Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010447_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:115541975:115546228:1 gene:Zm00001d010447 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

ATGGCAGCCGCCGCCTTCGGCTCCGCCACTGGTGGCGGGTCGCGGCTTGTGGACCGCTGC
ATCGACGCGGCAGCGCGCGGTCCCGCCACTGTGGAGGCCTGGCGCCGGCAGCGCCGCTCC
CTGGAGCGCCTCCCGGCCCCGCTCGCCGACGCGCTCTTACGCCGCCTAGCTGCGCGTCGC
CTTCTCTTCCCCTCCCTCCTCGAGGTGTTTGGCCGGTCAGTAGAGGAGGTTGATCTGAGT
GGATTTCTTTCTGTGAATTCCGAGTGGTTGGCATACCTTGGCTCCTTCAGGTACCTTAGG
GTTCTGAAGTTGGCGGACTGCAAGAACATCAACAATGACGCTGTCTGGTCGCTCTCTGGA
ATGAACACATTAAAGGAGCTGGACTTGTCAAGGTGCAAAAAGATTTCTGATGCTGGCATC
AAACATATAGTGACCATTGAAAGCTTAGAGAAGCTACACTTATCTGAGACTGAATTGACT
GACAATGGAGTGATGCTCATTTCTTCACTGACAAATCTAAGTTTCCTTGATCTAGGTGGA
ATTCTCATGACAGACAAAACCCTACAGTCTTTACAGGTATTGACAAAACTTGAGCATCTT
GATATATGGGGTAGTGAAACTACAAATGAGGGAGCTTCTGCTCTGAAATCCTTTGCAAGG
CTGCTATCCTTGAATCTTGCGTTGACACGTGTCAACCATTTATCAATTCCTCCAACCACA
AGCTATCTAAATATGAGCAACTGCGAAATTCATTCTATTTGTGATGTGGATTCTGAAGTT
CCTGTTCCACTAGAAAACTTTATTGTCTCTGCAGCTACATTTGGCAATATTGATAAAGTA
TTTTCTAGCATCCAAGCAAGCTCACTGATACATTTGGACTTGTCTAGCTGCAAGTTAAGC
AACTTGTCTTTCTTGGAAAAGATGAAGAATCTAGAGCATCTGGACCTTAGCTACAACATA
ATAACTGATGGTGCAATTGAACATATTGCGAAGATTGGAACAAACTTGCAATATTTGAGC
CTCAAGAATACTGGAATAACTTCCCAGGCACTATGTATTCTGGCAGGGACAGTTCCAAAC
CTCACCTCACTGTCTTTAGCTAATACAAAAATTGATGACTCTGCTCTAGCATATATTGGC
ATGATACCTTTGCTGAGAACGATAGATTTAAGCCAGACAAGTATCAAAGGCGATGCTATT
TCAACATTCCGTAAGCGTCATCCTACGATTGAATTGAGACATGAGCTCCTGCACGAAGTT
GAGGAAAATTTTGTTGGTGGTTCCCAATTTCGTAAACCTAGACGCAGACGATCTCCTCAT
GTGAAAGCAGAAGTTGGAAACAGTTTTGCTGGCTCAAGTAGGCTACACGATATCCGTTTT
GTAGATGAAAGGATAAAATACAGCAAGGAGGAATTTGTGGAGCTGCAAGGCCTTGCTAAA
CCAAATTCGTTAATGCTTGGCGTGTGGCTTCCACCAGAACTGCGAAGGCCCAAATGA

Peptide Sequence

PEP ID

Zm00001d010447_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:115541975:115546228:1 gene:Zm00001d010447 transcript:Zm00001d010447_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

MAAAAFGSATGGGSRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARR
LLFPSLLEVFGRSVEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSG
MNTLKELDLSRCKKISDAGIKHIVTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGG
ILMTDKTLQSLQVLTKLEHLDIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTT
SYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLS
NLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPN
LTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKGDAISTFRKRHPTIELRHELLHEV
EENFVGGSQFRKPRRRRSPHVKAEVGNSFAGSSRLHDIRFVDERIKYSKEEFVELQGLAK
PNSLMLGVWLPPELRRPK

Transcript Sequence

Transcript ID

Zm00001d010447_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:115541975:115546228:1 gene:Zm00001d010447 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

GACGAGTTTGCGATTTTGGATCCCATCCCATCGTTTCCTCCTCCTCCCTCTGGCCTCCGG
TCACGGCTCGATCTCCCGTTCCAATCACGCCCATGGCAGCCGCCGCCTTCGGCTCCGCCA
CTGGTGGCGGGTCGCGGCTTGTGGACCGCTGCATCGACGCGGCAGCGCGCGGTCCCGCCA
CTGTGGAGGCCTGGCGCCGGCAGCGCCGCTCCCTGGAGCGCCTCCCGGCCCCGCTCGCCG
ACGCGCTCTTACGCCGCCTAGCTGCGCGTCGCCTTCTCTTCCCCTCCCTCCTCGAGGTGT
TTGGCCGGTCAGTAGAGGAGGTTGATCTGAGTGGATTTCTTTCTGTGAATTCCGAGTGGT
TGGCATACCTTGGCTCCTTCAGGTACCTTAGGGTTCTGAAGTTGGCGGACTGCAAGAACA
TCAACAATGACGCTGTCTGGTCGCTCTCTGGAATGAACACATTAAAGGAGCTGGACTTGT
CAAGGTGCAAAAAGATTTCTGATGCTGGCATCAAACATATAGTGACCATTGAAAGCTTAG
AGAAGCTACACTTATCTGAGACTGAATTGACTGACAATGGAGTGATGCTCATTTCTTCAC
TGACAAATCTAAGTTTCCTTGATCTAGGTGGAATTCTCATGACAGACAAAACCCTACAGT
CTTTACAGGTATTGACAAAACTTGAGCATCTTGATATATGGGGTAGTGAAACTACAAATG
AGGGAGCTTCTGCTCTGAAATCCTTTGCAAGGCTGCTATCCTTGAATCTTGCGTTGACAC
GTGTCAACCATTTATCAATTCCTCCAACCACAAGCTATCTAAATATGAGCAACTGCGAAA
TTCATTCTATTTGTGATGTGGATTCTGAAGTTCCTGTTCCACTAGAAAACTTTATTGTCT
CTGCAGCTACATTTGGCAATATTGATAAAGTATTTTCTAGCATCCAAGCAAGCTCACTGA
TACATTTGGACTTGTCTAGCTGCAAGTTAAGCAACTTGTCTTTCTTGGAAAAGATGAAGA
ATCTAGAGCATCTGGACCTTAGCTACAACATAATAACTGATGGTGCAATTGAACATATTG
CGAAGATTGGAACAAACTTGCAATATTTGAGCCTCAAGAATACTGGAATAACTTCCCAGG
CACTATGTATTCTGGCAGGGACAGTTCCAAACCTCACCTCACTGTCTTTAGCTAATACAA
AAATTGATGACTCTGCTCTAGCATATATTGGCATGATACCTTTGCTGAGAACGATAGATT
TAAGCCAGACAAGTATCAAAGGCGATGCTATTTCAACATTCCGTAAGCGTCATCCTACGA
TTGAATTGAGACATGAGCTCCTGCACGAAGTTGAGGAAAATTTTGTTGGTGGTTCCCAAT
TTCGTAAACCTAGACGCAGACGATCTCCTCATGTGAAAGCAGAAGTTGGAAACAGTTTTG
CTGGCTCAAGTAGGCTACACGATATCCGTTTTGTAGATGAAAGGATAAAATACAGCAAGG
AGGAATTTGTGGAGCTGCAAGGCCTTGCTAAACCAAATTCGTTAATGCTTGGCGTGTGGC
TTCCACCAGAACTGCGAAGGCCCAAATGATAGTTTTGGATCTTGATTCCTTACGCATTTA
CTGCCAGCATATCATAATCTTCCTTGAGTTATTCTTGATATGACAGACTTTTGAGAATTA
AGCATCAAGCATGTCACTCAGTTCCAAATTATAGTTCACTTTGGTTTTGTCCTAGGTCAA
ACTTTTCTAGCTTTGACCTATGCATTCGAATAAATGCTATACCAAAATGTATTTCGTGAA
GAATCTAAAGAAACTGATTTGATGTTCTAGATGGTGGTACACTTTCCTTTAAACTTGGTC
AAACATAAAGAAGTTTGACTTATGAAACCAAAGTTAACTATAATTTGGAACAAAGGGAGT
ACACTGGAGTTATCTAAAACAAATTTTCGATAAATTAGTTTTAACATTTGCATTGGGCTC
TCATCAGTTGATCCTGAATCCAGTTCTCCGATCTGTGATATAAAATATCATTTTCTGGAG