Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010421_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:114332739:114337792:1 gene:Zm00001d010421 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich receptor-like protein kinase PERK1
Sequence

ATGTCGTCGTCGCCGACGGCCGCGCCGGCGCCGACCACGCCATCGGCTCCGCCGGCCAAC
GCGACAAATCCGCCGCCCGCGACCCCGTCCGCGCCGCCACCGGCGGCGCCCACGCCTCCC
ACGCCCACCCCGCCCACGCCGTCCCCGCCGTCCCCAGCCGCGCCGCCGCCGTCACCCCCC
TCCGTCCCGGCCCCCGCGCCGGCCTCCACCCCGGTGACTCCCTCTGCGCCCTCGCCCTCC
TCCCCTTCCTCCCCGGGCACGCCCGCCACCCCGTCGCCTCCATCGGACACCCCGTCGCCG
CCATCGTCCGGTGGAGGGGGCAGGTCCCCGCCGTCGTCTGGGGGTGGGCGATCCACGCCG
TCCTCCCACTCGCCTCCCAAGTCGCACTCGCCGGGGGGCGGTGGCGGCAGCTCCGGGCCG
TCTACGTCGCTCGTCGTGGGCGTGGCCGTCGGCGGCCTCGTGCTGCTGCTGCTCGCCAGC
TTCATCTGCCTCTGCTGCCTCCGCAAGAAGCGCCGCCGCGCGCCGCCGCCGCCGCCGCCT
CAGCACTACGGATACCCGCCGCCCCCGCCGCCGTACAAGGAGGATCCATACGGTGGAACG
TACCAGAGTTGGCAGCAAAATGCGCCTCCTGCTCCACCCCCTGAGCATGTGGTCAAGATG
CACCCTTCGCCTCCGCCAGCATATGCCAATCGTCCTCCACAGCCGCCAGTGCCACCACCA
CCAGCGATGCTAAATAGTAGTGGTGGATCTGGTTCTAATTACTCTGGTGGCGAGATCCTA
CCTCCACCATCCCCTGGTGCTGTTCTTGGCTTCTCGAAGAGCACATTCACCTACGAAGAG
CTGTTGAGGGCTACTGATGGATTCTCGGATGCTAATCTCCTTGGACAAGGTGGTTTTGGC
TATGTTCACAGAGGATTGCTGCCTAATGGCAAAGAGATTGCTGTAAAACAATTGAAACTG
GGAAGTGGCCAGGGAGAGCGTGAGTTCCAGGCTGAGGTTGAGATTATCAGCCGAGTACAT
CACAAACACCTTGTGTCTTTGGTTGGCTATTGCATTTCTGGAGGCAAGAGGCTGCTTGTC
TATGAGTTTGTCCCCAATAACACATTGGAATTCCACTTACATGCGAAAGGTCGACCAACA
ATGGAGTGGCCTGCTAGATTAAAGATCAGTTTGGGTGCTGCCAAGGGTTTAGCTTATCTT
CATGAAGACTGCCATCCAAAGATCATCCATCGTGACATAAAGGCATCTAACATTCTTCTT
GACTTCCAATTTGAAGCTAAGGTTGCTGATTTTGGACTTGCAAAGTTCACTACTGATAAC
AACACCCATGTTTCGACAAGAGTAATGGGCACCTTTGGGTATTTGGCACCTGAGTATGCA
TCTTCTGGCAAGCTAACAGAAAAATCCGATGTATTTTCCTTCGGAGTCATGCTTCTTGAG
CTTATTACTGGGCGGCGACCAGTTGACACAACCCAAACATATATGGATGACAGCTTGGTT
GACTGGGCAAGGCCATTACTGATGCGAGCACTTGAGGATGGTGAATATGATTCTTTAGTG
GATCCTCGGCTGGGAAAGGACTTCAATCCTAATGAGATGGCAAGAATGATAGCCTGTGCA
GCTGCATGTGTACGCCATTCTGCACGTCGTCGGCCACGTATGAGTCAGATTTTCATGTAT
TTACTTGGTGGATTAATAGCTTCTCACCTTATTGTTAAGGTCGTTCGGGCTTTGGAGGGC
AATGTGTCTTTGGAGGACCTTAATGAAGGTGTTCGGCCTGGCCATAGCCGCTTCTTTGGG
TCATACAGCAGCTCCGATTACGATTCTGGCCAGTACAACGAGGACATGAAGAAGTTCAAG
AAGATGGCATTCAACAACAACTATACCAGCAGCCAATACAGCGCGCCAACCAGTGAATAT
GGACAGATACCGTCTGCATCAAGCAGCGAGGGCCACCAGACGCAAGAGATGGAGTCGGGT
GCAATGAAGAAAGGTGGCTACAGTGGTGGCTACAGCTCAGGATACAGCGGAGCCTCGTAA

Peptide Sequence

PEP ID

Zm00001d010421_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:114332739:114337792:1 gene:Zm00001d010421 transcript:Zm00001d010421_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich receptor-like protein kinase PERK1
Sequence

MSSSPTAAPAPTTPSAPPANATNPPPATPSAPPPAAPTPPTPTPPTPSPPSPAAPPPSPP
SVPAPAPASTPVTPSAPSPSSPSSPGTPATPSPPSDTPSPPSSGGGGRSPPSSGGGRSTP
SSHSPPKSHSPGGGGGSSGPSTSLVVGVAVGGLVLLLLASFICLCCLRKKRRRAPPPPPP
QHYGYPPPPPPYKEDPYGGTYQSWQQNAPPAPPPEHVVKMHPSPPPAYANRPPQPPVPPP
PAMLNSSGGSGSNYSGGEILPPPSPGAVLGFSKSTFTYEELLRATDGFSDANLLGQGGFG
YVHRGLLPNGKEIAVKQLKLGSGQGEREFQAEVEIISRVHHKHLVSLVGYCISGGKRLLV
YEFVPNNTLEFHLHAKGRPTMEWPARLKISLGAAKGLAYLHEDCHPKIIHRDIKASNILL
DFQFEAKVADFGLAKFTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLE
LITGRRPVDTTQTYMDDSLVDWARPLLMRALEDGEYDSLVDPRLGKDFNPNEMARMIACA
AACVRHSARRRPRMSQIFMYLLGGLIASHLIVKVVRALEGNVSLEDLNEGVRPGHSRFFG
SYSSSDYDSGQYNEDMKKFKKMAFNNNYTSSQYSAPTSEYGQIPSASSSEGHQTQEMESG
AMKKGGYSGGYSSGYSGAS

Transcript Sequence

Transcript ID

Zm00001d010421_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:114332739:114337792:1 gene:Zm00001d010421 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich receptor-like protein kinase PERK1
Sequence

CATCGTCTCCTCCGTGCTCCACTTGCCCATTCTTACGCGCTAAGCAACAGGCCAGCCGGC
CGTAGCTCCAAAGCGGGAGCCGGAGCCGGAGCCGGAGCCGGGAGCTAAGGGGGGCCGTGA
TGTCGTCGTCGCCGACGGCCGCGCCGGCGCCGACCACGCCATCGGCTCCGCCGGCCAACG
CGACAAATCCGCCGCCCGCGACCCCGTCCGCGCCGCCACCGGCGGCGCCCACGCCTCCCA
CGCCCACCCCGCCCACGCCGTCCCCGCCGTCCCCAGCCGCGCCGCCGCCGTCACCCCCCT
CCGTCCCGGCCCCCGCGCCGGCCTCCACCCCGGTGACTCCCTCTGCGCCCTCGCCCTCCT
CCCCTTCCTCCCCGGGCACGCCCGCCACCCCGTCGCCTCCATCGGACACCCCGTCGCCGC
CATCGTCCGGTGGAGGGGGCAGGTCCCCGCCGTCGTCTGGGGGTGGGCGATCCACGCCGT
CCTCCCACTCGCCTCCCAAGTCGCACTCGCCGGGGGGCGGTGGCGGCAGCTCCGGGCCGT
CTACGTCGCTCGTCGTGGGCGTGGCCGTCGGCGGCCTCGTGCTGCTGCTGCTCGCCAGCT
TCATCTGCCTCTGCTGCCTCCGCAAGAAGCGCCGCCGCGCGCCGCCGCCGCCGCCGCCTC
AGCACTACGGATACCCGCCGCCCCCGCCGCCGTACAAGGAGGATCCATACGGTGGAACGT
ACCAGAGTTGGCAGCAAAATGCGCCTCCTGCTCCACCCCCTGAGCATGTGGTCAAGATGC
ACCCTTCGCCTCCGCCAGCATATGCCAATCGTCCTCCACAGCCGCCAGTGCCACCACCAC
CAGCGATGCTAAATAGTAGTGGTGGATCTGGTTCTAATTACTCTGGTGGCGAGATCCTAC
CTCCACCATCCCCTGGTGCTGTTCTTGGCTTCTCGAAGAGCACATTCACCTACGAAGAGC
TGTTGAGGGCTACTGATGGATTCTCGGATGCTAATCTCCTTGGACAAGGTGGTTTTGGCT
ATGTTCACAGAGGATTGCTGCCTAATGGCAAAGAGATTGCTGTAAAACAATTGAAACTGG
GAAGTGGCCAGGGAGAGCGTGAGTTCCAGGCTGAGGTTGAGATTATCAGCCGAGTACATC
ACAAACACCTTGTGTCTTTGGTTGGCTATTGCATTTCTGGAGGCAAGAGGCTGCTTGTCT
ATGAGTTTGTCCCCAATAACACATTGGAATTCCACTTACATGCGAAAGGTCGACCAACAA
TGGAGTGGCCTGCTAGATTAAAGATCAGTTTGGGTGCTGCCAAGGGTTTAGCTTATCTTC
ATGAAGACTGCCATCCAAAGATCATCCATCGTGACATAAAGGCATCTAACATTCTTCTTG
ACTTCCAATTTGAAGCTAAGGTTGCTGATTTTGGACTTGCAAAGTTCACTACTGATAACA
ACACCCATGTTTCGACAAGAGTAATGGGCACCTTTGGGTATTTGGCACCTGAGTATGCAT
CTTCTGGCAAGCTAACAGAAAAATCCGATGTATTTTCCTTCGGAGTCATGCTTCTTGAGC
TTATTACTGGGCGGCGACCAGTTGACACAACCCAAACATATATGGATGACAGCTTGGTTG
ACTGGGCAAGGCCATTACTGATGCGAGCACTTGAGGATGGTGAATATGATTCTTTAGTGG
ATCCTCGGCTGGGAAAGGACTTCAATCCTAATGAGATGGCAAGAATGATAGCCTGTGCAG
CTGCATGTGTACGCCATTCTGCACGTCGTCGGCCACGTATGAGTCAGATTTTCATGTATT
TACTTGGTGGATTAATAGCTTCTCACCTTATTGTTAAGGTCGTTCGGGCTTTGGAGGGCA
ATGTGTCTTTGGAGGACCTTAATGAAGGTGTTCGGCCTGGCCATAGCCGCTTCTTTGGGT
CATACAGCAGCTCCGATTACGATTCTGGCCAGTACAACGAGGACATGAAGAAGTTCAAGA
AGATGGCATTCAACAACAACTATACCAGCAGCCAATACAGCGCGCCAACCAGTGAATATG
GACAGATACCGTCTGCATCAAGCAGCGAGGGCCACCAGACGCAAGAGATGGAGTCGGGTG
CAATGAAGAAAGGTGGCTACAGTGGTGGCTACAGCTCAGGATACAGCGGAGCCTCGTAA