Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010536_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:119691974:119695828:-1 gene:Zm00001d010536 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein tyrosine phosphatase-like protein PTPLB

Sequence

ATGGTTCGCCTTGCGAAGTTCTATCTCGTCTGCTACAACTCCCTCCAATCGCTCGGATGG
TTCGTCTCCCTCCTCCGCCTCCTGCCCTGCCTCGTCCCTCCCTTCCCTGTCCACTCCGCG
TACGTGGTCGCCGGCGACCTCATCTGTTTCCTACAGACATGTGCGATCCTTGAAACGGTC
CACGCTGCCATCGGATTGGTGCCGACCGCGCCACTTCTTGCTTTCTTGCAATGGGGAGGG
AGGATCCACTTCATCCTGGCTGTTGTCCGGCAAATTCCCGAGGTTCAGAGCAGTCCATCT
GTGTTCATAACATTTATAGCTTGGAGCATATCTGAGGTCATCCGTTACTCTCACTATGCT
CTGACTACCTTAAAAGTTTGTCCAGCATGGCTGACTTATCTCAGGTACACTGCTTTTATC
CCGCTGTATCCAATCGGGGTTGGCCCAGGAGAAATGTGGACAATGTACCAAGCCCTCCCG
TTTGTGAAGAAGAGGGACCTTTACTCAGGTTTCTTCGAGAAGTTCTCCATGAGCTACCGT
TCCTTTCTAGTGGGTGTGCTGGTGCTCTACCCGTTCCTGTGGCTGAAGCTGTACCAGCAC
GTGTTCAAGCAGCGCAAGTCCAAGCTGGGGAAGGGGAGCAGGAAGAAACGGGCCTGA

Peptide Sequence

PEP ID

Zm00001d010536_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:119691974:119695828:-1 gene:Zm00001d010536 transcript:Zm00001d010536_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein tyrosine phosphatase-like protein PTPLB

Sequence

MVRLAKFYLVCYNSLQSLGWFVSLLRLLPCLVPPFPVHSAYVVAGDLICFLQTCAILETV
HAAIGLVPTAPLLAFLQWGGRIHFILAVVRQIPEVQSSPSVFITFIAWSISEVIRYSHYA
LTTLKVCPAWLTYLRYTAFIPLYPIGVGPGEMWTMYQALPFVKKRDLYSGFFEKFSMSYR
SFLVGVLVLYPFLWLKLYQHVFKQRKSKLGKGSRKKRA

Transcript Sequence

Transcript ID

Zm00001d010536_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:119691974:119695828:-1 gene:Zm00001d010536 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein tyrosine phosphatase-like protein PTPLB

Sequence

GTCGAAACCACAGCCACACAGGCAGCCGGTGCTGGGCCTCGGCACTCGGCAGCCATGGTT
CGCCTTGCGAAGTTCTATCTCGTCTGCTACAACTCCCTCCAATCGCTCGGATGGTTCGTC
TCCCTCCTCCGCCTCCTGCCCTGCCTCGTCCCTCCCTTCCCTGTCCACTCCGCGTACGTG
GTCGCCGGCGACCTCATCTGTTTCCTACAGACATGTGCGATCCTTGAAACGGTCCACGCT
GCCATCGGATTGGTGCCGACCGCGCCACTTCTTGCTTTCTTGCAATGGGGAGGGAGGATC
CACTTCATCCTGGCTGTTGTCCGGCAAATTCCCGAGGTTCAGAGCAGTCCATCTGTGTTC
ATAACATTTATAGCTTGGAGCATATCTGAGGTCATCCGTTACTCTCACTATGCTCTGACT
ACCTTAAAAGTTTGTCCAGCATGGCTGACTTATCTCAGGTACACTGCTTTTATCCCGCTG
TATCCAATCGGGGTTGGCCCAGGAGAAATGTGGACAATGTACCAAGCCCTCCCGTTTGTG
AAGAAGAGGGACCTTTACTCAGGTTTCTTCGAGAAGTTCTCCATGAGCTACCGTTCCTTT
CTAGTGGGTGTGCTGGTGCTCTACCCGTTCCTGTGGCTGAAGCTGTACCAGCACGTGTTC
AAGCAGCGCAAGTCCAAGCTGGGGAAGGGGAGCAGGAAGAAACGGGCCTGAGAAAATCTG
GCTCTGCTCAGCTCAGCTGCCACTTGTTGCTGTCATGTGAAACGCTAACGGGTCATTGTG
GATTTTTGTTTTGGAAGAAAATCTTTGTGAGTTGTTGTCTGATGCGACGGGGGCAGTTAT
TGGATTACGCTTTGGGTTCTCTGTTTGTTTCAATTGCTCTGCGTTTTATGTCTGTATTAA
CATACATCAAGCATATATAATAGTCATGTTGCTGCTGCGAGTCTAATCAA