Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010403_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:113059177:113063728:-1 gene:Zm00001d010403 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	ATGGACATGGACAGGGACAGCGTGGAGTGCCTCTCCCTCCCAGACGCTGCCATGGACGTG GACAACGTCGACGGCCACCCGCACCACGGCCATCTCGGTCTCCCGCTCCACCCCGCCCAC CTCCCATCCTCTGGTGCCGGGCGCGCGTTCCCCAAGGTGAATGCCGGGGGCGGCGGAGCG GGCCCGGCTGTAGCGGGAGCGGCGGGCGCAGCAGGAGCAGGCGGAGGGCCGCCGGCGACC AGCGTGCACGAGCTGCTCGAGTGCCCCGTCTGCACTAACTCCATGTTCCCGCCCATCCAT CAGTGTCAAAATGGACATACTTTGTGTTCGACATGCAAGGCCAGGGTGCACAACCGGTGC CCTACATGCAGACAAGAGCTTGGTGATATCAGGTGCTTAGCATTGGAAAAAGTAGCAGAG TCACTTGAGCTTCCATGTAAGTACTGCTCTTTAGGTTGCCCAGAGATCTTCCCGTACTAC AGCAAGATAAAGCATGAAGCACAGTGCAGCTTCAGGCCATATAACTGCCCCTATGCTGGC TCTGAATGTGCTGTGGCTGGTGATATTCCATTCCTTGTTGCACATTTGAGGGATGATCAC AAAGTTGATATGCACAGTGGCTGCACGTTCAACCATAGATACGTCAAATCCAACCCGCGA GAGGTTGAAAATGCCACCTGGATGCTAACAGTATTCCATTGTTTTGGGCAGTACTTCTGC CTGCACTTCGAGGCATTCCAGCTCGGAATGGCTCCAGTCTATATGGCTTTCCTCCGATTC ATGGGTGATGAGAATGAAGCAAGGAACTATACATATAGCCTAGAGGTTGGTGGTAATGGG AGGAAAATGGTATGGGAAGGTACTCCTAGAAGCATCCGTGACAGCCACCGCAAGGTCCGT GACAGCCATGATGGCCTCATCATCCAGAGGAATATGGCGCTGTTCTTCTCTGGTGGTGAC AGGAAGGAGCTGAAGCTGAGGGTGACTGGGCGGATCTGGAAAGAGCAGACGAACCCCGAT GGAGCCTGCATTCCTAACCTTTGCAGCTGA

Peptide Sequence

PEP ID	Zm00001d010403_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:113059177:113063728:-1 gene:Zm00001d010403 transcript:Zm00001d010403_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	MDMDRDSVECLSLPDAAMDVDNVDGHPHHGHLGLPLHPAHLPSSGAGRAFPKVNAGGGGA GPAVAGAAGAAGAGGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRC PTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAG SECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC LHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVR DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS

Transcript Sequence

Transcript ID	Zm00001d010403_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:113059177:113063728:-1 gene:Zm00001d010403 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	AATCCAGGCGAAACAAACGGCGTGACGAGAGCGGCAGAGCGTCAGCGTCCCCCCGCGGCC ACCGTACCGCATCGTCGTCGTCCCCAGCCAACCCAACCCAGCGCACCCCAAACGAATCCA GCCCCACCTCAGCCGCGGCGCGGACCTCGGAATCTCAGCGCCGGTGTGCTCACGGCACCG CAGGGCGCGGCGTGGCCATGGACATGGACAGGGACAGCGTGGAGTGCCTCTCCCTCCCAG ACGCTGCCATGGACGTGGACAACGTCGACGGCCACCCGCACCACGGCCATCTCGGTCTCC CGCTCCACCCCGCCCACCTCCCATCCTCTGGTGCCGGGCGCGCGTTCCCCAAGGTGAATG CCGGGGGCGGCGGAGCGGGCCCGGCTGTAGCGGGAGCGGCGGGCGCAGCAGGAGCAGGCG GAGGGCCGCCGGCGACCAGCGTGCACGAGCTGCTCGAGTGCCCCGTCTGCACTAACTCCA TGTTCCCGCCCATCCATCAGTGTCAAAATGGACATACTTTGTGTTCGACATGCAAGGCCA GGGTGCACAACCGGTGCCCTACATGCAGACAAGAGCTTGGTGATATCAGGTGCTTAGCAT TGGAAAAAGTAGCAGAGTCACTTGAGCTTCCATGTAAGTACTGCTCTTTAGGTTGCCCAG AGATCTTCCCGTACTACAGCAAGATAAAGCATGAAGCACAGTGCAGCTTCAGGCCATATA ACTGCCCCTATGCTGGCTCTGAATGTGCTGTGGCTGGTGATATTCCATTCCTTGTTGCAC ATTTGAGGGATGATCACAAAGTTGATATGCACAGTGGCTGCACGTTCAACCATAGATACG TCAAATCCAACCCGCGAGAGGTTGAAAATGCCACCTGGATGCTAACAGTATTCCATTGTT TTGGGCAGTACTTCTGCCTGCACTTCGAGGCATTCCAGCTCGGAATGGCTCCAGTCTATA TGGCTTTCCTCCGATTCATGGGTGATGAGAATGAAGCAAGGAACTATACATATAGCCTAG AGGTTGGTGGTAATGGGAGGAAAATGGTATGGGAAGGTACTCCTAGAAGCATCCGTGACA GCCACCGCAAGGTCCGTGACAGCCATGATGGCCTCATCATCCAGAGGAATATGGCGCTGT TCTTCTCTGGTGGTGACAGGAAGGAGCTGAAGCTGAGGGTGACTGGGCGGATCTGGAAAG AGCAGACGAACCCCGATGGAGCCTGCATTCCTAACCTTTGCAGCTGAGCAAGGGAGACGA TTGAAAAGAAGAAGAAAAAAAAGAAAGAAAATATTGTGTTATTTGGCTGGCTTTTTTAAA AAATTGTCATGCTATGTTTTCATTATAGCCTGCTGTTAAAATATTGTACCAGTATGTAGG GTGTAAAATGCTCTTGTAAAGTAATTGTGTATATCGAATTCATTTACAAGTTGTACCACC AATCCCTGTGTTATGTTGATGTGTTGTTTGAGTTCCGTTGTGGATGTATTGGGCTC