Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010398_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:112852206:112854080:-1 gene:Zm00001d010398 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GDP-dissociation inhibitor 1

Sequence

ATGGACGATCAGGAGAACGAGCACGAGAAGCATGCTGATGCTGGGACTGACGTCGACGAA
GAAGAGGAGGACGAAGATGGCCACAAGCGTGTCGTCGTTCTTGGACCCCAAGTCCCCCTC
AAGGAACAGCTCGAGCTTGACAAGGATGATGAGAGCCTGAGGAGGTGGAAGGAGCAACTC
CTCGGGCAAGTCGACACCGAGCAGCTCGGAGAGACTGCGGAGCCGGAGGTGAAGGTGCTC
AACCTGACCATCCTGTCACCGGGGCGGCCAGATCTAGTGCTACCGATCCCGTTCGAGGCC
GACGACAAGGGCTATGCGTTTACGCTCAAGGATGGCAGCCTCTATAGCTTCCGTTTCTCC
TTCACCGTCTCCAACAACATCGTTTCAGGCCTCAAGTACACCAACACGGTCTGGAAGACT
GGAGTCAAAGTGGAGAACCAGAAAATGATGCTAGGGACATTCAGTCCCCAGCAAGAGCCG
TACGTTTACGAGGGTGAAGAAGAGACCACACCTGCTGGCATCTTCGCAAGAGGTTCCTAT
TCTGCTAAGCTAAAGTTTTTTGATGATGATGGCAAGTGTTATTTGGAGACGAGTTACTAC
TTTGAGATTAGAAAAGAGTGGCCAGGGCCAGCAACCTAA

Peptide Sequence

PEP ID

Zm00001d010398_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:112852206:112854080:-1 gene:Zm00001d010398 transcript:Zm00001d010398_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GDP-dissociation inhibitor 1

Sequence

MDDQENEHEKHADAGTDVDEEEEDEDGHKRVVVLGPQVPLKEQLELDKDDESLRRWKEQL
LGQVDTEQLGETAEPEVKVLNLTILSPGRPDLVLPIPFEADDKGYAFTLKDGSLYSFRFS
FTVSNNIVSGLKYTNTVWKTGVKVENQKMMLGTFSPQQEPYVYEGEEETTPAGIFARGSY
SAKLKFFDDDGKCYLETSYYFEIRKEWPGPAT

Transcript Sequence

Transcript ID

Zm00001d010398_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:112852206:112854080:-1 gene:Zm00001d010398 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GDP-dissociation inhibitor 1

Sequence

ACACTTTCCAAACCCTACGCACCACCATTATATTGATCGATCTATGCTGCTGCTGGTCGC
AACCGCACCGCAGCTTCACGGGCCGCCCTCTCCCAAAAATCGAGCACCAGAGTGTTTCAA
TTCCTTCTCCATATATTGTTGGTGTTAGTTTCCTGCTTTCCCTAGTCCCTCGCAATCAAC
AGATACCTCATGGACGATCAGGAGAACGAGCACGAGAAGCATGCTGATGCTGGGACTGAC
GTCGACGAAGAAGAGGAGGACGAAGATGGCCACAAGCGTGTCGTCGTTCTTGGACCCCAA
GTCCCCCTCAAGGAACAGCTCGAGCTTGACAAGGATGATGAGAGCCTGAGGAGGTGGAAG
GAGCAACTCCTCGGGCAAGTCGACACCGAGCAGCTCGGAGAGACTGCGGAGCCGGAGGTG
AAGGTGCTCAACCTGACCATCCTGTCACCGGGGCGGCCAGATCTAGTGCTACCGATCCCG
TTCGAGGCCGACGACAAGGGCTATGCGTTTACGCTCAAGGATGGCAGCCTCTATAGCTTC
CGTTTCTCCTTCACCGTCTCCAACAACATCGTTTCAGGCCTCAAGTACACCAACACGGTC
TGGAAGACTGGAGTCAAAGTGGAGAACCAGAAAATGATGCTAGGGACATTCAGTCCCCAG
CAAGAGCCGTACGTTTACGAGGGTGAAGAAGAGACCACACCTGCTGGCATCTTCGCAAGA
GGTTCCTATTCTGCTAAGCTAAAGTTTTTTGATGATGATGGCAAGTGTTATTTGGAGACG
AGTTACTACTTTGAGATTAGAAAAGAGTGGCCAGGGCCAGCAACCTAATGATATGGAGCG
GCGGTGTTGGATTCGTTAAATGCATACATGTTAGAACTCTTAGTTAAGACGAGCAGAAGA
TCTATTATATTCTACTGCTTCAATTCTAGCTAGAGGATGATTGCTTCACATGCATATCGT
CATGTTTAACCACCGTACGTATAATTTGTTTCGAGTCCATTATTCTACGCTATTTGCGTA
TTATTATTGTTAATTCACATTATAGAATCAGTCGTGTATGGAGATTCAAAGATATATTTA
TATACTTATGAGCTTCTTATTGAACATTTGTCGGTCCTGTATGTGGTCACTTTTGCTATC
ATTTATATT