Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010446_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:115490413:115493023:-1 gene:Zm00001d010446 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 6
Sequence

ATGGCCATGAACGTGATTGCACTACTTGGCCTCTTGGCACTTGCATCAGTGGTGAGGACG
GCTTCCGGCGCTGGCGGGCATGACTACGCCTCGGCATTGAAGAAGACCATCCTCTACTTC
GAGGCGCAGCGGTCCGGCGTGCTCCCGCCCAACCAGAGGATCACCTGGAGAGAGAACTCC
GGCCTCTTCGATGGAAAGGCCAACGGAGTGGACCTCGTCGGAGGGTACTACGACGCAGGC
GACAACGTGAAGTTCGGCCTGCCCATGGCGTTCACGGTGACCATGATGTCGTGGGGCATC
CTGGAGTACGGCAGGCAGATGGCGGCGGTCGGCGAGCTGCGCAACGCCATGGACGCCGTC
AAGTGGGGCACCGACTACTTCATCAAGGCGCACCCGGAGCCCGAGGTGCTGTACGGCGAG
GTGGGCGACGGCGACACGGACCACGGCTGCTGGCAGCGGCCCGAGGACATGTCCACGAGC
CGCCAGGCGTTCCGCATTGACCCCCAGAACCCCGGGTCCGACCTTGCCGGAGAGACCGCC
GCGGCCATGGCCGCCGCGTCCCTCGTGTTCCGCAGCACGTATCCGGGCTACGCCAACCTG
CTCCTTCAGCATGCCAAGGAGCTGTTCCAGTTCGCCGACAAGTACCGCGGCAAGTACGAC
GCCAGCATCACTGTCGCTCGCAACTACTACGGATCCTTCAGTGGATACGGGGACGAGCTT
CTGTGGGCGGCGGCATGGCTGTACGAGGCGACAGAGGAAGGGTGCTACCTCGAGTACATG
GCCCGGAATGGCGACGCTCTCGGCGGCACGGGCTGGTTCATCAACCAGTTCGGCTGGGAC
GTCAAGTACCCCGGCGTGCAGGTCCTGGCAGCCAAGTTCCTCCTGCAGGGCCGTGCCGGC
GCGCACGCCGCGACGCTGCAGCGGTACCGGCAGAACGCCGAGTTCTTCGTGTGCTCGTGC
GTGGGCAAGGGCGCCGTGAACGTGCCGCGGACCCCGGGCGGCATGATGTACCACCAGCGC
TGGAACAACCTCCAGTTCGTGACCAGCGCCTCGTTCCTGCTGACGGTGTACGCGGACTAC
GCCACGGCGCTGCCCGGCTCCGGCGGCGGCGCCTTGCGGTGCCCCGCGGGCGCCGCGCGG
CCTTTCGAGATCCTCGCCTTCGTCAGGTCCCAGGTGAACTACATCCTGGGCGACAACCCG
CGGGGCACCAGCTACATGGTCGGCTACGGCGCCAGCTTCCCGCGGCAGGTGCACCACCGC
GGCGCCTCCATCGTGTCGGTCAGGACGGACCCGTCCTTCGTCAGCTGCCAGGAGGGGTAC
TCCGCCTGGTACCCGCGGCAGGCCGGCAACCCCAACGTCCTGGAGGGCGCCATCGTCGGC
GGGCCCGACGAGTACGACGACTTCGCCGACGAGCGGAACAACTACGAGCAGACGGAGGCC
GCCACCTACAACAGCGCGCCGCTGCTCGGCGTCCTCGCCCGCCTCGCCGGCGCCTGCGGC
ACCGGGCTCGAGGAGTACCAGCTGCATCCGCCGGAGGAGGCCACCGCGAACCAGACGTCG
TCGTCGCGGTTGAGGCAGCCGTCGTCCCCGATCGAGATCGAGCAGAACGTGACGAGGACG
TGGGCGATGCGGCGCGCGACGTACTACCGCTACTCGGTGACGCTGACAAACAGGTCGAGG
AAGACCGTCCGGGAGCTCCACCTCGGCGTCTCGGAGCTCCGTGGCCGGCTCTGGGGCCTC
GACAAGGCGCGCTACGGGTACGTCCCGCCCAAGTGGCTACCGGCGTTGCGCGCAGGTAAG
AGCCTCAGGTTCGTGTACGTCCAGCACGGGACGCCGGCCAACGTCCGGGTCATCGGCTAC
AAGCTACTCTGA

Peptide Sequence

PEP ID

Zm00001d010446_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:115490413:115493023:-1 gene:Zm00001d010446 transcript:Zm00001d010446_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 6
Sequence

MAMNVIALLGLLALASVVRTASGAGGHDYASALKKTILYFEAQRSGVLPPNQRITWRENS
GLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWGILEYGRQMAAVGELRNAMDAV
KWGTDYFIKAHPEPEVLYGEVGDGDTDHGCWQRPEDMSTSRQAFRIDPQNPGSDLAGETA
AAMAAASLVFRSTYPGYANLLLQHAKELFQFADKYRGKYDASITVARNYYGSFSGYGDEL
LWAAAWLYEATEEGCYLEYMARNGDALGGTGWFINQFGWDVKYPGVQVLAAKFLLQGRAG
AHAATLQRYRQNAEFFVCSCVGKGAVNVPRTPGGMMYHQRWNNLQFVTSASFLLTVYADY
ATALPGSGGGALRCPAGAARPFEILAFVRSQVNYILGDNPRGTSYMVGYGASFPRQVHHR
GASIVSVRTDPSFVSCQEGYSAWYPRQAGNPNVLEGAIVGGPDEYDDFADERNNYEQTEA
ATYNSAPLLGVLARLAGACGTGLEEYQLHPPEEATANQTSSSRLRQPSSPIEIEQNVTRT
WAMRRATYYRYSVTLTNRSRKTVRELHLGVSELRGRLWGLDKARYGYVPPKWLPALRAGK
SLRFVYVQHGTPANVRVIGYKLL

Transcript Sequence

Transcript ID

Zm00001d010446_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:115490413:115493023:-1 gene:Zm00001d010446 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 6
Sequence

GCAGTACACAAGTAGTCAAGCCCAGCTTTGAACCTCTATCCATGTCCCCTGTACCCTCCA
AAACCAATTTATAAATACCTCTGCTTTGAGCTCCCTCCAAAACCAACCAGAGACCCCCTG
AGCAGTCACTACGGCTCGCATCACTCACTCACTGGTGCACTGCCATGGCCATGAACGTGA
TTGCACTACTTGGCCTCTTGGCACTTGCATCAGTGGTGAGGACGGCTTCCGGCGCTGGCG
GGCATGACTACGCCTCGGCATTGAAGAAGACCATCCTCTACTTCGAGGCGCAGCGGTCCG
GCGTGCTCCCGCCCAACCAGAGGATCACCTGGAGAGAGAACTCCGGCCTCTTCGATGGAA
AGGCCAACGGAGTGGACCTCGTCGGAGGGTACTACGACGCAGGCGACAACGTGAAGTTCG
GCCTGCCCATGGCGTTCACGGTGACCATGATGTCGTGGGGCATCCTGGAGTACGGCAGGC
AGATGGCGGCGGTCGGCGAGCTGCGCAACGCCATGGACGCCGTCAAGTGGGGCACCGACT
ACTTCATCAAGGCGCACCCGGAGCCCGAGGTGCTGTACGGCGAGGTGGGCGACGGCGACA
CGGACCACGGCTGCTGGCAGCGGCCCGAGGACATGTCCACGAGCCGCCAGGCGTTCCGCA
TTGACCCCCAGAACCCCGGGTCCGACCTTGCCGGAGAGACCGCCGCGGCCATGGCCGCCG
CGTCCCTCGTGTTCCGCAGCACGTATCCGGGCTACGCCAACCTGCTCCTTCAGCATGCCA
AGGAGCTGTTCCAGTTCGCCGACAAGTACCGCGGCAAGTACGACGCCAGCATCACTGTCG
CTCGCAACTACTACGGATCCTTCAGTGGATACGGGGACGAGCTTCTGTGGGCGGCGGCAT
GGCTGTACGAGGCGACAGAGGAAGGGTGCTACCTCGAGTACATGGCCCGGAATGGCGACG
CTCTCGGCGGCACGGGCTGGTTCATCAACCAGTTCGGCTGGGACGTCAAGTACCCCGGCG
TGCAGGTCCTGGCAGCCAAGTTCCTCCTGCAGGGCCGTGCCGGCGCGCACGCCGCGACGC
TGCAGCGGTACCGGCAGAACGCCGAGTTCTTCGTGTGCTCGTGCGTGGGCAAGGGCGCCG
TGAACGTGCCGCGGACCCCGGGCGGCATGATGTACCACCAGCGCTGGAACAACCTCCAGT
TCGTGACCAGCGCCTCGTTCCTGCTGACGGTGTACGCGGACTACGCCACGGCGCTGCCCG
GCTCCGGCGGCGGCGCCTTGCGGTGCCCCGCGGGCGCCGCGCGGCCTTTCGAGATCCTCG
CCTTCGTCAGGTCCCAGGTGAACTACATCCTGGGCGACAACCCGCGGGGCACCAGCTACA
TGGTCGGCTACGGCGCCAGCTTCCCGCGGCAGGTGCACCACCGCGGCGCCTCCATCGTGT
CGGTCAGGACGGACCCGTCCTTCGTCAGCTGCCAGGAGGGGTACTCCGCCTGGTACCCGC
GGCAGGCCGGCAACCCCAACGTCCTGGAGGGCGCCATCGTCGGCGGGCCCGACGAGTACG
ACGACTTCGCCGACGAGCGGAACAACTACGAGCAGACGGAGGCCGCCACCTACAACAGCG
CGCCGCTGCTCGGCGTCCTCGCCCGCCTCGCCGGCGCCTGCGGCACCGGGCTCGAGGAGT
ACCAGCTGCATCCGCCGGAGGAGGCCACCGCGAACCAGACGTCGTCGTCGCGGTTGAGGC
AGCCGTCGTCCCCGATCGAGATCGAGCAGAACGTGACGAGGACGTGGGCGATGCGGCGCG
CGACGTACTACCGCTACTCGGTGACGCTGACAAACAGGTCGAGGAAGACCGTCCGGGAGC
TCCACCTCGGCGTCTCGGAGCTCCGTGGCCGGCTCTGGGGCCTCGACAAGGCGCGCTACG
GGTACGTCCCGCCCAAGTGGCTACCGGCGTTGCGCGCAGGTAAGAGCCTCAGGTTCGTGT
ACGTCCAGCACGGGACGCCGGCCAACGTCCGGGTCATCGGCTACAAGCTACTCTGACGTC
ACGTCACCAAGTGACTGCGGCAGTGTGCTGCTACTGCTAGTAGCAAGCTAGTTTGGTGAG
TTCGTTTAGCTTTGCTCGTCCTCTTCCTCCCAAGACCAAGAGTATCAGGTGTGTCCTATT
TTTGTTAGGCCGGCGAGGGGCTTTGACCTTTGAGAGATGGAGTAAGTGTTCGTCCTCTTT
GCCCCTGCGAGTTATCCATTGATACATTTGGAATGCGAACCAAGAGGGGGAGTGAATTCT
AATGTC