAATTTGATATCTTTAGTGATGATGCTGGTGATGAACTTACTGTAGAGAAACGA GCAAAAAGGAGAAGTCTGCACAGGAATCACACTGCAGATCCCAAGGAATTACTATCACAG CTATGCTTGGTTGCAACAGAGCCAATGAATGGATATAATTTCTCAGTAATGATAATCAGT TACTTCAGTGATTACAGAAACTATATTGTTTCTACTACTACTGAAGCAAACATCGTTGAT AAAGGTACATCTAGGAGAGGGAGGAAGAGAAAAGAAGTTTTACCTTCTCCTGATGTAGAG ACAACAGATCATATGCAGGACTCGTATTGGTCCGGATTGAGCTTGCATAATCACCCAATC CATGACCTCAGAAAAGAGAGTCCCACTACAAGGCCAAGACGTAGGCGGAGATCCTCAAGT CATGCATATGTACCTTTGTCAGAACTTGGGGAGCCAGTACCTAAAAAACAGATACAAGTG ATGGAAAGATCTATCATCCATGTTGACGAGAAGATGATTGATGAGTTGAAGCCCACTGCA CTTGTTTTGAGCTTTGCCAGGTCAGCTTCTATTCCTTCAGAATTGGATCTTGTTAAGATG TTCAGTCGCTTTGGTCCACTGAAAGAAAGGGAGGCAGAAGTACACAGGGAAACAAATACT GTTAAAGTTGTCTTCAAGAAACGTGCCGATGCTGAAAGGGCTTTTAGCGCTGCTGGCAAG TATGGCACTTTTGGACCTTCGCTTCGAAGTTACCGTCTTGTCAGTATGCCATTTTCTCTA GAGACACAGTCAGCAAACAATCCTGTGAAACATCCTGAAAATCATGGCATGGAGATTCCA GGTTCAAATCAGTCCGAAGCTCCTAAGGATTCCATGGAAGTTGACCTGGTACAGAAAACA GATGAAGTAGAAGTTGCAGGAGAACCGTCGTCTGAAGAAGTTGAGACTGTGAGGCAAATA TCTCAAGTGCAAGCTGCAGACAGTACATTTGTCAGTCAAGACAGGTTTGATGAAGCTGGA AATATTGACGCTGAGCTAATTGACCATGTTAATCAAATTGGGAAAGCTGCACAAGCTGCA TCTGTATCTGAAGAGTCACGAGATGTTGAGCAAGTTTACACTCAAAAGGAAGTGTCAGCC AATGATCTACCCACAGAGACAGAAATCTTAAATTCTGATGCTATAACAAAAGAGTTGCCT CAGAATGCTCCAGATAATGTGGAAACTGATATAGTCGAAGATCCAAAACAGAGTCACAAT TCAAGAGATAATGCCGTATTTGAAGCAGTCATTGAAGCACCGAGTACTGCACAAGATCAT ACAGAGGAGGATACTGGGAATGCAGTTCCAGAAGAGCCCATGGTATCTCCTGAGTTACAA AGTCAAACCCCTGGTGATCTACCCACAGAGACAGAAACCTTACATTCTGATGCTATATTA AAAAAGTTGCCTCAGAATGCTCCAGATAATATGCAAACTGATATAGCCGAGGATCCAAAA CAGAGTCACAATTCAGGAGATAATGCCGTATTTGAAGCAGTCACTGAAGCACCGAGTACT GCACAAGATCATACTGAGGATGATACTGGGAATGAAGTTCCAGAAGAGCACATGGTATCT CTTGAGTTACAAAGTCAAACCCCTGGTGATCTACCCACAGAGACAGAAACCTTACATTCT GATGCTATAGTAAAAGAGTTGCCTCATAATGCTCCAGATAATATGCAAACTGATATAGCC GAAGATCCAAAACAGAGTCACAATCCAGGAGGTAATGCCGTATTTGATGCAGTCACTGAA GCAAGAAGTACTACACAAGATCATACTGAGGATGATACTGGGAATGAAGTTCCAGAAGAG GACATGGTATCTCTTGAGTTACAAAGTCAAACCCCTGGTGATCTACCCACAGAGACAGAA ACCTTATATTCTGATGCTATAGTAAAAGAGTTGCCTCATAATGCTCCAGATAATCTGCAA ACTGATATAGCCAGAGATCCAAAACAGAGTCACAATCTAGGAGATAATGCTGTATTTGAA GCAGTCACTGAAGCACCAAGTACTGCACAAGATCATACTGAGGATGATACTGGGAATGAA GTTCCAGAAGAGCACATGGTATCTCCTGAGTTACAAAGTCAAACCCCTGGTGATCTACCC ACAGAGACAGAAACCTTACATTCTGATGCTATGATAAAAGAGTTGCCTCAGAATGCTCCA AATAGTATGCAAACTGACATAGCTGAAGATCCAAAACAGAGTCACAATCCAGGAGATAAT GCCGTATTTGAAGCAGTCACTGAAGCACCAAGTACTGCACAAGATCATACTGAGGATGAT ACTGGTAATAAAGTTCCAGAAGAGCACATGGTATCTCTTGAGTTACAAAGTCAAACCCCT GGTGATCCACCCACAGAGACAGAAACCTTACATTCTGATGCTATAGTAAAAGAGTTGCCT CATAATGCTCCAGATAATATGCAAACTGATATAGCGGAAGATCCAAAACAGAGTCACAAT CCAGGAGATGCTGTATTTGAAGCAGTCACTGAAGCACCAAGTACTGCACAAGATCATACT GAGGATGATACTGGGAATGAAGTTCCAGAAGAGCACATGGTATCTCCTGAGTTACAAAGT CAAACCCCTGGTGATCTACCCACAGAGACAGAAACCTTACATTCTGATGCTATAATGAAA GAGTTGCCTCAGATTGCTCCAGATAATATGCAAGTTGATATAGCTGAACATCCAAATCAG AGTCACAATTCAGGAGATAATGCCGTATTTGAAGCAGTCGCTGAAGCACCAAGTACTGCA CACGATCATACTGAGGATGATACTGGGAATGAAGTTCCAGAAGAGGACATGGTATCTTCT GAGTTACAAGGTCAAACCCCTGGTGAGAAACTAGTGGGGCAATCTGCAACTGAACAGATG GTGGGATCTGAAGATCCAAAGCCGCAAGCCGAAAATTTTGTTGCTGAACCTGTTGTGCTG GGTGCAGTCGGGCAAGTAGAAATTGAACTGGAATCCAAAACTACTGTTGAAGTGTCAGGC GAACAAGGCTATAGTATTGAGCAGACTGTTCAAGTGGAAGCTCTAATTGAAGCGTCAGGT GGACAACTTGAGGTGGGAAGGCAAATTCCAGAAGATGAATCTATTGCTTGTGCAACTACT GAGCACTCTATGGTTGTCGATGAAACTGTGGAGGCAAAAGTGGTACTACTCGATGAGAGT ATAGAGAATAATGCTGCTGTCATAGGAGTAGTCGAGGAGACTGCTGAAGGTGAAACTAAG GAGGAAGCATCAGACGAGAAGGGAAAAATAGAAAATAATGAAGATGCTGACAAATTAGCA CCAGCCGGGAAGGGGAAAATAGAAAATAATGAAATTATAATTGACGCACCAGATGAGAAA ACAGAAAATAAAGCAGATGCTGACACACCAGCTGGGGAGACCAAAGAAGGTGAAATTACA GTAGAGGAAACAGATGAGAAAATAGAATCTAAAGTTACTGCTGAACCTGTAATCGGGGAG ACAACTGAAGGTCAAACTGCAGCTGGAGAACCAGTTGAAGAAGCTAGAACAGCTGAGGAC ATGGTAGAAGATGTTAAGGTGCTAGATGATAAATCTACAGCAGCTGAGAAACCTGTAGAG AATGCCACAGTTGTGGCACATGAGAATTCGACTACAGTTGAGAATACTCTGAAGGATGCG ATTGTCGCGCCACCAGATGCAAATACCACCAACGCCGAAAAAACTGCTATTGGTGCCACA ATTGAAACACAAAATGAGGACGCTCCAGCGGAGAGGACTATAGAGGATACCTCGGTTGAG GCACCAGATGTACAAGCAGGTGCAAGTGAGTAA

Peptide Sequence

PEP ID	Zm00001d010556_P016
PEP Infomation	pep chromosome:B73_RefGen_v4:8:120216214:120222701:1 gene:Zm00001d010556 transcript:Zm00001d010556_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tudor/PWWP/MBT superfamily protein
Sequence	MVEEPVINEVHPTQDKPKRGRGRPRKQKPGGDQVVMEKRSISNQVNDTSYNEKQVGMDFD NYGNLQNKNKRNFESFEDSEKSSAPTGGSSFKIGECIRRAASQLTGSPSIMKAQNAAEGE NGEFDIFSDDAGDELTVEKRAKRRSLHRNHTADPKELLSQLCLVATEPMNGYNFSVMIIS YFSDYRNYIVSTTTEANIVDKGTSRRGRKRKEVLPSPDVETTDHMQDSYWSGLSLHNHPI HDLRKESPTTRPRRRRRSSSHAYVPLSELGEPVPKKQIQVMERSIIHVDEKMIDELKPTA LVLSFARSASIPSELDLVKMFSRFGPLKEREAEVHRETNTVKVVFKKRADAERAFSAAGK YGTFGPSLRSYRLVSMPFSLETQSANNPVKHPENHGMEIPGSNQSEAPKDSMEVDLVQKT DEVEVAGEPSSEEVETVRQISQVQAADSTFVSQDRFDEAGNIDAELIDHVNQIGKAAQAA SVSEESRDVEQVYTQKEVSANDLPTETEILNSDAITKELPQNAPDNVETDIVEDPKQSHN SRDNAVFEAVIEAPSTAQDHTEEDTGNAVPEEPMVSPELQSQTPGDLPTETETLHSDAIL KKLPQNAPDNMQTDIAEDPKQSHNSGDNAVFEAVTEAPSTAQDHTEDDTGNEVPEEHMVS LELQSQTPGDLPTETETLHSDAIVKELPHNAPDNMQTDIAEDPKQSHNPGGNAVFDAVTE ARSTTQDHTEDDTGNEVPEEDMVSLELQSQTPGDLPTETETLYSDAIVKELPHNAPDNLQ TDIARDPKQSHNLGDNAVFEAVTEAPSTAQDHTEDDTGNEVPEEHMVSPELQSQTPGDLP TETETLHSDAMIKELPQNAPNSMQTDIAEDPKQSHNPGDNAVFEAVTEAPSTAQDHTEDD TGNKVPEEHMVSLELQSQTPGDPPTETETLHSDAIVKELPHNAPDNMQTDIAEDPKQSHN PGDAVFEAVTEAPSTAQDHTEDDTGNEVPEEHMVSPELQSQTPGDLPTETETLHSDAIMK ELPQIAPDNMQVDIAEHPNQSHNSGDNAVFEAVAEAPSTAHDHTEDDTGNEVPEEDMVSS ELQGQTPGEKLVGQSATEQMVGSEDPKPQAENFVAEPVVLGAVGQVEIELESKTTVEVSG EQGYSIEQTVQVEALIEASGGQLEVGRQIPEDESIACATTEHSMVVDETVEAKVVLLDES IENNAAVIGVVEETAEGETKEEASDEKGKIENNEDADKLAPAGKGKIENNEIIIDAPDEK TENKADADTPAGETKEGEITVEETDEKIESKVTAEPVIGETTEGQTAAGEPVEEARTAED MVEDVKVLDDKSTAAEKPVENATVVAHENSTTVENTLKDAIVAPPDANTTNAEKTAIGAT IETQNEDAPAERTIEDTSVEAPDVQAGASE

Transcript Sequence

Transcript ID	Zm00001d010556_T016
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:120216214:120222701:1 gene:Zm00001d010556 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tudor/PWWP/MBT superfamily protein
Sequence	AATCTTAAACTGTTTCAGTCCAGAAAACCTTCTTCATTATATTAAGGAGTTAGCTCTATT TCCTGGCCAAGGAGGTGATCTGTTGGAGTTAGTTATAGCATGTTCTCAACTTACTTCTTT CTATCGATCTAAGGGATGTCCTGAACTTGCATCATTTCAAACTGGCGATGCGTGGGTTGA GGATGGTCTGGATTGTACAGACACTTTGTCCACCCAGAATGTAATGGTTGAGGAACCTGT GATTAATGAAGTGCATCCTACTCAAGATAAGCCCAAAAGGGGCAGGGGGAGACCTCGGAA ACAAAAACCTGGTGGTGACCAGGTGGTGATGGAGAAAAGGAGCATATCTAATCAGGTCAA TGATACTAGCTACAATGAGAAACAAGTGGGTATGGACTTTGATAACTATGGCAACCTACA GAACAAGAACAAAAGAAACTTTGAATCATTTGAAGATTCAGAGAAGTCATCAGCTCCAAC TGGTGGTAGTTCTTTCAAGATTGGTGAGTGTATTCGGCGAGCTGCAAGCCAGCTGACAGG ATCTCCGTCCATTATGAAGGCTCAGAATGCTGCTGAAGGAGAGAATGGGGAATTTGATAT CTTTAGTGATGATGCTGGTGATGAACTTACTGTAGAGAAACGAGCAAAAAGGAGAAGTCT GCACAGGAATCACACTGCAGATCCCAAGGAATTACTATCACAGCTATGCTTGGTTGCAAC AGAGCCAATGAATGGATATAATTTCTCAGTAATGATAATCAGTTACTTCAGTGATTACAG AAACTATATTGTTTCTACTACTACTGAAGCAAACATCGTTGATAAAGGTACATCTAGGAG AGGGAGGAAGAGAAAAGAAGTTTTACCTTCTCCTGATGTAGAGACAACAGATCATATGCA GGACTCGTATTGGTCCGGATTGAGCTTGCATAATCACCCAATCCATGACCTCAGAAAAGA GAGTCCCACTACAAGGCCAAGACGTAGGCGGAGATCCTCAAGTCATGCATATGTACCTTT GTCAGAACTTGGGGAGCCAGTACCTAAAAAACAGATACAAGTGATGGAAAGATCTATCAT CCATGTTGACGAGAAGATGATTGATGAGTTGAAGCCCACTGCACTTGTTTTGAGCTTTGC CAGGTCAGCTTCTATTCCTTCAGAATTGGATCTTGTTAAGATGTTCAGTCGCTTTGGTCC ACTGAAAGAAAGGGAGGCAGAAGTACACAGGGAAACAAATACTGTTAAAGTTGTCTTCAA GAAACGTGCCGATGCTGAAAGGGCTTTTAGCGCTGCTGGCAAGTATGGCACTTTTGGACC TTCGCTTCGAAGTTACCGTCTTGTCAGTATGCCATTTTCTCTAGAGACACAGTCAGCAAA CAATCCTGTGAAACATCCTGAAAATCATGGCATGGAGATTCCAGGTTCAAATCAGTCCGA AGCTCCTAAGGATTCCATGGAAGTTGACCTGGTACAGAAAACAGATGAAGTAGAAGTTGC AGGAGAACCGTCGTCTGAAGAAGTTGAGACTGTGAGGCAAATATCTCAAGTGCAAGCTGC AGACAGTACATTTGTCAGTCAAGACAGGTTTGATGAAGCTGGAAATATTGACGCTGAGCT AATTGACCATGTTAATCAAATTGGGAAAGCTGCACAAGCTGCATCTGTATCTGAAGAGTC ACGAGATGTTGAGCAAGTTTACACTCAAAAGGAAGTGTCAGCCAATGATCTACCCACAGA GACAGAAATCTTAAATTCTGATGCTATAACAAAAGAGTTGCCTCAGAATGCTCCAGATAA TGTGGAAACTGATATAGTCGAAGATCCAAAACAGAGTCACAATTCAAGAGATAATGCCGT ATTTGAAGCAGTCATTGAAGCACCGAGTACTGCACAAGATCATACAGAGGAGGATACTGG GAATGCAGTTCCAGAAGAGCCCATGGTATCTCCTGAGTTACAAAGTCAAACCCCTGGTGA TCTACCCACAGAGACAGAAACCTTACATTCTGATGCTATATTAAAAAAGTTGCCTCAGAA TGCTCCAGATAATATGCAAACTGATATAGCCGAGGATCCAAAACAGAGTCACAATTCAGG AGATAATGCCGTATTTGAAGCAGTCACTGAAGCACCGAGTACTGCACAAGATCATACTGA GGATGATACTGGGAATGAAGTTCCAGAAGAGCACATGGTATCTCTTGAGTTACAAAGTCA AACCCCTGGTGATCTACCCACAGAGACAGAAACCTTACATTCTGATGCTATAGTAAAAGA GTTGCCTCATAATGCTCCAGATAATATGCAAACTGATATAGCCGAAGATCCAAAACAGAG TCACAATCCAGGAGGTAATGCCGTATTTGATGCAGTCACTGAAGCAAGAAGTACTACACA AGATCATACTGAGGATGATACTGGGAATGAAGTTCCAGAAGAGGACATGGTATCTCTTGA GTTACAAAGTCAAACCCCTGGTGATCTACCCACAGAGACAGAAACCTTATATTCTGATGC TATAGTAAAAGAGTTGCCTCATAATGCTCCAGATAATCTGCAAACTGATATAGCCAGAGA TCCAAAACAGAGTCACAATCTAGGAGATAATGCTGTATTTGAAGCAGTCACTGAAGCACC AAGTACTGCACAAGATCATACTGAGGATGATACTGGGAATGAAGTTCCAGAAGAGCACAT GGTATCTCCTGAGTTACAAAGTCAAACCCCTGGTGATCTACCCACAGAGACAGAAACCTT ACATTCTGATGCTATGATAAAAGAGTTGCCTCAGAATGCTCCAAATAGTATGCAAACTGA CATAGCTGAAGATCCAAAACAGAGTCACAATCCAGGAGATAATGCCGTATTTGAAGCAGT CACTGAAGCACCAAGTACTGCACAAGATCATACTGAGGATGATACTGGTAATAAAGTTCC AGAAGAGCACATGGTATCTCTTGAGTTACAAAGTCAAACCCCTGGTGATCCACCCACAGA GACAGAAACCTTACATTCTGATGCTATAGTAAAAGAGTTGCCTCATAATGCTCCAGATAA TATGCAAACTGATATAGCGGAAGATCCAAAACAGAGTCACAATCCAGGAGATGCTGTATT TGAAGCAGTCACTGAAGCACCAAGTACTGCACAAGATCATACTGAGGATGATACTGGGAA TGAAGTTCCAGAAGAGCACATGGTATCTCCTGAGTTACAAAGTCAAACCCCTGGTGATCT ACCCACAGAGACAGAAACCTTACATTCTGATGCTATAATGAAAGAGTTGCCTCAGATTGC TCCAGATAATATGCAAGTTGATATAGCTGAACATCCAAATCAGAGTCACAATTCAGGAGA TAATGCCGTATTTGAAGCAGTCGCTGAAGCACCAAGTACTGCACACGATCATACTGAGGA TGATACTGGGAATGAAGTTCCAGAAGAGGACATGGTATCTTCTGAGTTACAAGGTCAAAC CCCTGGTGAGAAACTAGTGGGGCAATCTGCAACTGAACAGATGGTGGGATCTGAAGATCC AAAGCCGCAAGCCGAAAATTTTGTTGCTGAACCTGTTGTGCTGGGTGCAGTCGGGCAAGT AGAAATTGAACTGGAATCCAAAACTACTGTTGAAGTGTCAGGCGAACAAGGCTATAGTAT TGAGCAGACTGTTCAAGTGGAAGCTCTAATTGAAGCGTCAGGTGGACAACTTGAGGTGGG AAGGCAAATTCCAGAAGATGAATCTATTGCTTGTGCAACTACTGAGCACTCTATGGTTGT CGATGAAACTGTGGAGGCAAAAGTGGTACTACTCGATGAGAGTATAGAGAATAATGCTGC TGTCATAGGAGTAGTCGAGGAGACTGCTGAAGGTGAAACTAAGGAGGAAGCATCAGACGA GAAGGGAAAAATAGAAAATAATGAAGATGCTGACAAATTAGCACCAGCCGGGAAGGGGAA AATAGAAAATAATGAAATTATAATTGACGCACCAGATGAGAAAACAGAAAATAAAGCAGA TGCTGACACACCAGCTGGGGAGACCAAAGAAGGTGAAATTACAGTAGAGGAAACAGATGA GAAAATAGAATCTAAAGTTACTGCTGAACCTGTAATCGGGGAGACAACTGAAGGTCAAAC TGCAGCTGGAGAACCAGTTGAAGAAGCTAGAACAGCTGAGGACATGGTAGAAGATGTTAA GGTGCTAGATGATAAATCTACAGCAGCTGAGAAACCTGTAGAGAATGCCACAGTTGTGGC ACATGAGAATTCGACTACAGTTGAGAATACTCTGAAGGATGCGATTGTCGCGCCACCAGA TGCAAATACCACCAACGCCGAAAAAACTGCTATTGGTGCCACAATTGAAACACAAAATGA GGACGCTCCAGCGGAGAGGACTATAGAGGATACCTCGGTTGAGGCACCAGATGTACAAGC AGGTGCAAGTGAGTAAACCAGCTTAGCGATCCTTTGCATTCCTGTCAGTTTCTGTTGATA TCGACGTAGTTTGCTCAACTGATTCTCTTGTCTAGATGATGTGTTCTGTATAGAAAACCT GGAACCACTTTAGCATCATAAGGCTGTTAGGTTTTAAATAACTTGGGCATCTATATTTTG CCCCTTATTTTTCCTATATAAACTTCATCTAGTTGTATTCGATGCGCACGTGTGAGTTTG TCATAAACACAATTTTCTCCTATATGTCAGTTCAGTGCTCAGGCGATCAGTGACTGAGTG GAAGTCTTTGGGCTATCTACTTGGATCAAATGATTCTGGTACCATTTGTCGTCTGTAACC AACTGTGTTCTCGAATCCTTCTACCATATTACCTAGTCCTCTATCTCATTGATCTTCGAA GCTTAGTAACCATTTAGCAATTTATTTCGCGGTGTATGCGTGTT