Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010426_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:114527255:114533597:-1 gene:Zm00001d010426 gene_biotype:protein_coding transcript_biotype:protein_coding description:CER5

Sequence

ATGGACGGCGGCAGCGGAGGAGGGGAGGCGTGGCGCGGCGCGGTGTCGCCGGCAGCGCGG
TACGCGGAGTCCGGCGGCGCCAGCCTCACGTGGGAGAACCTCACGGCGGTGCTGCCGGGC
GGCGGCGGCCGGGCCACCAAGAAGCTGGTGCAGGGGCTGTACGGCTACGCCGTGCCCGGC
CGCGTCGTCGCCATCATGGGGCCTTCCGGCTCCGGCAAGTCCACACTCCTCGACTCCCTC
TCCGGGAGGCTGGCAAGGAACGTGGTCCTCACCGGGAAGGTGCTGCTCAACGGCAAGAAG
AGGCGGCTGGATTACGGCATCGTGGCATACGTGACCCAAGAGAACGTGCTGCTGGGCACG
CTGACGGTGCGCGAGACGGTGACCTACTCGGCCCTCCTCCGGCTGCCGTCGAGCACGCGC
AAGGCGGAGGTGCGGCGCATAGTGGACGAGACGCTGGACGAGATGGGCCTCCGGGAGTGC
GCCGACCGCCACATCGGGACGTGGCACCTCCGCGGCATCAGCGGCGGCGAGAAGAAGCGA
CTGAGCATCGCGCTGGAGATCCTCACCCGCCCGCGCCTCCTCTTCCTGGACGAGCCCACC
AGCGGCCTCGACAGCGCCGCCGCCTTCTCCGTCGTCCAGACGCTGCGGCAGCTCGCCGTC
GACGGCGGCCGCACCGTCGTCTCCTCCGTGCACCAGCCCAGCAGCGAGGTGTTCGCGCTC
TTCGACGACCTCTGCCTCCTCTCCAGCGGGGAGTGCGTCTACTTCGGTGACGCCAAGCTA
GCGACACAGTTCTTCGCGGAAACGGGGTTCCCCTGTCCCAGCCGGAGGAACCCGTCCGAC
CATTTCCTCCGGTGTGTCAACTCGGACTTCGATGATGTCGCCGCCACCATGAAAGGCTCC
ATGAAGCTGCGAGCAGAGGCAGAGCTCGATCCCCTGTTGAAGTACTCTACCTCAGAGATC
AGGGAACGGCTAGTGGACAAGTACAGGATCTCAGATTACGCCATGATGGTTAGGAGCACG
ATACACGAGATAACCAAGATTGAGGGTGTGATGGAGGATGTGATCCGTGGCAGCCAGGCG
AGCTGGTTGAAGCAGCTCCGCACGCTGACAAGCCGGTCCTTCACCAACATGTCCCGCGAT
CTGAACTACTACTGGCTGCGCATCATCATCTACATCGTGATGGCCATCTGCCTGGGAACC
ATCTACTACGACGTGGGCACCAGCTACACGGCCATCCAGGCGCGCGCCTCGTGCGGCGGC
TTCGTGTCGGGCTTCATGACCTTCATGTCCATCGGCGGCTTCCCGTCCTTCATCGAGGAG
ATGAAGGTGTTCACCCTCGAGCGCCAGAACGGACACTACGGCGTCGCCGCCTACATCATC
TCCAACTTCCTCTCCTCCATGCCGTTCCTGCTCGCCGTGTCCTGGGCCAGCGCGTCCATC
ACGTACTGGATGGTCAAGTTCCGGCCGGGCTTCAGCTACTTCGCCTTCTTCGCCCTCAAC
CTCTACGGCGGCGTCTCCGTCATCGAGAGCCTCATGATGATCATCTCCGCCCTCGTGCCA
AACTTCCTCATGGGCCTCATCCTTGGCGCCGGTGTCATAGGGATCATGATGTTGACCTCT
GGGTTCTTCCGACTGCTTCCGGAGCTCCCAAAGATCTTCTGGCGGTATCCAGTGTCCTAC
ATTGTCTATGGGTCATGGGGGTTGAAGGGCGGGTACAAGAACGACTTGATCGGGCTGGAG
TTCGAGCCGATGATGCCAGGGCAGCCGAAGCTGACCGGCGAGTACATCATCACCGAGATG
ATGGGGCTGAGCCTGAACCACTCCAAGTGGCTGGACCTCGCCATGATCTTCGTCCTCCTC
TTCGCCTACCGCCTCACCTTCTTCGTCGTGCTCAAGGTGAAGGAGGCCGCTGCGCCATAC
ATCCGCGTCGCCTACACACGATTCACCGTCAAGCGTCTCGAGCGGCGCGCCTCCTTCAGG
AAGACGCTGGCCATGGCGTCCATGTCCAAGCGGCACAACCCGCCGCACCCCATGGCCATC
CAGGAAGGACTCAGCTCGCCTATGCCGTACTGA

Peptide Sequence

PEP ID

Zm00001d010426_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:114527255:114533597:-1 gene:Zm00001d010426 transcript:Zm00001d010426_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CER5

Sequence

MDGGSGGGEAWRGAVSPAARYAESGGASLTWENLTAVLPGGGGRATKKLVQGLYGYAVPG
RVVAIMGPSGSGKSTLLDSLSGRLARNVVLTGKVLLNGKKRRLDYGIVAYVTQENVLLGT
LTVRETVTYSALLRLPSSTRKAEVRRIVDETLDEMGLRECADRHIGTWHLRGISGGEKKR
LSIALEILTRPRLLFLDEPTSGLDSAAAFSVVQTLRQLAVDGGRTVVSSVHQPSSEVFAL
FDDLCLLSSGECVYFGDAKLATQFFAETGFPCPSRRNPSDHFLRCVNSDFDDVAATMKGS
MKLRAEAELDPLLKYSTSEIRERLVDKYRISDYAMMVRSTIHEITKIEGVMEDVIRGSQA
SWLKQLRTLTSRSFTNMSRDLNYYWLRIIIYIVMAICLGTIYYDVGTSYTAIQARASCGG
FVSGFMTFMSIGGFPSFIEEMKVFTLERQNGHYGVAAYIISNFLSSMPFLLAVSWASASI
TYWMVKFRPGFSYFAFFALNLYGGVSVIESLMMIISALVPNFLMGLILGAGVIGIMMLTS
GFFRLLPELPKIFWRYPVSYIVYGSWGLKGGYKNDLIGLEFEPMMPGQPKLTGEYIITEM
MGLSLNHSKWLDLAMIFVLLFAYRLTFFVVLKVKEAAAPYIRVAYTRFTVKRLERRASFR
KTLAMASMSKRHNPPHPMAIQEGLSSPMPY

Transcript Sequence

Transcript ID

Zm00001d010426_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:114527255:114533597:-1 gene:Zm00001d010426 gene_biotype:protein_coding transcript_biotype:protein_coding description:CER5

Sequence

TGCTTCGCAACACCCACCGCTATGAATGCGTGATCTACTACCAGCACACAGTAGTGCCCC
CCACCCAACCACGGATTGAAACAGCTGCAGCCGAGCCTCCCTCCCTCCCTCCTCTCACAC
TAGCTCGTTCATCACAGAGACGGACAGATAGAAAGAGGAGGAGATGCATGAAGCCCAATC
TACGCTCCCACAGTAGGGATCCCTCCTCCATTAATAGGGGGGGATGCGTGTCGCGGCTAG
CCAAGCGACGACGCGAGCTGCCTCGCTCCTCTGGCCAGCCACTCCAGGTCCAGGGCGAGG
CGCCAGAGCTGCATCGCGCTGGCTAGCTAGCTAACTAGCCTGGGCGCCTAGCGCTAGAAG
AAACAGAGCTGAGTGGCGGGGTACAAGCGAGCGCGGTGGACAAAAGGCTAGCCAGAGAGA
CGATGGACGGCGGCAGCGGAGGAGGGGAGGCGTGGCGCGGCGCGGTGTCGCCGGCAGCGC
GGTACGCGGAGTCCGGCGGCGCCAGCCTCACGTGGGAGAACCTCACGGCGGTGCTGCCGG
GCGGCGGCGGCCGGGCCACCAAGAAGCTGGTGCAGGGGCTGTACGGCTACGCCGTGCCCG
GCCGCGTCGTCGCCATCATGGGGCCTTCCGGCTCCGGCAAGTCCACACTCCTCGACTCCC
TCTCCGGGAGGCTGGCAAGGAACGTGGTCCTCACCGGGAAGGTGCTGCTCAACGGCAAGA
AGAGGCGGCTGGATTACGGCATCGTGGCATACGTGACCCAAGAGAACGTGCTGCTGGGCA
CGCTGACGGTGCGCGAGACGGTGACCTACTCGGCCCTCCTCCGGCTGCCGTCGAGCACGC
GCAAGGCGGAGGTGCGGCGCATAGTGGACGAGACGCTGGACGAGATGGGCCTCCGGGAGT
GCGCCGACCGCCACATCGGGACGTGGCACCTCCGCGGCATCAGCGGCGGCGAGAAGAAGC
GACTGAGCATCGCGCTGGAGATCCTCACCCGCCCGCGCCTCCTCTTCCTGGACGAGCCCA
CCAGCGGCCTCGACAGCGCCGCCGCCTTCTCCGTCGTCCAGACGCTGCGGCAGCTCGCCG
TCGACGGCGGCCGCACCGTCGTCTCCTCCGTGCACCAGCCCAGCAGCGAGGTGTTCGCGC
TCTTCGACGACCTCTGCCTCCTCTCCAGCGGGGAGTGCGTCTACTTCGGTGACGCCAAGC
TAGCGACACAGTTCTTCGCGGAAACGGGGTTCCCCTGTCCCAGCCGGAGGAACCCGTCCG
ACCATTTCCTCCGGTGTGTCAACTCGGACTTCGATGATGTCGCCGCCACCATGAAAGGCT
CCATGAAGCTGCGAGCAGAGGCAGAGCTCGATCCCCTGTTGAAGTACTCTACCTCAGAGA
TCAGGGAACGGCTAGTGGACAAGTACAGGATCTCAGATTACGCCATGATGGTTAGGAGCA
CGATACACGAGATAACCAAGATTGAGGGTGTGATGGAGGATGTGATCCGTGGCAGCCAGG
CGAGCTGGTTGAAGCAGCTCCGCACGCTGACAAGCCGGTCCTTCACCAACATGTCCCGCG
ATCTGAACTACTACTGGCTGCGCATCATCATCTACATCGTGATGGCCATCTGCCTGGGAA
CCATCTACTACGACGTGGGCACCAGCTACACGGCCATCCAGGCGCGCGCCTCGTGCGGCG
GCTTCGTGTCGGGCTTCATGACCTTCATGTCCATCGGCGGCTTCCCGTCCTTCATCGAGG
AGATGAAGGTGTTCACCCTCGAGCGCCAGAACGGACACTACGGCGTCGCCGCCTACATCA
TCTCCAACTTCCTCTCCTCCATGCCGTTCCTGCTCGCCGTGTCCTGGGCCAGCGCGTCCA
TCACGTACTGGATGGTCAAGTTCCGGCCGGGCTTCAGCTACTTCGCCTTCTTCGCCCTCA
ACCTCTACGGCGGCGTCTCCGTCATCGAGAGCCTCATGATGATCATCTCCGCCCTCGTGC
CAAACTTCCTCATGGGCCTCATCCTTGGCGCCGGTGTCATAGGGATCATGATGTTGACCT
CTGGGTTCTTCCGACTGCTTCCGGAGCTCCCAAAGATCTTCTGGCGGTATCCAGTGTCCT
ACATTGTCTATGGGTCATGGGGGTTGAAGGGCGGGTACAAGAACGACTTGATCGGGCTGG
AGTTCGAGCCGATGATGCCAGGGCAGCCGAAGCTGACCGGCGAGTACATCATCACCGAGA
TGATGGGGCTGAGCCTGAACCACTCCAAGTGGCTGGACCTCGCCATGATCTTCGTCCTCC
TCTTCGCCTACCGCCTCACCTTCTTCGTCGTGCTCAAGGTGAAGGAGGCCGCTGCGCCAT
ACATCCGCGTCGCCTACACACGATTCACCGTCAAGCGTCTCGAGCGGCGCGCCTCCTTCA
GGAAGACGCTGGCCATGGCGTCCATGTCCAAGCGGCACAACCCGCCGCACCCCATGGCCA
TCCAGGAAGGACTCAGCTCGCCTATGCCGTACTGAGCTGAGCCGAGGCGAAGGAGAGAGC
GGAGGGAGACGGAAGTGGTGGTCGATATCACAGTTACTTGTGGATGTGCTTACAGATTTG
TCCGTTCCATTGTTTAGTTTGTCAGAGAGCGTTGTCAAAGATACCCCACGCGATAGTCGG
TCTTCAGAGCATTCGTTTCACTGTAATAACTCTGAACACCATACACATACAAGATAGTGC
TGCTGTGCGTACTTGTTTTTTTTTGTAAACATGAAACCAGGCAATGATCCTTATATTAAG
AAAGTCACGCAGTCAAAACTTACTTATTATTAA