Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010141_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:8:101171503:101176771:1 gene:Zm00001d010141 gene_biotype:protein_coding transcript_biotype:protein_coding description:sec23/sec24 transport family protein
Sequence

ATGTCTGCTTTAATTGAGTACCTAAGTTCAGAATATGGTTCTACTTTTGCTTTAGCTGGT
GTGCTAGATACCAGGAGATATGGGGAGCAATATGCTAGTAAAGGGGTAGACGCTGATCTT
GCGTTGCTCCCTGAACAGATACCTTTCTACAGAGACCTAGCAGCTGTTGCTGTTCAGTCA
GGAGTATGCATAGACATATTTGCTGTAACTGATGAATACACTGATTTGGCTTCACTGAAG
TTTTTAAGTATCGAAAGTGGTGGATCTTTATTTCTTTATGCAAGTACAGATGATTCAACA
GTTCCCCAAGACATATACCGATTGCTAAGTCGACCCTATGCATTTGGTTGTGTTCTAAGG
CTGAGAACATCTTCAGATTTTGAGCCGGGCAATTCTTATGGGCATTTCTTCCCTGACCCT
CAATATGAAAATGTGCAACACATCATCTGCTGTGATTCATTTGCCACTTATGCATATGAC
TTTGAGTTTGCCCATAACGACGGTTTCTCCAGGCACACAGATCCTGCTGTTGTACAGATT
GCTTTTCAGTACAGCGTGATTGAACCTGTCAAGGAAACATCAGGCAATGGATCACAACCA
TCTGCAAGTTACAAGTTCTGTCTGAAGAGACGGTTGAGAATAAGAACATTGCAGTACCGT
CCAACTAATAATATCAGCGAAATTTATGACAGTGTAGATCCAGAGGTTGTCCTGCATATC
CTTGTTCATAAGGTTATTTTAGAATCCTTGGATAAAGGGGTTAGAGAAGGCAGGCATCAA
GTGCATGCTTGGCTATCCCTCCTTGCAGCCCGGTATAATCAGGCCCTGAGTTCTGATGTG
CGACCGCTGTCAAGCATAGACATTGACTTCTCACAGTGCCCACAGCTTCAAACGATACCT
CAGCTTGTTTTTGCATTGTTGAGAAGTCCTCTTCTTCGCTTGCATGAGGAAGGCGTGCAC
CCAGATTACAGGATATATCTACAATGCCTTTTCAGTGCACTGGAGCCATCATCTGTAGCT
AAAGCCATATATCCGGTTTTAATCTCGTATTCCTCGCCTGACAAGCAAGCATTCCCACGG
CACACTCTGAGCCATGCTGCTCTAATCATGAGCGAGAGCCCAATATTTCTTCTCGACACA
TTTACCAACCTTATTGTTTACTATTCCTCAACTGCTGATCCTTCAGTTCCTTTTCCTCCA
CCCCATGACTGCCTTTTGAGAAAAACAATAAATGGACTGAAGCAGGACAGATGTATAACC
CCCAAGCTTACATTCATCCATGGAGGGAAAGATGATTCAACATTGTTTGAGAGCTATCTC
ATTGAAGAGCAAGATGTTGATGGATCGGGCTTAACAACTGGTTCAGGTTTTGTAGCCTTC
CGTGAGAGCGTGAGGAACGTTGCAGGAGAGATCATACAGGAAGAAATTGGAAGTTAG

Peptide Sequence

PEP ID

Zm00001d010141_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:8:101171503:101176771:1 gene:Zm00001d010141 transcript:Zm00001d010141_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:sec23/sec24 transport family protein
Sequence

MSALIEYLSSEYGSTFALAGVLDTRRYGEQYASKGVDADLALLPEQIPFYRDLAAVAVQS
GVCIDIFAVTDEYTDLASLKFLSIESGGSLFLYASTDDSTVPQDIYRLLSRPYAFGCVLR
LRTSSDFEPGNSYGHFFPDPQYENVQHIICCDSFATYAYDFEFAHNDGFSRHTDPAVVQI
AFQYSVIEPVKETSGNGSQPSASYKFCLKRRLRIRTLQYRPTNNISEIYDSVDPEVVLHI
LVHKVILESLDKGVREGRHQVHAWLSLLAARYNQALSSDVRPLSSIDIDFSQCPQLQTIP
QLVFALLRSPLLRLHEEGVHPDYRIYLQCLFSALEPSSVAKAIYPVLISYSSPDKQAFPR
HTLSHAALIMSESPIFLLDTFTNLIVYYSSTADPSVPFPPPHDCLLRKTINGLKQDRCIT
PKLTFIHGGKDDSTLFESYLIEEQDVDGSGLTTGSGFVAFRESVRNVAGEIIQEEIGS

Transcript Sequence

Transcript ID

Zm00001d010141_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:101171503:101176771:1 gene:Zm00001d010141 gene_biotype:protein_coding transcript_biotype:protein_coding description:sec23/sec24 transport family protein
Sequence

TGACACATGCAAGGATCAAATTGCTGCTGTCCTGGAGACACTGCGACCTACATCTTCATG
GGAGAGAGGGGTTGCTTCTGGGCAGGAAGAGGATACTGTTTTGCTTGGCAGACGTGGTTT
TGGGACAGCCATGTCTGCTTTAATTGAGTACCTAAGTTCAGAATATGGTTCTACTTTTGC
TTTAGCTGGTGTGCTAGATACCAGGAGATATGGGGAGCAATATGCTAGTAAAGGGGTAGA
CGCTGATCTTGCGTTGCTCCCTGAACAGATACCTTTCTACAGAGACCTAGCAGCTGTTGC
TGTTCAGTCAGGAGTATGCATAGACATATTTGCTGTAACTGATGAATACACTGATTTGGC
TTCACTGAAGTTTTTAAGTATCGAAAGTGGTGGATCTTTATTTCTTTATGCAAGTACAGA
TGATTCAACAGTTCCCCAAGACATATACCGATTGCTAAGTCGACCCTATGCATTTGGTTG
TGTTCTAAGGCTGAGAACATCTTCAGATTTTGAGCCGGGCAATTCTTATGGGCATTTCTT
CCCTGACCCTCAATATGAAAATGTGCAACACATCATCTGCTGTGATTCATTTGCCACTTA
TGCATATGACTTTGAGTTTGCCCATAACGACGGTTTCTCCAGGCACACAGATCCTGCTGT
TGTACAGATTGCTTTTCAGTACAGCGTGATTGAACCTGTCAAGGAAACATCAGGCAATGG
ATCACAACCATCTGCAAGTTACAAGTTCTGTCTGAAGAGACGGTTGAGAATAAGAACATT
GCAGTACCGTCCAACTAATAATATCAGCGAAATTTATGACAGTGTAGATCCAGAGGTTGT
CCTGCATATCCTTGTTCATAAGGTTATTTTAGAATCCTTGGATAAAGGGGTTAGAGAAGG
CAGGCATCAAGTGCATGCTTGGCTATCCCTCCTTGCAGCCCGGTATAATCAGGCCCTGAG
TTCTGATGTGCGACCGCTGTCAAGCATAGACATTGACTTCTCACAGTGCCCACAGCTTCA
AACGATACCTCAGCTTGTTTTTGCATTGTTGAGAAGTCCTCTTCTTCGCTTGCATGAGGA
AGGCGTGCACCCAGATTACAGGATATATCTACAATGCCTTTTCAGTGCACTGGAGCCATC
ATCTGTAGCTAAAGCCATATATCCGGTTTTAATCTCGTATTCCTCGCCTGACAAGCAAGC
ATTCCCACGGCACACTCTGAGCCATGCTGCTCTAATCATGAGCGAGAGCCCAATATTTCT
TCTCGACACATTTACCAACCTTATTGTTTACTATTCCTCAACTGCTGATCCTTCAGTTCC
TTTTCCTCCACCCCATGACTGCCTTTTGAGAAAAACAATAAATGGACTGAAGCAGGACAG
ATGTATAACCCCCAAGCTTACATTCATCCATGGAGGGAAAGATGATTCAACATTGTTTGA
GAGCTATCTCATTGAAGAGCAAGATGTTGATGGATCGGGCTTAACAACTGGTTCAGGTTT
TGTAGCCTTCCGTGAGAGCGTGAGGAACGTTGCAGGAGAGATCATACAGGAAGAAATTGG
AAGTTAGTTCCAGCTCGATTACCTTTTTGGTTCTGCTGCAGAGGGTATCGACTAGGATGT
TTTAGCCTTAATTAATGCCGTAGCAGTTAACTGAAACGTAGATAGCCAAAATGGAGAGAC
AATTCAATGAATAATAAAAGGAGGCCACTTGATGTATAGTTGCTTCTGTCAACAACTGCT
TTAGGCTTGACTAGGCAGAGCAGCCTTTCTGGTACAGCGGCACTGTCTGTCTCTATGCTA
AAACAGACGAGTTTTACTACACAATAATACACCGTCGGAACCTGGCAGACTGAAATTTGA
G