Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010411_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:8:113493054:113496477:-1 gene:Zm00001d010411 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 38 description:Auxin-responsive protein IAA27
Sequence

ATGTCGCCTCCACTCGAGCTCGACTACATAGGCCTCTCGCCGCCGGCGGCAGCCGCCGCC
GCTGAAAACGACGAACTGAAGGGTACTGAGCTCCGCCTCGGGCTGCCAGGGTCCGGGTCG
CCGGACCGCCGTGTCGTGGCTGCCACCGCGACCACCCTGGACCTGCTCCCGGCCAAGGGC
GCCAAGCGCGGGTTTTCTGACGAGGCGCCCCCGCCATCGCCTGTTGCCACTGCCGGAAAG
GGAAAGAAGGTGGCAGAAGAGGAGTACGACGAGAAGAAGGTGGCAGCGACCCCGCAGCCG
GCCGCCAAAGCACAGGTGGTGGGATGGCCACCAGTCTGCAACTACCGCAAGAACACGATG
ACTACCACCCAGCTGGAGGGCAGCAAGGAGGATGGTGATGCCAAGCAGGGTCAGGGGTTC
CTGTACGTCAAGGTCAGCATGGATGGCGCGCCGTACCTCAGGAAGATCGACCTCAAGACT
TACAAGAACTACAAGGACCTGTCGACCGCGCTTGAGAAGATGTTCAGTGGCTTCAGTACT
GGCAAGGACGGCTCATCTGAGTACCGCAAGGATGGTGAATATGTTCTGACTTACGAGGAC
AAGGATGGAGATTGGATGCTTGTCGGCGACGTACCATGGGAGTGA

Peptide Sequence

PEP ID

Zm00001d010411_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:8:113493054:113496477:-1 gene:Zm00001d010411 transcript:Zm00001d010411_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 38 description:Auxin-responsive protein IAA27
Sequence

MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKG
AKRGFSDEAPPPSPVATAGKGKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTM
TTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKTYKNYKDLSTALEKMFSGFST
GKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWE

Transcript Sequence

Transcript ID

Zm00001d010411_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:113493054:113496477:-1 gene:Zm00001d010411 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 38 description:Auxin-responsive protein IAA27
Sequence

GGCTCCGACTCGCACTCTTTCCCCTTCCCTTCCCTTCCCACTCCCAGGCTCCCACTCTCA
CCCCTTCCGCCTACCCACGCAAACGGCACACGAACTAACAGCCACCTCTCACGTCCCCCA
CCCTCTGGTTCATGTCCTGCTGCTCCCCATGTCGCCTCCACTCGAGCTCGACTACATAGG
CCTCTCGCCGCCGGCGGCAGCCGCCGCCGCTGAAAACGACGAACTGAAGGGTACTGAGCT
CCGCCTCGGGCTGCCAGGGTCCGGGTCGCCGGACCGCCGTGTCGTGGCTGCCACCGCGAC
CACCCTGGACCTGCTCCCGGCCAAGGGCGCCAAGCGCGGGTTTTCTGACGAGGCGCCCCC
GCCATCGCCTGTTGCCACTGCCGGAAAGGGAAAGAAGGTGGCAGAAGAGGAGTACGACGA
GAAGAAGGTGGCAGCGACCCCGCAGCCGGCCGCCAAAGCACAGGTGGTGGGATGGCCACC
AGTCTGCAACTACCGCAAGAACACGATGACTACCACCCAGCTGGAGGGCAGCAAGGAGGA
TGGTGATGCCAAGCAGGGTCAGGGGTTCCTGTACGTCAAGGTCAGCATGGATGGCGCGCC
GTACCTCAGGAAGATCGACCTCAAGACTTACAAGAACTACAAGGACCTGTCGACCGCGCT
TGAGAAGATGTTCAGTGGCTTCAGTACTGGCAAGGACGGCTCATCTGAGTACCGCAAGGA
TGGTGAATATGTTCTGACTTACGAGGACAAGGATGGAGATTGGATGCTTGTCGGCGACGT
ACCATGGGAGTGAGTTACACGCTCAGGATCATGAAAGGCTCAGATGCGATTGGACTCGCT
CCAAGGGCAGCCGATAAGTCCAAGAACCGCAACTAGAACGGTGGCTTCCTATCCTTACAC
AGTCCGGTACGAGGGAGGAGATGCAGTGACTTGTAGGGATCTGTACGAAAACCGAAAAAG
TCTACTAACAGCTATGACTTGTGAGAAGAATTCTGGCTTATGGTCTGCACTAGAATGGCT
TGGTACATCGTCTATGGACAAAACACGCTATTCGATTAATTGTTG