Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010499_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:118126464:118128699:1 gene:Zm00001d010499 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec14p-like phosphatidylinositol transfer family protein
Sequence

ATGAGCTACCCACGCAGCAGCAAGAGCGACCCAACGACGAAGAAACAGGCAGCGGCGGCG
GCGGTGGCGTCAGAAGAACAGCAGGCAAAGATGATAAATGAGGTGCGGGAACTCCTGCGG
CCGGCGGAGATGCCGGGCTTCTTGACGGACTCCACCGTCCGCCGCTTCCTCCACGCTAGG
AGCTGGAGCGCAGCGCAAGCCACCAAGGCTGTCAAGGAAACCGTCAAGTGGAGGCGCCAG
TACAGGCCGGACGAAATCCGTTGGGATGACATTCCTGGAAGGGAGCATGAGGTGAAGAGA
GCGTACATAGCTGACTACCTCGACAAGGATGGCCGGACTGTGGTGGTAACAGTGCCGGCG
ATAAAGGTTATTATAATTAAACTGCTTGCTACCGGCTGCACCCGCAGCATGGCGAGCCAA
ATTTCAGCGAAGGAGCAGGTGAAACTACTAGTTTACACCTTGGAGAGCTGTACCGCGGGC
TCAGAAAACGGGCAAGAAAGTGTTGTTTGGATAGCTGACTTCCGTGGATGGACACTGTCA
AGTACTCCGTTGGCACAGTCACGTCAATCGATGAACATCATTCAGAAACATTACCCAGGG
CTGATAGCAGCCGCGATCCTTTTCGACCCTCCAAAGATCTTTGAATCCTTTTGGAAGATG
CTAAGTTACTTCATCGAGCCGGAGCTGGAAAAGAAGGTGAAATTCGTGTACACTGACAAT
CCTGAGAGCCAGAGGATAATGGCCGACATGTTTGACATGGAGAAGCTGGACTCCGCATTT
GGTGGCCGCAGCGCGTCTGGCATCGACGTTGCCAAGTATTCCGAGAGAATGCGAACAGGA
GATCAGATTAGGGGTCTTCGCTAA

Peptide Sequence

PEP ID

Zm00001d010499_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:118126464:118128699:1 gene:Zm00001d010499 transcript:Zm00001d010499_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec14p-like phosphatidylinositol transfer family protein
Sequence

MSYPRSSKSDPTTKKQAAAAAVASEEQQAKMINEVRELLRPAEMPGFLTDSTVRRFLHAR
SWSAAQATKAVKETVKWRRQYRPDEIRWDDIPGREHEVKRAYIADYLDKDGRTVVVTVPA
IKVIIIKLLATGCTRSMASQISAKEQVKLLVYTLESCTAGSENGQESVVWIADFRGWTLS
STPLAQSRQSMNIIQKHYPGLIAAAILFDPPKIFESFWKMLSYFIEPELEKKVKFVYTDN
PESQRIMADMFDMEKLDSAFGGRSASGIDVAKYSERMRTGDQIRGLR

Transcript Sequence

Transcript ID

Zm00001d010499_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:118126464:118128699:1 gene:Zm00001d010499 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec14p-like phosphatidylinositol transfer family protein
Sequence

ATCGAATCAGCACGCGAGAAGCTCTATATATAAAACCGATCGAGGAGGAGCTAGCAGCTC
GAGTGCAGGTCCGCAGCAGGTGTCCAGAACCCCAGAACCCAGCGAGCACACAAGAATTCA
AGCAGCAGCGCGATGAGCTACCCACGCAGCAGCAAGAGCGACCCAACGACGAAGAAACAG
GCAGCGGCGGCGGCGGTGGCGTCAGAAGAACAGCAGGCAAAGATGATAAATGAGGTGCGG
GAACTCCTGCGGCCGGCGGAGATGCCGGGCTTCTTGACGGACTCCACCGTCCGCCGCTTC
CTCCACGCTAGGAGCTGGAGCGCAGCGCAAGCCACCAAGGCTGTCAAGGAAACCGTCAAG
TGGAGGCGCCAGTACAGGCCGGACGAAATCCGTTGGGATGACATTCCTGGAAGGGAGCAT
GAGGTGAAGAGAGCGTACATAGCTGACTACCTCGACAAGGATGGCCGGACTGTGGTGGTA
ACAGTGCCGGCGATAAAGGTTATTATAATTAAACTGCTTGCTACCGGCTGCACCCGCAGC
ATGGCGAGCCAAATTTCAGCGAAGGAGCAGGTGAAACTACTAGTTTACACCTTGGAGAGC
TGTACCGCGGGCTCAGAAAACGGGCAAGAAAGTGTTGTTTGGATAGCTGACTTCCGTGGA
TGGACACTGTCAAGTACTCCGTTGGCACAGTCACGTCAATCGATGAACATCATTCAGAAA
CATTACCCAGGGCTGATAGCAGCCGCGATCCTTTTCGACCCTCCAAAGATCTTTGAATCC
TTTTGGAAGATGCTAAGTTACTTCATCGAGCCGGAGCTGGAAAAGAAGGTGAAATTCGTG
TACACTGACAATCCTGAGAGCCAGAGGATAATGGCCGACATGTTTGACATGGAGAAGCTG
GACTCCGCATTTGGTGGCCGCAGCGCGTCTGGCATCGACGTTGCCAAGTATTCCGAGAGA
ATGCGAACAGGAGATCAGATTAGGGGTCTTCGCTAACGGCAAATGGAATACTGCTATCTC
ACAGTTCGTCAAGAAACTGTTCAGATAACAAGATAATTAAAATGGATCACTACGGAATTC
TAGTGGTTACATCACAACAGACCAGGATGAATTATGATGTCTGCTAGATATATTATTAGC
TCTGAATGATTGGGATACCAGGTTTTTGATGATCCGTGTAATGAGATGACATGACAATAT
ATACATGGGCCGTCCACACTGTGAGC