Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010546_T025
CDS Infomation	cds chromosome:B73_RefGen_v4:8:120069991:120087721:-1 gene:Zm00001d010546 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative SAC3/GANP family protein
Sequence	ATGGCGAGCCACGGCATCGGGGCGGCCGCTGGATCTGACGCCCCGCACGCTGAGGTCGTC ACTATGGGACAGACAAATCCATCTCCTTATCCTCCTGTATCTTCCAGTCATCATTCATGG TCCTCTGCAACTGGGTCAGTTTCATGGAACAATACAGTGGACAAACTTAGCCAAGATACA GTTTATTATGATCCACAAAGGGATGTATCGGTTTCAGGAGGGAATCAAAATGTAGGAAGC AGTGCGCCTCATGTTGCCCAGGCGAGTATGGGGATAACAGACGCAGCTCATTCCCATGTA CCTTACTCTAGTTCAGATCAACATGGCTATAACCCTGTAGAATATGCCAATTATTATTAT AGCTACCCACAAGCGGCAAATGATTCTTCTGTCCAGCAAGGAGCAAACCAACATCCAGGT GCAGCTTATCAGCCTCTTACTTCATTTCAAAATTCAGGGTCTTACATTGATCCTACAAGT AACACATATTACAATGCTGGGGATCATCAGACTGTGCCAGGATATGGAAGCAGCAGCTAC TATTTTCAGAACAACACATGGAATGGTGGAAGCACAGGGAATAATTTTGCTCAATCATAC CAGAACTACTCACCATCTGATACAAATGCACAACAGAGCTCTACTTCAGTGCCTGCCAAT TCTTTACCGTATCAGCAGCAGTATAACCAGTGGCCGTACTATTACAATCAATCTGTGCCA AGTGCTTCTAGCAATCCAGTTGCTGGGAACAGTACTACAGATAACTTAGCTGTTAACACC CCTTCTAGCTACTCCTATCCTAATAGCCAGCCACCTCCACCAGGAACAACATCATGGAAA AGTAATTCAAGTGCTTCTGTTGCGCCTCCTATGCAGGTACCAGGTGTTTTGGAACATCAA AATCAATATGGCAACCAGGCGGAAGGTCATTATAACCAGGGACCAGGTGTCCAATGGTCT CAAAACCATTACGCCTACCAGACACAGCCATACCCTCAGAAGATTAATTCCAATTATTCG CAACTAAGCAACCCTGAAGATCAACTGAGGACTGTAGATTCTAACGGTCCAAGCACAAAT CTTTCGTCTAACCATGTTTCTGAAAATTTTAAACCAAACTTGCTGGATTCTGTGACAATG AACACTTCCAGCGAAAGCAAAATACAAGTTCCTATAAATCCTCGAATTGCCCAAGGTTTC TCTATGGTGATACCAAAGAATGAGAAGAAAAGTTCTGGACTTGATTTATCAAGGAAACCT GCCTATGTTAGTGTGTCCATGCCGGCGAACGATGCTAAAGCAAGTCAAGTTGGTCCTGAT GCTAGATCGATACCCTTTTCACTCCGTAACTATGCTATGAGGAACCTCAATCGTTGCAAG AATGATACCCAGAGGGCAGCCTGCCGAAGCATAATGGAGGAGATCACAAAAAAAGCTTTT GCTGAGGGAACCCTTCTTACTAAGAACTGGGACACTGAACCACTATTTCCTTTGCCTGAA AGTGTTGTGGGCATGGCTGGAGCAAGTGATTTAAGTCCCTTCTTGTCAGTATCTACCCCA AGGAAACGTGTGAAAAGTAGATGGGAGCCTGTTGTGGATGAAAATGTTACCAATAAGGTG GAACAAATAGCAAAAGGATTGATCAGCAGTAATGTCCACAGTACTTTGGACCCTAAAAAT AGAATTGGTAGCAGTTGGGATCGTGGGAAGTTTCTCCAGTCTTGTCAAGCATCATCAAAT AAAGTCAATCAGAGGCCTGCCAAGAAGCAAAAAATGGCTAGTAATTTGAGTCAAATACAG AATGGAAGTGCTTCAAGTGACAGTGAGAAGGAACATGATCTAACCAAACATTATGCCAGT GCAACTGCACTAGCAAACTCGCCTGAGGAAAAGAAACGTAGGGAGCATAGATCCAAGCGT TTTGAAAAGAGTAAAGATTCATCATTAAAATCAAGAAATGCTTCTGCAAATAACGATGGT ATGGCTAGTTTTCGTGCAAGAAGGGCAATTTCGTCTCTTCGTACTAGAACCTATGAAGAA GGCACTTTGGCTGTGGAGGATATGGATTGGGATGCACTGACAGTCAAAGGAACATGTCAG GAAATTGAGAAACGCTATCTACGACTTACAGAAGCACCTGATCCTGCCAAAGTAAGGCCA GAAGATGTTCTGGAGAAGGCCCTTGCAATGGTTGAAACATCAGAAAAGAATTACCTTTAC AAGTGTGATCAACTAAAATCTATCCGGCAAGATCTTACAGTTCAGAGAATCCAGAATGAA CTGACTGTAAAGGTTTATGAAACCCATGCCCGATTAGCTATGCAAGCTGGCGATTTACCC GAATTTAACCAGTGCCAGTCACAACTGAAGAGGCTATATGCACAAGGAATCAAGGGTTGC TATTTTGAATTTTCTGCTTACAATTTGTTGTGTGTCATGCTACACTCTAATAATAAACGA GACTTGCTGTCATCAATGGCAAGCTTGTCAAAAGAAGCCAAACAAGATGCAGCTGTTAAG CATTCCCTTGCAGTTCATGCTTCTGTTTTATCTTGCAATTACGTTCAATTTTTCAAACTA TACAAGAAGGCACCCAATTTGAACTCATGCCTCATGGATCTATATGTGGAGCGGATGCGC TTTGAAGCTATGAAATGCATGTCTAGGTCATATCGCCCAACTGTACCTGTGGGATATGTT GCACAGATTTTGGGGTTCTTGAGAACAGATACAGGCTGTGCAACCAATGGGGATGATGGA TTAGAAGGATGCGAAAAATGGTTGAAAGCGCATGGGACAGTTCTTTCAGAAGATAGCAGT GGGGAATTGCAGATAGATACGAAGGCCTCTTCTTCTACACTCTACATGCCAGAGCCAGAG AACGCCGTTGCACATGGTGATGCATCACTTGCTGTTGATGACTTTTTTGCACGGACTGAC GGACAACTTAAAAGGGGCAGCAGCGATGGACCAACAGTGGATACTCCGTAG

Peptide Sequence

PEP ID	Zm00001d010546_P025
PEP Infomation	pep chromosome:B73_RefGen_v4:8:120069991:120087721:-1 gene:Zm00001d010546 transcript:Zm00001d010546_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative SAC3/GANP family protein
Sequence	MASHGIGAAAGSDAPHAEVVTMGQTNPSPYPPVSSSHHSWSSATGSVSWNNTVDKLSQDT VYYDPQRDVSVSGGNQNVGSSAPHVAQASMGITDAAHSHVPYSSSDQHGYNPVEYANYYY SYPQAANDSSVQQGANQHPGAAYQPLTSFQNSGSYIDPTSNTYYNAGDHQTVPGYGSSSY YFQNNTWNGGSTGNNFAQSYQNYSPSDTNAQQSSTSVPANSLPYQQQYNQWPYYYNQSVP SASSNPVAGNSTTDNLAVNTPSSYSYPNSQPPPPGTTSWKSNSSASVAPPMQVPGVLEHQ NQYGNQAEGHYNQGPGVQWSQNHYAYQTQPYPQKINSNYSQLSNPEDQLRTVDSNGPSTN LSSNHVSENFKPNLLDSVTMNTSSESKIQVPINPRIAQGFSMVIPKNEKKSSGLDLSRKP AYVSVSMPANDAKASQVGPDARSIPFSLRNYAMRNLNRCKNDTQRAACRSIMEEITKKAF AEGTLLTKNWDTEPLFPLPESVVGMAGASDLSPFLSVSTPRKRVKSRWEPVVDENVTNKV EQIAKGLISSNVHSTLDPKNRIGSSWDRGKFLQSCQASSNKVNQRPAKKQKMASNLSQIQ NGSASSDSEKEHDLTKHYASATALANSPEEKKRREHRSKRFEKSKDSSLKSRNASANNDG MASFRARRAISSLRTRTYEEGTLAVEDMDWDALTVKGTCQEIEKRYLRLTEAPDPAKVRP EDVLEKALAMVETSEKNYLYKCDQLKSIRQDLTVQRIQNELTVKVYETHARLAMQAGDLP EFNQCQSQLKRLYAQGIKGCYFEFSAYNLLCVMLHSNNKRDLLSSMASLSKEAKQDAAVK HSLAVHASVLSCNYVQFFKLYKKAPNLNSCLMDLYVERMRFEAMKCMSRSYRPTVPVGYV AQILGFLRTDTGCATNGDDGLEGCEKWLKAHGTVLSEDSSGELQIDTKASSSTLYMPEPE NAVAHGDASLAVDDFFARTDGQLKRGSSDGPTVDTP

Transcript Sequence

Transcript ID	Zm00001d010546_T025
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:120069991:120087721:-1 gene:Zm00001d010546 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative SAC3/GANP family protein
Sequence	ACCTCCTCAGCCCGTTTCCCCTAACGCTCACACTCTACGCCGCCGCGTCGTCGGCCTCGC CCTCCCTCTCGACGAACTAAGCCATCCCCGGCCGAGCTTCCGACGCATTCCCGGGCCACT TCCCTCCCTTCCGGCCTTCCTACTCCCTCCACGCACCGCAACTGTGACACTCCGCTCCGA CGCGGGCGCCGCAGGCCGTTGACGACACCCGAACCCAACCGGCAACGCGCCCGAAAGGGG CAGGGACTCCTTTTGCTTGTCCTTCGCCCCTCTTCTCGCTTTCTGCGGAGGGAAAAACTT TCCCAGTCAATTAAAAAAAAAATCGACGGACGGCTTTACGCACGCGATTCGCTGCTCGCC CCCAAATTTCTCCTCTGCTTCTGGTTCCTTTGACGCATCTGATCATTTCCCCCTCCTCTA CGCGGGTCGAATCGCGAGAGTGTGGCGGCGGCTGTGGTGGTTGACTGGTGCTTAGGGTTG GAGCTCCAGGAGGATGGCGAGCCACGGCATCGGGGCGGCCGCTGGATCTGACGCCCCGCA CGCTGAGGTCGTCACTATGGGACAGACAAATCCATCTCCTTATCCTCCTGTATCTTCCAG TCATCATTCATGGTCCTCTGCAACTGGGTCAGTTTCATGGAACAATACAGTGGACAAACT TAGCCAAGATACAGTTTATTATGATCCACAAAGGGATGTATCGGTTTCAGGAGGGAATCA AAATGTAGGAAGCAGTGCGCCTCATGTTGCCCAGGCGAGTATGGGGATAACAGACGCAGC TCATTCCCATGTACCTTACTCTAGTTCAGATCAACATGGCTATAACCCTGTAGAATATGC CAATTATTATTATAGCTACCCACAAGCGGCAAATGATTCTTCTGTCCAGCAAGGAGCAAA CCAACATCCAGGTGCAGCTTATCAGCCTCTTACTTCATTTCAAAATTCAGGGTCTTACAT TGATCCTACAAGTAACACATATTACAATGCTGGGGATCATCAGACTGTGCCAGGATATGG AAGCAGCAGCTACTATTTTCAGAACAACACATGGAATGGTGGAAGCACAGGGAATAATTT TGCTCAATCATACCAGAACTACTCACCATCTGATACAAATGCACAACAGAGCTCTACTTC AGTGCCTGCCAATTCTTTACCGTATCAGCAGCAGTATAACCAGTGGCCGTACTATTACAA TCAATCTGTGCCAAGTGCTTCTAGCAATCCAGTTGCTGGGAACAGTACTACAGATAACTT AGCTGTTAACACCCCTTCTAGCTACTCCTATCCTAATAGCCAGCCACCTCCACCAGGAAC AACATCATGGAAAAGTAATTCAAGTGCTTCTGTTGCGCCTCCTATGCAGGTACCAGGTGT TTTGGAACATCAAAATCAATATGGCAACCAGGCGGAAGGTCATTATAACCAGGGACCAGG TGTCCAATGGTCTCAAAACCATTACGCCTACCAGACACAGCCATACCCTCAGAAGATTAA TTCCAATTATTCGCAACTAAGCAACCCTGAAGATCAACTGAGGACTGTAGATTCTAACGG TCCAAGCACAAATCTTTCGTCTAACCATGTTTCTGAAAATTTTAAACCAAACTTGCTGGA TTCTGTGACAATGAACACTTCCAGCGAAAGCAAAATACAAGTTCCTATAAATCCTCGAAT TGCCCAAGGTTTCTCTATGGTGATACCAAAGAATGAGAAGAAAAGTTCTGGACTTGATTT ATCAAGGAAACCTGCCTATGTTAGTGTGTCCATGCCGGCGAACGATGCTAAAGCAAGTCA AGTTGGTCCTGATGCTAGATCGATACCCTTTTCACTCCGTAACTATGCTATGAGGAACCT CAATCGTTGCAAGAATGATACCCAGAGGGCAGCCTGCCGAAGCATAATGGAGGAGATCAC AAAAAAAGCTTTTGCTGAGGGAACCCTTCTTACTAAGAACTGGGACACTGAACCACTATT TCCTTTGCCTGAAAGTGTTGTGGGCATGGCTGGAGCAAGTGATTTAAGTCCCTTCTTGTC AGTATCTACCCCAAGGAAACGTGTGAAAAGTAGATGGGAGCCTGTTGTGGATGAAAATGT TACCAATAAGGTGGAACAAATAGCAAAAGGATTGATCAGCAGTAATGTCCACAGTACTTT GGACCCTAAAAATAGAATTGGTAGCAGTTGGGATCGTGGGAAGTTTCTCCAGTCTTGTCA AGCATCATCAAATAAAGTCAATCAGAGGCCTGCCAAGAAGCAAAAAATGGCTAGTAATTT GAGTCAAATACAGAATGGAAGTGCTTCAAGTGACAGTGAGAAGGAACATGATCTAACCAA ACATTATGCCAGTGCAACTGCACTAGCAAACTCGCCTGAGGAAAAGAAACGTAGGGAGCA TAGATCCAAGCGTTTTGAAAAGAGTAAAGATTCATCATTAAAATCAAGAAATGCTTCTGC AAATAACGATGGTATGGCTAGTTTTCGTGCAAGAAGGGCAATTTCGTCTCTTCGTACTAG AACCTATGAAGAAGGCACTTTGGCTGTGGAGGATATGGATTGGGATGCACTGACAGTCAA AGGAACATGTCAGGAAATTGAGAAACGCTATCTACGACTTACAGAAGCACCTGATCCTGC CAAAGTAAGGCCAGAAGATGTTCTGGAGAAGGCCCTTGCAATGGTTGAAACATCAGAAAA GAATTACCTTTACAAGTGTGATCAACTAAAATCTATCCGGCAAGATCTTACAGTTCAGAG AATCCAGAATGAACTGACTGTAAAGGTTTATGAAACCCATGCCCGATTAGCTATGCAAGC TGGCGATTTACCCGAATTTAACCAGTGCCAGTCACAACTGAAGAGGCTATATGCACAAGG AATCAAGGGTTGCTATTTTGAATTTTCTGCTTACAATTTGTTGTGTGTCATGCTACACTC TAATAATAAACGAGACTTGCTGTCATCAATGGCAAGCTTGTCAAAAGAAGCCAAACAAGA TGCAGCTGTTAAGCATTCCCTTGCAGTTCATGCTTCTGTTTTATCTTGCAATTACGTTCA ATTTTTCAAACTATACAAGAAGGCACCCAATTTGAACTCATGCCTCATGGATCTATATGT GGAGCGGATGCGCTTTGAAGCTATGAAATGCATGTCTAGGTCATATCGCCCAACTGTACC TGTGGGATATGTTGCACAGATTTTGGGGTTCTTGAGAACAGATACAGGCTGTGCAACCAA TGGGGATGATGGATTAGAAGGATGCGAAAAATGGTTGAAAGCGCATGGGACAGTTCTTTC AGAAGATAGCAGTGGGGAATTGCAGATAGATACGAAGGCCTCTTCTTCTACACTCTACAT GCCAGAGCCAGAGAACGCCGTTGCACATGGTGATGCATCACTTGCTGTTGATGACTTTTT TGCACGGACTGACGGACAACTTAAAAGGGGCAGCAGCGATGGACCAACAGTGGATACTCC GTAGTAGTATTGGGGGCTGCCGTGGCAGTAGTGCTGAGGTGGCTTCTTCCGTAGAAATTA CAACAGGGGGCATGAAATGGAACTGACCAACGATGCCAGCGGAGCTACAGTCGGAACATG GGTGCTCTAACTGATCCAGTCATCGGGTTCTGGCATTTGCCTCAAAGTGATCTAGTCATC CAGAGTTGCACCGCGATGAGCTTCGTTGAGAAGGCAGATAAGAAAGCAGCATTAC